BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 [Homo sapiens] (355 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-... 696 0.0 gi|223029426 solute carrier family 35, member D2 [Homo sapiens] 375 e-104 gi|56912198 solute carrier family 35, member D3 [Homo sapiens] 89 8e-18 gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 65 1e-10 gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 65 1e-10 gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 65 1e-10 gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 58 1e-08 gi|164607128 solute carrier family 35, member E1 [Homo sapiens] 49 5e-06 gi|27881499 solute carrier family 35, member C2 isoform a [Homo ... 42 8e-04 gi|21314776 solute carrier family 35, member C2 isoform a [Homo ... 42 8e-04 gi|47827222 solute carrier family 35, member E4 [Homo sapiens] 34 0.23 gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 33 0.30 gi|8923657 solute carrier family 35, member A5 [Homo sapiens] 33 0.51 gi|4506527 rhodopsin [Homo sapiens] 29 5.6 gi|53828736 olfactory receptor, family 4, subfamily K, member 15... 29 7.3 gi|6912668 solute carrier family 35 member 3A [Homo sapiens] 29 7.3 gi|52317263 olfactory receptor, family 4, subfamily N, member 2 ... 28 9.6 >gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 [Homo sapiens] Length = 355 Score = 696 bits (1796), Expect = 0.0 Identities = 355/355 (100%), Positives = 355/355 (100%) Query: 1 MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN 60 MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN Sbjct: 1 MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN 60 Query: 61 KSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ 120 KSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ Sbjct: 61 KSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQ 120 Query: 121 ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSD 180 ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSD Sbjct: 121 ITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSD 180 Query: 181 LAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGD 240 LAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGD Sbjct: 181 LAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTGD 240 Query: 241 AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG 300 AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG Sbjct: 241 AQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG 300 Query: 301 MVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGKGAV 355 MVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGKGAV Sbjct: 301 MVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKLDIKGKGAV 355 >gi|223029426 solute carrier family 35, member D2 [Homo sapiens] Length = 337 Score = 375 bits (962), Expect = e-104 Identities = 179/310 (57%), Positives = 238/310 (76%), Gaps = 1/310 (0%) Query: 42 KLLAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDL 101 +LL+A FYG SFLIV+VNK++LT Y FPS + +G+GQM AT+ +L+V K +++ FPD Sbjct: 27 RLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDF 86 Query: 102 DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWG 161 D+ +P K FPLPLLY GN I+GL ST KL+LPMFTVLR+F+I T+ E ++L K +S Sbjct: 87 DKKIPVKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLN 146 Query: 162 IKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLY 221 I ++VFA+I+GAF+AA SDLAF+LEGY F+ +ND+ TAANG Y KQK+D KELGKYG+L+ Sbjct: 147 IILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLF 206 Query: 222 YNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNS 281 YNA FMI+PTL I+ TGD Q+A EF W + +F+LQF LSC +GF+LMY+TVLC+ YNS Sbjct: 207 YNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNS 266 Query: 282 ALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQ- 340 ALTT +VG IKN+ + YIG++ GGDYIF+ NF+GLNI +AG L YS++T + + K Sbjct: 267 ALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPV 326 Query: 341 SEANNKLDIK 350 E N LD+K Sbjct: 327 GEENICLDLK 336 >gi|56912198 solute carrier family 35, member D3 [Homo sapiens] Length = 416 Score = 88.6 bits (218), Expect = 8e-18 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 5/295 (1%) Query: 49 YGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRK 108 +GV S + ++ K +++ Y+F V L + + L ++ P ++ R Sbjct: 18 HGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARS 77 Query: 109 TFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTF-SWGIKMTVF 167 + +L L+S + L+LPM+ V +R L TM ++LK S G+ V Sbjct: 78 FAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVL 137 Query: 168 AMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFM 227 GA +A + DL D GY ++ ++ AA +++ E G Y A+ Sbjct: 138 ITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAV-S 196 Query: 228 ILPTLAIAYFTG-DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTT 286 P L I F D+ A F GW D + F ++G + + T+ CT NSA+TT+ Sbjct: 197 ATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTS 256 Query: 287 IVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQS 341 VG +K+I +GMV D T G+ ++ GS++Y F E + KQS Sbjct: 257 FVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETR--KQS 309 >gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] Length = 364 Score = 64.7 bits (156), Expect = 1e-10 Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 29/297 (9%) Query: 44 LAAGFYGVSSFLIVVVNKSVLTN--YRFPSSLCVGLGQMVATVAVLWVGKALRV-----V 96 L Y V+S +V +NK +L + R + + V Q + T + AL V Sbjct: 43 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAV 102 Query: 97 KFPDL--DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLL 154 FP L D V R PL +++ G K + + + V R + +F + +LL Sbjct: 103 DFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLL 162 Query: 155 KKTFSWGIKMTVFAMIIGAFVAASSDLA---FDLEGYAFILINDVLTAANGAYVKQKLDS 211 K+T S+ +T +I G ++ + A G F ++ + + N Y + L + Sbjct: 163 KQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPA 222 Query: 212 KELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMY 271 + + L +YN + + L + G+ Q +F F TL + GF + Y Sbjct: 223 VDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGY 282 Query: 272 ATVLCTQYNSALTTTIVGCIKNILITYIG-----------------MVFGGDYIFTW 311 T L ++ S LT + G K T + MV GG +TW Sbjct: 283 VTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTW 339 >gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] Length = 351 Score = 64.7 bits (156), Expect = 1e-10 Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 29/297 (9%) Query: 44 LAAGFYGVSSFLIVVVNKSVLTN--YRFPSSLCVGLGQMVATVAVLWVGKALRV-----V 96 L Y V+S +V +NK +L + R + + V Q + T + AL V Sbjct: 30 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAV 89 Query: 97 KFPDL--DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLL 154 FP L D V R PL +++ G K + + + V R + +F + +LL Sbjct: 90 DFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLL 149 Query: 155 KKTFSWGIKMTVFAMIIGAFVAASSDLA---FDLEGYAFILINDVLTAANGAYVKQKLDS 211 K+T S+ +T +I G ++ + A G F ++ + + N Y + L + Sbjct: 150 KQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPA 209 Query: 212 KELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMY 271 + + L +YN + + L + G+ Q +F F TL + GF + Y Sbjct: 210 VDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGY 269 Query: 272 ATVLCTQYNSALTTTIVGCIKNILITYIG-----------------MVFGGDYIFTW 311 T L ++ S LT + G K T + MV GG +TW Sbjct: 270 VTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTW 326 >gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] Length = 351 Score = 64.7 bits (156), Expect = 1e-10 Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 29/297 (9%) Query: 44 LAAGFYGVSSFLIVVVNKSVLTN--YRFPSSLCVGLGQMVATVAVLWVGKALRV-----V 96 L Y V+S +V +NK +L + R + + V Q + T + AL V Sbjct: 30 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAV 89 Query: 97 KFPDL--DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLL 154 FP L D V R PL +++ G K + + + V R + +F + +LL Sbjct: 90 DFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLL 149 Query: 155 KKTFSWGIKMTVFAMIIGAFVAASSDLA---FDLEGYAFILINDVLTAANGAYVKQKLDS 211 K+T S+ +T +I G ++ + A G F ++ + + N Y + L + Sbjct: 150 KQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPA 209 Query: 212 KELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMY 271 + + L +YN + + L + G+ Q +F F TL + GF + Y Sbjct: 210 VDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGY 269 Query: 272 ATVLCTQYNSALTTTIVGCIKNILITYIG-----------------MVFGGDYIFTW 311 T L ++ S LT + G K T + MV GG +TW Sbjct: 270 VTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTW 326 >gi|56699411 solute carrier family 35, member E2 [Homo sapiens] Length = 313 Score = 57.8 bits (138), Expect = 1e-08 Identities = 65/303 (21%), Positives = 133/303 (43%), Gaps = 9/303 (2%) Query: 44 LAAG--FYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDL 101 +AAG F + S IV +NK + + FP+ + + L V T L++ + L + L Sbjct: 14 IAAGLLFNLLVSICIVFLNKWIYVYHGFPN-MSLTLVHFVVTWLGLYICQKLDIFAPKSL 72 Query: 102 DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWG 161 P + L L + G + S + + + + + + + + +KTFS Sbjct: 73 P---PSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTR 129 Query: 162 IKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLY 221 I++T+ + +G + + D+ F+ G F + ++T+ +V K ++ LLY Sbjct: 130 IQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLY 189 Query: 222 YNA-LFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYN 280 Y A + + +A+ +F + F W+ + LL LS V+ F++ + Sbjct: 190 YQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSA-LLMVLLSGVIAFMVNLSIYWIIGNT 248 Query: 281 SALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITFTEEQLSKQ 340 S +T + G K + + G V D + + +G+ ++ G L Y++ +E++ S+ Sbjct: 249 SPVTYNMFGHFKFCITLFGGYVLFKDPL-SINQALGILCTLFGILAYTHFKLSEQEGSRS 307 Query: 341 SEA 343 A Sbjct: 308 KLA 310 >gi|164607128 solute carrier family 35, member E1 [Homo sapiens] Length = 410 Score = 49.3 bits (116), Expect = 5e-06 Identities = 62/313 (19%), Positives = 134/313 (42%), Gaps = 43/313 (13%) Query: 58 VVNKSVLTNYRFPSS--------LCVGLGQMVATVAVLWVGKALRVVKFPDLD------- 102 VVNK +L+ + FP + LC GL ++ +A RV P + Sbjct: 46 VVNKVILSAFPFPVTVSLCHILALCAGLPPLL---------RAWRVPPAPPVSGPGPSPH 96 Query: 103 ---------RNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVL 153 R PR PL + ++ S K+ + ++ ++ + ++ Sbjct: 97 PSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRII 156 Query: 154 LKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKL-DSK 212 +K+ S + +++ +I G +A ++L+FD+ G L + + + K+ L DS+ Sbjct: 157 MKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSR 216 Query: 213 --ELGKYGLLYYNALFMILPT---LAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGF 267 L +L +A+F ++PT + ++ F + ++ W TL LL + C Sbjct: 217 IHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQ-WPWTLLLLAVSGFCNFAQ 275 Query: 268 ILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVY 327 ++ ++L S L+ ++ K I++ + ++ + + T TN +G+ +I G +Y Sbjct: 276 NVIAFSIL--NLVSPLSYSVANATKRIMVITVSLIMLRNPV-TSTNVLGMMTAILGVFLY 332 Query: 328 SYITFTEEQLSKQ 340 + + Q +++ Sbjct: 333 NKTKYDANQQARK 345 >gi|27881499 solute carrier family 35, member C2 isoform a [Homo sapiens] Length = 365 Score = 42.0 bits (97), Expect = 8e-04 Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 20/208 (9%) Query: 130 LNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYA 189 + + ++T+ + ++LF + + + + + V + G F+ F++EG+A Sbjct: 108 VTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFA 167 Query: 190 FILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYF----------TG 239 +L + + L ELG + + +F + P + + F Sbjct: 168 LVLGASFIGGIRWTLTQMLLQKAELGLQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLS 225 Query: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILM----YATVLCTQYNSALTTTIVGCIKNIL 295 ++K F+ DT LL+ S +G IL ++ L S+LT +I G K + Sbjct: 226 TSEKIFRFQ---DTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVC 282 Query: 296 ITYIGMVFGGDYIFTWTNFIGLNISIAG 323 + GD I + N++G + ++G Sbjct: 283 TLLLAAHLLGDQI-SLLNWLGFALCLSG 309 >gi|21314776 solute carrier family 35, member C2 isoform a [Homo sapiens] Length = 365 Score = 42.0 bits (97), Expect = 8e-04 Identities = 41/208 (19%), Positives = 85/208 (40%), Gaps = 20/208 (9%) Query: 130 LNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYA 189 + + ++T+ + ++LF + + + + + V + G F+ F++EG+A Sbjct: 108 VTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFA 167 Query: 190 FILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYF----------TG 239 +L + + L ELG + + +F + P + + F Sbjct: 168 LVLGASFIGGIRWTLTQMLLQKAELGLQNPI--DTMFHLQPLMFLGLFPLFAVFEGLHLS 225 Query: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILM----YATVLCTQYNSALTTTIVGCIKNIL 295 ++K F+ DT LL+ S +G IL ++ L S+LT +I G K + Sbjct: 226 TSEKIFRFQ---DTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVC 282 Query: 296 ITYIGMVFGGDYIFTWTNFIGLNISIAG 323 + GD I + N++G + ++G Sbjct: 283 TLLLAAHLLGDQI-SLLNWLGFALCLSG 309 >gi|47827222 solute carrier family 35, member E4 [Homo sapiens] Length = 350 Score = 33.9 bits (76), Expect = 0.23 Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 18/226 (7%) Query: 115 LYFGNQIT-GLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGA 173 L FG + G + + L + ++ + LFT+ +LL + + + +GA Sbjct: 115 LTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGA 174 Query: 174 FVAASSDLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNAL--FMILPT 231 + + + G F+L L L + L LLY +L F +L Sbjct: 175 ACSLAGEFRTPPTGCGFLLAATCLRGLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAG 234 Query: 232 LAIAYFTGDAQKAVEFEG--WADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVG 289 A+ G A + WA L LSC++ + A+ SALT ++G Sbjct: 235 AALVLEAGVAPPPTAGDSRLWACIL------LSCLLSVLYNLASFSLLALTSALTVHVLG 288 Query: 290 ---CIKNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSYITF 332 + N++++ ++FG + +++G+ ++++G +Y F Sbjct: 289 NLTVVGNLILS--RLLFGSR--LSALSYVGIALTLSGMFLYHNCEF 330 >gi|14249528 solute carrier family 35, member B4 [Homo sapiens] Length = 331 Score = 33.5 bits (75), Expect = 0.30 Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 58/291 (19%) Query: 102 DRNVPRKTFPLPLLYFGNQITGLFSTKKLN---------LPMFTVLRRFSILFTMFAEGV 152 + ++ RK +P+ Y+ +T F+ +N +P+ + R S++ M + Sbjct: 51 EADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGII 110 Query: 153 LLKKTFSWGIKMTVFAMI-IGAF---------VAASSDLAFD---------LEGYAFILI 193 +LKK +S K T A++ +G F V + S L+ + L G + Sbjct: 111 ILKKRYSI-FKYTSIALVSVGIFICTFMSAKQVTSQSSLSENDGFQAFVWWLLGIGALTF 169 Query: 194 NDVLTAANGAYVKQKLDSKELGKYG--LLYYNALFMILPTLAIAYFTGD---------AQ 242 +++A G + Q+ K GK+ L+YN LP + D Sbjct: 170 ALLMSARMGIF--QETLYKRFGKHSKEALFYN---HALPLPGFVFLASDIYDHAVLFNKS 224 Query: 243 KAVEFEGWADTLFLLQFTL--SCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIG 300 + E TL ++ F L + + ++ + + T ++LT T+V ++ ++ Sbjct: 225 ELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFILTTECASLTVTLVVTLRK----FVS 280 Query: 301 MVFGGDYI---FTWTNFIGLNISIAGSLVYSYI----TFTEEQLSKQSEAN 344 ++F Y FT +++G G+L+Y+ + T+ + K S+ N Sbjct: 281 LIFSILYFQNPFTLWHWLGTLFVFIGTLMYTEVWNNLGTTKSEPQKDSKKN 331 >gi|8923657 solute carrier family 35, member A5 [Homo sapiens] Length = 424 Score = 32.7 bits (73), Expect = 0.51 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 24/171 (14%) Query: 38 TVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPS-----SLCVGLGQMVATVAVLWVGKA 92 T++ LL A F +SS I++V S ++ ++C L ++V V V + Sbjct: 16 TMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVLVSFC--- 72 Query: 93 LRVVKFPDLDRNVPRKTFP---------LP-LLYFGNQITGLFSTKKLNLPMFTVLRRFS 142 V+K RN+ ++ +P LYF + + + L M + FS Sbjct: 73 --VIKKDHQSRNLKYASWKEFSDFMKWSIPAFLYFLDNLIVFYVLSYLQPAMAVIFSNFS 130 Query: 143 ILFTMFAEGVLLKKTFS---WGIKMTVFAMIIGAFVAASSDLAFDLEGYAF 190 I+ T ++LK+ + W +T+F I+ A A + L +L G F Sbjct: 131 IITTALLFRIVLKRRLNWIQWASLLTLFLSIV-ALTAGTKTLQHNLAGRGF 180 >gi|4506527 rhodopsin [Homo sapiens] Length = 348 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 248 EGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYIGMVFGGDY 307 E W ++ L V+GF + + T+ T + L T + + N+ + + MV GG Sbjct: 33 EPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGG-- 90 Query: 308 IFTWTNFIGLN 318 FT T + L+ Sbjct: 91 -FTSTLYTSLH 100 >gi|53828736 olfactory receptor, family 4, subfamily K, member 15 [Homo sapiens] Length = 348 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%) Query: 31 MASAETLTVFLKLLA-AGFYGVSSFLIVVVNKSVL---TNYRFPSSLCVGLGQMVA--TV 84 +A +T V L ++A +GF +SSFL++VV+ +V+ R +S+ + A TV Sbjct: 211 LACIDTYVVSLLIVADSGFLSLSSFLLLVVSYTVILVTVRNRSSASMAKARSTLTAHITV 270 Query: 85 AVLWVGKALRVVKFP 99 L+ G + + +P Sbjct: 271 VTLFFGPCIFIYVWP 285 >gi|6912668 solute carrier family 35 member 3A [Homo sapiens] Length = 325 Score = 28.9 bits (63), Expect = 7.3 Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 29/218 (13%) Query: 130 LNLPMFTVLRRFSILFT-MFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLE-- 186 L+ + V + IL T +F+ +L KK + V M AFV SD D + Sbjct: 108 LDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQLDSKEL 167 Query: 187 --GYAFILINDVLTAA-----NGAY----VKQKLDSKELGKYGLLYYNALFMILPTLAIA 235 G F+ + VLTA G Y +K+ S + L ++ ++F ++ + Sbjct: 168 SAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLM---GVY 224 Query: 236 YFTGD-AQKAVEFEGWADTLFL---LQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCI 291 + G+ K F+G+ ++ LQ V+ ++ YA + + ++L+ Sbjct: 225 IYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSI------ 278 Query: 292 KNILITYIGMVFGGDYIFTWTNFIGLNISIAGSLVYSY 329 IL T I + D++ T F+G + I + +Y Y Sbjct: 279 --ILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGY 314 >gi|52317263 olfactory receptor, family 4, subfamily N, member 2 [Homo sapiens] Length = 307 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%) Query: 260 TLSCVMGFILMYATVLCT---QYNSALTTTIVGCIKNILITYIGMVFG-GDYIFT 310 TL C +G + YA +LC + A + CI +I++ + +FG G +I+T Sbjct: 207 TLLCFLGLLASYAVILCRIRGSSSEAKNKAMSTCITHIIVIF--FMFGPGIFIYT 259 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.139 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,801,288 Number of Sequences: 37866 Number of extensions: 401098 Number of successful extensions: 1137 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1127 Number of HSP's gapped (non-prelim): 18 length of query: 355 length of database: 18,247,518 effective HSP length: 103 effective length of query: 252 effective length of database: 14,347,320 effective search space: 3615524640 effective search space used: 3615524640 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.