Search of human proteins with 7710152

Search of human proteins with 7710152

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7710152 alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo sapiens]
         (548 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...  1109   0.0  
gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...  1045   0.0  
gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   648   0.0  
gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   540   e-153
gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   211   1e-54
gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]           70   6e-12
gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]           70   6e-12
gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]           70   6e-12
gi|9910270 olfactomedin-like 3 [Homo sapiens]                          39   0.009
gi|194328806 nuclear receptor subfamily 1, group H, member 3 iso...    33   0.88 
gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform...    31   3.3  
gi|21361127 potassium inwardly-rectifying channel J15 [Homo sapi...    30   5.7  
gi|25777640 potassium inwardly-rectifying channel J15 [Homo sapi...    30   5.7  
gi|25777638 potassium inwardly-rectifying channel J15 [Homo sapi...    30   5.7  
gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1 i...    30   7.5  
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is...    30   7.5  
gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a...    29   9.7  
gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform...    29   9.7  
gi|148539600 ubiquitin specific protease 53 [Homo sapiens]             29   9.7  

>gi|7710152 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo
           sapiens]
          Length = 548

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 548/548 (100%), Positives = 548/548 (100%)

Query: 1   MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKR 60
           MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKR
Sbjct: 1   MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKR 60

Query: 61  SKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLP 120
           SKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLP
Sbjct: 61  SKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLP 120

Query: 121 HLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVI 180
           HLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVI
Sbjct: 121 HLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVI 180

Query: 181 VVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVR 240
           VVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVR
Sbjct: 181 VVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVR 240

Query: 241 WRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQL 300
           WRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQL
Sbjct: 241 WRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQL 300

Query: 301 GFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 360
           GFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR
Sbjct: 301 GFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 360

Query: 361 FKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYL 420
           FKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYL
Sbjct: 361 FKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYL 420

Query: 421 REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDK 480
           REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDK
Sbjct: 421 REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDK 480

Query: 481 EALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILS 540
           EALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILS
Sbjct: 481 EALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILS 540

Query: 541 EIFLKKAD 548
           EIFLKKAD
Sbjct: 541 EIFLKKAD 548


>gi|16915936 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo
           sapiens]
          Length = 563

 Score = 1045 bits (2701), Expect = 0.0
 Identities = 516/516 (100%), Positives = 516/516 (100%)

Query: 33  GDVVDVYQREFLALRDRLHAAEQESLKRSKELNLVLDEIKRAVSERQALRDGDGNRTWGR 92
           GDVVDVYQREFLALRDRLHAAEQESLKRSKELNLVLDEIKRAVSERQALRDGDGNRTWGR
Sbjct: 48  GDVVDVYQREFLALRDRLHAAEQESLKRSKELNLVLDEIKRAVSERQALRDGDGNRTWGR 107

Query: 93  LTEDPRLKPWNGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGIPSVR 152
           LTEDPRLKPWNGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGIPSVR
Sbjct: 108 LTEDPRLKPWNGSHRHVLHLPTVFHHLPHLLAKESSLQPAVRVGQGRTGVSVVMGIPSVR 167

Query: 153 REVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLL 212
           REVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLL
Sbjct: 168 REVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLL 227

Query: 213 EVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVA 272
           EVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVA
Sbjct: 228 EVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVA 287

Query: 273 KPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLL 332
           KPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLL
Sbjct: 288 KPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLL 347

Query: 333 DHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQAL 392
           DHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQAL
Sbjct: 348 DHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQAL 407

Query: 393 RKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFR 452
           RKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFR
Sbjct: 408 RKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFR 467

Query: 453 SGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAE 512
           SGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAE
Sbjct: 468 SGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAE 527

Query: 513 GEVDPAFGPLEALRLSIQTDSPVWVILSEIFLKKAD 548
           GEVDPAFGPLEALRLSIQTDSPVWVILSEIFLKKAD
Sbjct: 528 GEVDPAFGPLEALRLSIQTDSPVWVILSEIFLKKAD 563


>gi|6912502 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo
           sapiens]
          Length = 535

 Score =  648 bits (1671), Expect = 0.0
 Identities = 332/547 (60%), Positives = 399/547 (72%), Gaps = 14/547 (2%)

Query: 1   MRLRNGTFLTLLLFCLCAFLSLSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKR 60
           MRLRNGT  T L F + +FL+LSWY      K  ++  YQREFLAL++RL  AE    +R
Sbjct: 1   MRLRNGTVATALAF-ITSFLTLSWYTTWQNGKEKLI-AYQREFLALKERLRIAEHRISQR 58

Query: 61  SKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLP 120
           S ELN ++ + KR  +E    +D     +   L     L     + +  L +P++++HLP
Sbjct: 59  SSELNTIVQQFKRVGAETNGSKDALNKFSDNTLKLLKEL-----TSKKSLQVPSIYYHLP 113

Query: 121 HLLAKESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVI 180
           HLL  E SLQPAV++G GRTGVS+VMGIP+V+REV SYL +TLHSLI  L P+EK D VI
Sbjct: 114 HLLKNEGSLQPAVQIGNGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVI 173

Query: 181 VVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVR 240
           VV I ETD  Y   V  N++  F  EI SGL+EVISP   +YPD + L+E+FGD KERVR
Sbjct: 174 VVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVR 233

Query: 241 WRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQL 300
           WRTKQNLDYCFLMMYAQ KGIYY+QLEDDI+ K NY +T+KNFALQ  SE+WMILEFSQL
Sbjct: 234 WRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQL 293

Query: 301 GFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 360
           GFIGKMF++ DL+LIVEFI MFY++KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR
Sbjct: 294 GFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIR 353

Query: 361 FKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYL 420
           F+PSLFQHVG HSSL+GKIQKL DKD+ K  L K HVNPPAEVSTSLK YQ  TLEK Y+
Sbjct: 354 FRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYM 413

Query: 421 REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDK 480
            EDFFWA TP AGD+I F+F +P+ +E + F SGN EHP D L NT+VEVLPF +     
Sbjct: 414 GEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKS----- 468

Query: 481 EALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILS 540
           E L+  +    +  R  DGY +IG F  GVAEG VDP+  P+ A RLS+  +S VW IL+
Sbjct: 469 EGLEISKET--KDKRLEDGYFRIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILN 526

Query: 541 EIFLKKA 547
           EI +KKA
Sbjct: 527 EIHIKKA 533


>gi|237512959 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  540 bits (1392), Expect = e-153
 Identities = 268/400 (67%), Positives = 311/400 (77%), Gaps = 7/400 (1%)

Query: 142 VSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKA 201
           VS+VMGIP+V+REV SYL +TLHSLI  L P+EK D VIVV I ETD  Y   V  N++ 
Sbjct: 7   VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 66

Query: 202 LFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGI 261
            F  EI SGL+EVISP   +YPD + L+E+FGD KERVRWRTKQNLDYCFLMMYAQ KGI
Sbjct: 67  EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 126

Query: 262 YYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILM 321
           YY+QLEDDI+ K NY +T+KNFALQ  SE+WMILEFSQLGFIGKMF++ DL+LIVEFI M
Sbjct: 127 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 186

Query: 322 FYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQK 381
           FY++KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRF+PSLFQHVG HSSL+GKIQK
Sbjct: 187 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 246

Query: 382 LKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFF 441
           L DKD+ K  L K HVNPPAEVSTSLK YQ  TLEK Y+ EDFFWA TP AGD+I F+F 
Sbjct: 247 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 306

Query: 442 QPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYL 501
           +P+ +E + F SGN EHP D L NT+VEVLPF +     E L+  +    +  R  DGY 
Sbjct: 307 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKS-----EGLEISKET--KDKRLEDGYF 359

Query: 502 QIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSE 541
           +IG F  GVAEG VDP+  P+ A RLS+  +S VW IL+E
Sbjct: 360 RIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 399


>gi|166197698 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
          Length = 478

 Score =  211 bits (537), Expect = 1e-54
 Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 32/402 (7%)

Query: 144 VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALF 203
           + +G+ SV+R+  +YL +T+ S+  + S +E ++  +VV +A+ +S +  A+ ++I   F
Sbjct: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160

Query: 204 PTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYY 263
              I +G L VI     +YP    L+ ++ DP++RV++R+KQN+DY FL+ +  +   YY
Sbjct: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220

Query: 264 VQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFY 323
           V LEDD+    N+L+ +K          W+ LEFS+LG+IGK++ S DL  +  F+LMFY
Sbjct: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280

Query: 324 RDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLK 383
           ++ P DWLL H   +     +K+            IRFKPSLFQH+G +SS  G   KLK
Sbjct: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326

Query: 384 DKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLR-EDFFWAFTPAAGDFIRFRFFQ 442
           D DF +++      NPPA + T++  ++++   KAY   +++FW   P+ GD     F  
Sbjct: 327 DDDFEEESFDIPD-NPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385

Query: 443 PLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQ 502
           P+ +++    +G  +   D L + +++V   +N    K+             R    YL+
Sbjct: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV--GENVMPSKQR------------RQCSTYLR 431

Query: 503 IGSFYKGVAE--GEVDPAFGPLEALRLSIQTDSPVWVILSEI 542
           +G F  G  E  G        +  +R+ +      W+I+  I
Sbjct: 432 LGEFKNGNFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSI 473


>gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 253 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 312
           M +A +   Y++ LED I   P + + + +         W+ILEFS L   GK+F + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 313 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 372
           S +  F L+F++D P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 373 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 430
           S        + KD+ FG      E  NP A V T + +     L+  Y L ++ +    P
Sbjct: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160

Query: 431 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 457
             G+++     +P     + + R+  + G +E
Sbjct: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192


>gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 253 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 312
           M +A +   Y++ LED I   P + + + +         W+ILEFS L   GK+F + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 313 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 372
           S +  F L+F++D P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 373 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 430
           S        + KD+ FG      E  NP A V T + +     L+  Y L ++ +    P
Sbjct: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160

Query: 431 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 457
             G+++     +P     + + R+  + G +E
Sbjct: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192


>gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 253 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 312
           M +A +   Y++ LED I   P + + + +         W+ILEFS L   GK+F + D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 313 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 372
           S +  F L+F++D P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 373 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 430
           S        + KD+ FG      E  NP A V T + +     L+  Y L ++ +    P
Sbjct: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160

Query: 431 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 457
             G+++     +P     + + R+  + G +E
Sbjct: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192


>gi|9910270 olfactomedin-like 3 [Homo sapiens]
          Length = 406

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 22 LSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKRSKEL----NLVLDEIKRAVSE 77
          LSW   L GQ+  +V+  +R   AL +RL   + +S + + EL    N +L  ++ A  E
Sbjct: 13 LSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKE 72

Query: 78 RQALR 82
          R+ALR
Sbjct: 73 REALR 77


>gi|194328806 nuclear receptor subfamily 1, group H, member 3
           isoform b [Homo sapiens]
          Length = 387

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 348 KHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKD-----KDFGKQALRKEHVNPPAE 402
           + C+R+  + R+R    L +    ++  +  I  LKD     +DF K  L+ E +NP  E
Sbjct: 222 QQCNRRSFSDRLRVTVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFE 281

Query: 403 VSTSLKTYQHFTLEKAYL-REDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPED 461
            S ++   Q    E A L     F A  P   D ++    Q   +E       +I HP D
Sbjct: 282 FSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEA-LHAYVSIHHPHD 340

Query: 462 KL 463
           +L
Sbjct: 341 RL 342


>gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform c
           [Homo sapiens]
          Length = 608

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 129 LQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETD 188
           L P  R    + GVS V  +  + REV SY  +T   L +  S +++ED  +V      D
Sbjct: 100 LGPLTRRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQD 159

Query: 189 SQYTSA-VTENIKALFPTEIHSGLLEVISPSPHFYPDFSR 227
           S+  +    + +K   P E+     + I  S  F   F R
Sbjct: 160 SELENQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDR 199


>gi|21361127 potassium inwardly-rectifying channel J15 [Homo
           sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)

Query: 165 SLISELSPQ---EKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEV----ISP 217
           S + +L+PQ   EKE  ++V+L A  +S  TSAV ++  +  P EI+ G   V    +S 
Sbjct: 262 SPLRDLTPQNLKEKEFELVVLLNATVES--TSAVCQSRTSYIPEEIYWGFEFVPVVSLSK 319

Query: 218 SPHFYPDFSRLRE 230
           +  +  DFS+  +
Sbjct: 320 NGKYVADFSQFEQ 332


>gi|25777640 potassium inwardly-rectifying channel J15 [Homo
           sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)

Query: 165 SLISELSPQ---EKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEV----ISP 217
           S + +L+PQ   EKE  ++V+L A  +S  TSAV ++  +  P EI+ G   V    +S 
Sbjct: 262 SPLRDLTPQNLKEKEFELVVLLNATVES--TSAVCQSRTSYIPEEIYWGFEFVPVVSLSK 319

Query: 218 SPHFYPDFSRLRE 230
           +  +  DFS+  +
Sbjct: 320 NGKYVADFSQFEQ 332


>gi|25777638 potassium inwardly-rectifying channel J15 [Homo
           sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)

Query: 165 SLISELSPQ---EKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEV----ISP 217
           S + +L+PQ   EKE  ++V+L A  +S  TSAV ++  +  P EI+ G   V    +S 
Sbjct: 262 SPLRDLTPQNLKEKEFELVVLLNATVES--TSAVCQSRTSYIPEEIYWGFEFVPVVSLSK 319

Query: 218 SPHFYPDFSRLRE 230
           +  +  DFS+  +
Sbjct: 320 NGKYVADFSQFEQ 332


>gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1
           isoform b [Homo sapiens]
          Length = 1054

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 230 ESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPS 289
           ES    +E V+ RT +     +LM       +Y     DD+   P  LS+   + L+ P+
Sbjct: 268 ESSPTRREAVKRRTAE-----YLMRAESISSLYGKPQLDDVSQPPGSLSSRPLWNLRSPA 322

Query: 290 EDWMILEFSQLGFIGKMFKSLDLSLIVEFIL 320
           E+  +  F  LG I K+   +D      FIL
Sbjct: 323 EE--LKAFRVLGVIDKVLLVMDTRTEQTFIL 351


>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
           isoform a [Homo sapiens]
          Length = 1066

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 230 ESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPS 289
           ES    +E V+ RT +     +LM       +Y     DD+   P  LS+   + L+ P+
Sbjct: 280 ESSPTRREAVKRRTAE-----YLMRAESISSLYGKPQLDDVSQPPGSLSSRPLWNLRSPA 334

Query: 290 EDWMILEFSQLGFIGKMFKSLDLSLIVEFIL 320
           E+  +  F  LG I K+   +D      FIL
Sbjct: 335 EE--LKAFRVLGVIDKVLLVMDTRTEQTFIL 363


>gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a
           [Homo sapiens]
          Length = 645

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 139 RTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSA-VTE 197
           + GVS V  +  + REV SY  +T   L +  S +++ED  +V      DS+  +    +
Sbjct: 147 KLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQ 206

Query: 198 NIKALFPTEIHSGLLEVISPSPHFYPDFSR 227
            +K   P E+     + I  S  F   F R
Sbjct: 207 EVKEAPPRELTEEEKQQILHSEEFLIFFDR 236


>gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform b
           [Homo sapiens]
          Length = 628

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 139 RTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSA-VTE 197
           + GVS V  +  + REV SY  +T   L +  S +++ED  +V      DS+  +    +
Sbjct: 130 KLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQ 189

Query: 198 NIKALFPTEIHSGLLEVISPSPHFYPDFSR 227
            +K   P E+     + I  S  F   F R
Sbjct: 190 EVKEAPPRELTEEEKQQILHSEEFLIFFDR 219


>gi|148539600 ubiquitin specific protease 53 [Homo sapiens]
          Length = 1073

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 22/135 (16%)

Query: 283 FALQQPSEDWMILEFSQLGFIGKMFKSLDLSLI---VEFILMFYRDKPIDWLLDHILWVK 339
           FA    S  W+  + + +  IG  +K +    I    + +L+FY                
Sbjct: 305 FAFHTKSSKWVFFDDANVKEIGTRWKDVVSKCIRCHFQPLLLFY---------------- 348

Query: 340 VCNPEKDAKHC-DRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVN 398
             NP+  A    D  +  +      S+ +++G    +  K   LK+  FG QA ++E+  
Sbjct: 349 -ANPDGTAVSTEDALRQVISWSHYKSVAENMGCEKPVIHKSDNLKENGFGDQAKQRENQK 407

Query: 399 PPAE-VSTSLKTYQH 412
            P + +S+S +++ H
Sbjct: 408 FPTDNISSSNRSHSH 422


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,924,632
Number of Sequences: 37866
Number of extensions: 957526
Number of successful extensions: 2616
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2595
Number of HSP's gapped (non-prelim): 19
length of query: 548
length of database: 18,247,518
effective HSP length: 107
effective length of query: 441
effective length of database: 14,195,856
effective search space: 6260372496
effective search space used: 6260372496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.