BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7705987 glycolipid transfer protein [Homo sapiens] (209 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7705987 glycolipid transfer protein [Homo sapiens] 424 e-119 gi|7705684 pleckstrin homology domain containing, family A (phos... 104 6e-23 gi|14249174 pleckstrin homology domain containing, family A (pho... 79 4e-15 gi|71274150 glycolipid transfer protein domain containing 1 [Hom... 42 4e-04 gi|62526120 glycolipid transfer protein domain containing 2 [Hom... 37 0.009 gi|34577059 adipose differentiation-related protein [Homo sapiens] 29 2.5 gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3 c... 29 2.5 gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3 c... 29 2.5 gi|154689780 son of sevenless homolog 2 [Homo sapiens] 28 5.6 gi|15147337 ubiquitin protein ligase E3 component n-recognin 5 [... 28 5.6 gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 28 5.6 gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 28 7.3 gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 28 7.3 gi|4557841 recombination activating gene 1 [Homo sapiens] 27 9.5 gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 27 9.5 gi|6382062 arg tyrosine kinase isoform b [Homo sapiens] 27 9.5 gi|209862778 arg tyrosine kinase isoform e [Homo sapiens] 27 9.5 gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] 27 9.5 gi|153266757 arg tyrosine kinase isoform a [Homo sapiens] 27 9.5 >gi|7705987 glycolipid transfer protein [Homo sapiens] Length = 209 Score = 424 bits (1090), Expect = e-119 Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVY 60 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVY Sbjct: 1 MALLAEHLLKPLPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVY 60 Query: 61 DTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENH 120 DTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENH Sbjct: 61 DTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENH 120 Query: 121 PNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKI 180 PNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKI Sbjct: 121 PNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKI 180 Query: 181 RLFLVNYTATIDVIYEMYTQMNAELNYKV 209 RLFLVNYTATIDVIYEMYTQMNAELNYKV Sbjct: 181 RLFLVNYTATIDVIYEMYTQMNAELNYKV 209 >gi|7705684 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 9 [Homo sapiens] Length = 391 Score = 104 bits (259), Expect = 6e-23 Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 7/152 (4%) Query: 15 DKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNIL 74 D I T FL + + P D LG VF P+K D+ NI K+ Y TN +F TLQ I+ Sbjct: 211 DSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKYITNKEEFTTLQKIV 270 Query: 75 EVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEM 134 E E A+ + AT AL+WLKRGL+F++ FL + +GE+D I+ AY Sbjct: 271 LHEVEADVAQ-VRNSATEALLWLKRGLKFLKGFLTEVKNGEKD------IQTALNNAYGK 323 Query: 135 ALKKYHGWIVQKIFQAALYAAPYKSDFLKALS 166 L+++HGW+V+ +F AL A P DF+ AL+ Sbjct: 324 TLRQHHGWVVRGVFALALRATPSYEDFVAALT 355 >gi|14249174 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Homo sapiens] Length = 440 Score = 78.6 bits (192), Expect = 4e-15 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 15 DKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNIL 74 D I T FL + + P D LG VF P+K D+ GNI K+ Y TN +F TLQ I+ Sbjct: 327 DSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIV 386 Query: 75 EVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERD 117 E E A+ + AT AL+WLKRGL+F++ FL + +GE+D Sbjct: 387 LHEVEADVAQ-VRNSATEALLWLKRGLKFLKGFLTEVKNGEKD 428 >gi|71274150 glycolipid transfer protein domain containing 1 [Homo sapiens] Length = 214 Score = 42.0 bits (97), Expect = 4e-04 Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 12 LPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAK-FRTL 70 L +++ P++ + L F + LG+ +F+ I D+ + ++ + ++ +R+L Sbjct: 21 LDEKEEVLLDPYIASWKGLVRFLNSLGT-IFSFISKDVVSKLRIMERLRGGPQSEHYRSL 79 Query: 71 QNIL--EVEKEMYGAE----WPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLI 124 Q ++ E+ + E P+ G L L R L ++Q+FL+ + D L Sbjct: 80 QAMVAHELSNRLVDLERRSHHPESGCRTVLR-LHRALHWLQLFLEGLRTSPEDARTSAL- 137 Query: 125 RVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKG 168 +Y +L YH W+V++ A P + FL+A++ G Sbjct: 138 ---CADSYNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNVG 178 >gi|62526120 glycolipid transfer protein domain containing 2 [Homo sapiens] Length = 291 Score = 37.4 bits (85), Expect = 0.009 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 19/202 (9%) Query: 12 LPADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKA-VYDTNPAKFRTL 70 L + + P+L L F LGS VF + +T ++A V+ + + +L Sbjct: 93 LKPEGDVGLSPYLAGWRALVEFLTPLGS-VFAFATREAFTKVTDLEARVHGPDAEHYWSL 151 Query: 71 QNILEVEKEMYGAEWP--------KVGATLALMWLKRGLRFIQVFLQSICDGERDENHPN 122 + E+ E P + + L+ L R LR+ Q+ L + G Sbjct: 152 AAMAAWERRAGLLEQPGAAPRDPTRSSGSRTLLLLHRALRWSQLCLHRVATGALGGPEAG 211 Query: 123 LIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKIRL 182 V + AY AL +H W+V++ + A A P + L+ G TE E R Sbjct: 212 ---VQCSDAYRAALGPHHPWLVRQTARLAFLAFPGRRRLLELACPG--ATEAEA----RA 262 Query: 183 FLVNYTATIDVIYEMYTQMNAE 204 L+ T++ +Y + AE Sbjct: 263 ALLRAAGTLEDVYNRTQSLLAE 284 >gi|34577059 adipose differentiation-related protein [Homo sapiens] Length = 437 Score = 29.3 bits (64), Expect = 2.5 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 138 KYHGWIVQKIFQAALYAAPYK--SDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDVIY 195 K+ G + I+ AA +K SD L SKGQ +E L+ + +LVN T ++ Sbjct: 344 KHMGVMAGDIYSVFRNAASFKEVSDSLLTSSKGQLQKMKESLDDVMDYLVNNTPLNWLVG 403 Query: 196 EMYTQMNAELN 206 Y Q+ N Sbjct: 404 PFYPQLTESQN 414 >gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3 component n-recognin 5 isoform 2 [Homo sapiens] Length = 2277 Score = 29.3 bits (64), Expect = 2.5 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 30 LPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVG 89 LPP LG V + I + I K AV K +Q+IL + E + Sbjct: 334 LPPI-SSLGMGVHSLINLPANSTIKKKAAVIIMAVEKQTLMQHILRCDYEACR----QYL 388 Query: 90 ATLALMWLKRGLRFIQVFLQSICDGERDENH 120 L +L++ L+ +Q F+ CDG R+ H Sbjct: 389 MNLEQRFLEQNLQMLQTFISHRCDGNRNILH 419 >gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3 component n-recognin 5 isoform 1 [Homo sapiens] Length = 2796 Score = 29.3 bits (64), Expect = 2.5 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 30 LPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVG 89 LPP LG V + I + I K AV K +Q+IL + E + Sbjct: 837 LPPI-SSLGMGVHSLINLPANSTIKKKAAVIIMAVEKQTLMQHILRCDYEACR----QYL 891 Query: 90 ATLALMWLKRGLRFIQVFLQSICDGERDENH 120 L +L++ L+ +Q F+ CDG R+ H Sbjct: 892 MNLEQRFLEQNLQMLQTFISHRCDGNRNILH 922 >gi|154689780 son of sevenless homolog 2 [Homo sapiens] Length = 1332 Score = 28.1 bits (61), Expect = 5.6 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 20/96 (20%) Query: 104 IQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLK 163 + + QSI DG ++ L R+ M + YH W ++ + LK Sbjct: 318 VALHFQSIADGFKEAVRYVLPRL-------MLVPVYHCWHYFELLKQ-----------LK 359 Query: 164 ALSKGQNVTEEECLEKIRLFLVNYTATIDVIYEMYT 199 A S+ Q + ECL + L+N ++D IY+ Y+ Sbjct: 360 ACSEEQE--DRECLNQAITALMNLQGSMDRIYKQYS 393 >gi|15147337 ubiquitin protein ligase E3 component n-recognin 5 [Homo sapiens] Length = 2799 Score = 28.1 bits (61), Expect = 5.6 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%) Query: 30 LPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVG 89 LPP LG V + I + I K AV K +Q+IL + E + Sbjct: 838 LPPI-SSLGMGVHSLINLPANSTIKKKAAVIIMAVEKQTLMQHILRCDYEACRQYLMNLE 896 Query: 90 ATLALMWLKRGLRFIQVFLQSICDGERDENH 120 + L ++ L+ +Q F+ CDG R+ H Sbjct: 897 QAVVL---EQNLQMLQTFISHRCDGNRNILH 924 >gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] Length = 515 Score = 28.1 bits (61), Expect = 5.6 Identities = 44/196 (22%), Positives = 74/196 (37%), Gaps = 28/196 (14%) Query: 21 GPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITK-IKAVYDTNPAKFRTLQNILEVEKE 79 G +L HL P F C G P I +S K I ++ + A NILE+ Sbjct: 174 GQYLLYGFHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEI--- 230 Query: 80 MYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEM---AL 136 L +KRGL + + E +E H N + N K +L Sbjct: 231 ----------FHLGFKKIKRGL-----WGKYKLKKEHNEFHANKAKQNVAKYQSTSANSL 275 Query: 137 KKY-----HGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEEC-LEKIRLFLVNYTAT 190 K+ + +V+K A+Y + S + +V +E+C L++ L N +T Sbjct: 276 KRLPSAPDYNLLVEKQTHTAVYPSLNSSSVFQPNPDNHSVNDEKCILDEQETVLSNEIST 335 Query: 191 IDVIYEMYTQMNAELN 206 + + +++ N Sbjct: 336 LSTSCSHFQHISSNNN 351 >gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a [Homo sapiens] Length = 1130 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 255 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 301 >gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b [Homo sapiens] Length = 1149 Score = 27.7 bits (60), Expect = 7.3 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 274 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 320 >gi|4557841 recombination activating gene 1 [Homo sapiens] Length = 1043 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/37 (29%), Positives = 22/37 (59%) Query: 106 VFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGW 142 V++ ++CD R E NL+ + T+++ L++Y W Sbjct: 727 VYICTLCDATRLEASQNLVFHSITRSHAENLERYEVW 763 >gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] Length = 1167 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 286 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 332 >gi|6382062 arg tyrosine kinase isoform b [Homo sapiens] Length = 1182 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 301 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 347 >gi|209862778 arg tyrosine kinase isoform e [Homo sapiens] Length = 542 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 280 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 326 >gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] Length = 1064 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 286 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 332 >gi|153266757 arg tyrosine kinase isoform a [Homo sapiens] Length = 1146 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 79 EMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRV 126 E+Y W K T+A+ LK ++ FL+ ++ HPNL+++ Sbjct: 265 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA-VMKEIKHPNLVQL 311 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,528,985 Number of Sequences: 37866 Number of extensions: 304033 Number of successful extensions: 576 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 567 Number of HSP's gapped (non-prelim): 19 length of query: 209 length of database: 18,247,518 effective HSP length: 98 effective length of query: 111 effective length of database: 14,536,650 effective search space: 1613568150 effective search space used: 1613568150 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.