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Search of human proteins with 7662056
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662056 protocadherin gamma subfamily A, 8 isoform 2
precursor [Homo sapiens]
(820 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1612 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1591 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1230 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1230 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1150 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1150 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1148 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1145 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1138 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1137 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1136 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1132 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1132 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1130 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1126 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1126 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1107 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1107 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1103 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1103 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1094 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1094 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1091 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1089 0.0
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur... 852 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 659 0.0
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 659 0.0
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs... 655 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 655 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 653 0.0
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1612 bits (4173), Expect = 0.0
Identities = 820/820 (100%), Positives = 820/820 (100%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR 820
SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCLLLISR 820
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1591 bits (4119), Expect = 0.0
Identities = 808/808 (100%), Positives = 808/808 (100%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808
SQEGCEKNDSLLTSVDFHEYKNEADHGQ
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1230 bits (3182), Expect = 0.0
Identities = 627/796 (78%), Positives = 682/796 (85%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAP RG L+LLC+LLG LWE QIRYSVPEET+KG VGNISKDL L+PR+LA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N LVED+ KL+G+E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
+VQTGDNGAINPELVLERALDREE AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
GTVI + HD+DSGKNGQVVC ++NL F LE S +YYRL+T + LDRE S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTE I L V DINDNPP F ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVA+ADSIP++L +LGSL+ D S LTLYLVVAVA +SCVFL FV LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
S LL+ + L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVD 796
SQ+ CEKN+ L SVD
Sbjct: 781 SQQSCEKNEPLCVSVD 796
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1230 bits (3182), Expect = 0.0
Identities = 627/796 (78%), Positives = 682/796 (85%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAP RG L+LLC+LLG LWE QIRYSVPEET+KG VGNISKDL L+PR+LA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ VRIVSRGRTQLF+LNPRSG+L+TAGRIDREELCAQSPRCL+N LVED+ KL+G+E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
IE+ DIND+ PKFQ E LEVKINEIAVPGARYPLPEA+DPDVGVNSLQSYQLSPNHHFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
+VQTGDNGAINPELVLERALDREE AHHLVLTASDGG+P RSSTVRIHVTVLDTNDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF IYRVKVLEN+PPGT LLT TASD DEGINGKVAYKF KINEKQ+ LFQLNENTGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS AKSLDYEECSFYEMEIQAED G L G TK+LISVEDVNDNRPEV ITSLFSPV E++
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
GTVI + HD+DSGKNGQVVC ++NL F LE S +YYRL+T + LDRE S YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTE I L V DINDNPP F ASYS Y+ ENN RG SIFS+ A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S EN++V YS+ EDT+QG+PLS+Y+SINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVA+ADSIP++L +LGSL+ D S LTLYLVVAVA +SCVFL FV LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
S LL+ + L GVP SHFVGV+ V+AFLQTYSQE SLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVD 796
SQ+ CEKN+ L SVD
Sbjct: 781 SQQSCEKNEPLCVSVD 796
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1150 bits (2975), Expect = 0.0
Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)
Query: 1 MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
MAA ++R + + L+LLC G WE G QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
Query: 57 RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
Query: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
FG+EIE+ DINDN PKFQ E+L+VKINE G R+PLPEA+DPDVGVNSLQSYQLSPN
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
Query: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
HFSL VQ+ NG PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
Query: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
DNAPVF P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q FQLN+
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
Query: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
TGEI I+++LDYEE FYE+EIQAED GA L K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
Query: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
E+S GTV+A L+VHD DS +NGQV C LPFKLEKSI +YYRLV + LDRE VS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
Query: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
YNITV A+D G+PPLSTE L VADINDNPPTF SY YI ENN RGASIFS+TA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
Query: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ +LQ+ VTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
Query: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
Query: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
Query: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
TVTLTVAVADSIP+VL +LGS + + S LTLYLVVAVAA+SCVFLAFV VLL RL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
Query: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
RRWHKSRLLQ SGG L GV SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
Query: 777 DMLISQEGCEKNDSL 791
D LISQE CEKND L
Sbjct: 781 DTLISQESCEKNDPL 795
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1150 bits (2975), Expect = 0.0
Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)
Query: 1 MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
MAA ++R + + L+LLC G WE G QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
Query: 57 RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
Query: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
FG+EIE+ DINDN PKFQ E+L+VKINE G R+PLPEA+DPDVGVNSLQSYQLSPN
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
Query: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
HFSL VQ+ NG PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
Query: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
DNAPVF P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q FQLN+
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
Query: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
TGEI I+++LDYEE FYE+EIQAED GA L K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
Query: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
E+S GTV+A L+VHD DS +NGQV C LPFKLEKSI +YYRLV + LDRE VS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
Query: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
YNITV A+D G+PPLSTE L VADINDNPPTF SY YI ENN RGASIFS+TA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
Query: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ +LQ+ VTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
Query: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
Query: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
Query: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
TVTLTVAVADSIP+VL +LGS + + S LTLYLVVAVAA+SCVFLAFV VLL RL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
Query: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
RRWHKSRLLQ SGG L GV SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
Query: 777 DMLISQEGCEKNDSL 791
D LISQE CEKND L
Sbjct: 781 DTLISQESCEKNDPL 795
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1148 bits (2969), Expect = 0.0
Identities = 594/813 (73%), Positives = 666/813 (81%), Gaps = 3/813 (0%)
Query: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
Query: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
Query: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
Query: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Query: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
Query: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
Query: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
Query: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
Query: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
Query: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
Query: 783 EGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCL 815
E CEKNDSLLTSVDF E K QVS L L
Sbjct: 783 ESCEKNDSLLTSVDFQECKENLPSIQVSPALPL 815
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1145 bits (2961), Expect = 0.0
Identities = 589/799 (73%), Positives = 661/799 (82%), Gaps = 3/799 (0%)
Query: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
Query: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
Query: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
Query: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Query: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
Query: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
Query: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
Query: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
Query: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
Query: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
Query: 783 EGCEKNDSLLTSVDFHEYK 801
E CEKNDSLLTSVDF E K
Sbjct: 783 ESCEKNDSLLTSVDFQECK 801
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1138 bits (2944), Expect = 0.0
Identities = 583/810 (71%), Positives = 666/810 (82%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MA PQ P+R E +LL LLGTLW QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK L+ VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EI+DINDN P+F E+LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQ+ +G PELVLE LDRE EA + LVLTA DGG P RSS +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
+F P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS + +LDYE+ SFYE+ ++A D L R K+LI++ DVNDN PEV++TS + E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
PGTVIA V D+DSG NG V C +LPF+LEKS+GNYYRLVT LDRE V +YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
+NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ SGG L +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVS 810
+QE EK++ LL + D E K E QVS
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVS 810
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1137 bits (2942), Expect = 0.0
Identities = 584/805 (72%), Positives = 661/805 (82%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
F E+LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
ELVLERALDRE++ H LVL ASDGG P S + I V VLD NDN P+F P YRV V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+P GTRLLTV A+DPDEG N +V+Y K+ K +F LN +GE+SI KSLDYE+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
FYE++I+A+D LL R K+L++V DVNDN PE+ ITSL S V E G IA + VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
D+DSG+NGQV + NLPFKLEKSI YYRLVT LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS NA++TY++T
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 TSVDFHEYKNEADHGQVSLVLCLLL 817
+ D E K +++ QVSL + L++
Sbjct: 793 ITQDLLEMKGDSNLLQVSLFISLII 817
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1136 bits (2938), Expect = 0.0
Identities = 580/803 (72%), Positives = 663/803 (82%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MA PQ P+R E +LL LLGTLW QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK L+ VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EI+DINDN P+F E+LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQ+ +G PELVLE LDRE EA + LVLTA DGG P RSS +I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
+F P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN TGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS + +LDYE+ SFYE+ ++A D L R K+LI++ DVNDN PEV++TS + E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
PGTVIA V D+DSG NG V C +LPF+LEKS+GNYYRLVT LDRE V +YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
+NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ SGG L +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
+QE EK++ LL + D E K E
Sbjct: 781 NQESYEKSEPLLITQDLLETKGE 803
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1132 bits (2927), Expect = 0.0
Identities = 577/803 (71%), Positives = 656/803 (81%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAP +RP L+ +C LLG L EI QI YSV EE ++GS VGNI+KDLGL PR+LA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGRTQLFALNPRSG+L+TAGRIDREELC +SP C+ N+ L+ED K+ VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EIID+NDN P F E E+K+ E PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQ+G +G PELVLERALDREEEA HHLVLTA DGG P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF P Y V V EN+P GTRLLTV A+DPDEG NG V Y FRK+ +K + LFQLN +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
I+I LDYE+ FY+++++A D L R+K+L++V D NDN PEV +TSL S V E+S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
PGTVIA +VHD DSG NG V C DNLPF LEK+ GNYYRL+T + LDRE VS YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTET I+L V DINDNPPTFPHASYSAYI ENN RGASI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA++TYS+ EDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQLL+TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVADSIP+VL +LGSLKPS DP+DS LTLYLVVAVAA+SCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLL G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIF QP+YAD LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
S+E CEK++ LL + D E K +
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD 803
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1132 bits (2927), Expect = 0.0
Identities = 577/803 (71%), Positives = 656/803 (81%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAAP +RP L+ +C LLG L EI QI YSV EE ++GS VGNI+KDLGL PR+LA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGRTQLFALNPRSG+L+TAGRIDREELC +SP C+ N+ L+ED K+ VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EIID+NDN P F E E+K+ E PGAR+PLPEA DPDVGVNSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DVQ+G +G PELVLERALDREEEA HHLVLTA DGG P RS T RI + ++DTNDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF P Y V V EN+P GTRLLTV A+DPDEG NG V Y FRK+ +K + LFQLN +G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
I+I LDYE+ FY+++++A D L R+K+L++V D NDN PEV +TSL S V E+S
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
PGTVIA +VHD DSG NG V C DNLPF LEK+ GNYYRL+T + LDRE VS YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
TV A+D GTPPLSTET I+L V DINDNPPTFPHASYSAYI ENN RGASI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA++TYS+ EDT QGAPLSSY+SINS+TG+LYAL SFDYEQ RDLQLL+TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVADSIP+VL +LGSLKPS DP+DS LTLYLVVAVAA+SCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLL G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIF QP+YAD LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
S+E CEK++ LL + D E K +
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD 803
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1130 bits (2924), Expect = 0.0
Identities = 579/793 (73%), Positives = 653/793 (82%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
F E+LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
ELVLERALDRE++ H LVL ASDGG P S + I V VLD NDN P+F P YRV V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+P GTRLLTV A+DPDEG N +V+Y K+ K +F LN +GE+SI KSLDYE+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
FYE++I+A+D LL R K+L++V DVNDN PE+ ITSL S V E G IA + VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
D+DSG+NGQV + NLPFKLEKSI YYRLVT LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS NA++TY++T
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 TSVDFHEYKNEAD 805
+ D E K +++
Sbjct: 793 ITQDLLEMKGDSN 805
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1126 bits (2912), Expect = 0.0
Identities = 578/803 (71%), Positives = 658/803 (81%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MA+P GEL+L LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EIIDINDN P+F+ E+L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DV +G +G PELVLE+ LDRE+E H L+LTA DGG P S T I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
+F Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR EK + FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS +SLDYEE FY ME+ A+D GAL+ K++++V+DVNDN PEVI+TSL S + E+
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGTVIA SVHD DSG+NG++ C NLPFKLEKS+ NYY L+T + LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
T+ D GTPPLSTE+ I L VAD+NDNPP FP ASYS + ENN RG SIFS+TAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGS+K +DP D LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
S+E CEK++ LL S K E
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEE 803
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1126 bits (2912), Expect = 0.0
Identities = 578/803 (71%), Positives = 658/803 (81%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MA+P GEL+L LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EIIDINDN P+F+ E+L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DV +G +G PELVLE+ LDRE+E H L+LTA DGG P S T I VTVLD NDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
+F Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR EK + FQL+ N GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
IS +SLDYEE FY ME+ A+D GAL+ K++++V+DVNDN PEVI+TSL S + E+
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGTVIA SVHD DSG+NG++ C NLPFKLEKS+ NYY L+T + LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
T+ D GTPPLSTE+ I L VAD+NDNPP FP ASYS + ENN RG SIFS+TAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGS+K +DP D LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
S+E CEK++ LL S K E
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEE 803
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1107 bits (2864), Expect = 0.0
Identities = 570/801 (71%), Positives = 655/801 (81%), Gaps = 2/801 (0%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L+LL LLGTLWE G QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
QLFALNPRSGSL+TAGRIDREELC + +C +N++ L+EDK K++GVE+E+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
F+ +LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F P YR V
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+ GT+LL V A+DPDEG+N +V Y FR +++K +F+L+ N+G IS LD+EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
FY+ME+QA D R K+LI+V DVNDN PEV++TSL S V ENS GT+IA L+V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT LDRE V YNITV A+D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+ + S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE EK++ LL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 TSVDFHEYKNEADHGQVSLVL 813
S D ++ HG + + L
Sbjct: 793 LSGD--SVFSKDSHGLIEVSL 811
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1107 bits (2863), Expect = 0.0
Identities = 567/784 (72%), Positives = 648/784 (82%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L+LL LLGTLWE G QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
QLFALNPRSGSL+TAGRIDREELC + +C +N++ L+EDK K++GVE+E+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
F+ +LE+KI+E A R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+ P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F P YR V
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+ GT+LL V A+DPDEG+N +V Y FR +++K +F+L+ N+G IS LD+EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
FY+ME+QA D R K+LI+V DVNDN PEV++TSL S V ENS GT+IA L+V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT LDRE V YNITV A+D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+ + S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE EK++ LL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 TSVD 796
S D
Sbjct: 793 LSGD 796
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1103 bits (2853), Expect = 0.0
Identities = 564/795 (70%), Positives = 654/795 (82%), Gaps = 4/795 (0%)
Query: 6 SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
+R +RG+ L+LLC LGTL QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 62 HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC C +N+ LVED K++GVE+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
++ +GA NPELVLE +LDRE+EAAH L+LTA DGG P R V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
F +YRV V EN+ GTR+L V A+DPDEGING+V Y FR + K + +FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
+ SLD+E+ FYEMEIQ +D G L T +LI+V DVNDN PE+ ITS + +LENS
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
PGTVIA L+V DQDSG+NGQV C+ ++LPFKLEK+ GNYY+L+T + LDRE V YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
+ A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 602 AWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662
Query: 662 VAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHK 721
VAVADSIPEVL +LGSL+ + S L+LYLVVAVAA+SC+FL FV VLL LRL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722
Query: 722 SRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLIS 781
SRLLQ S G L G+P SHFVGV+ VQAFLQTYS EVSL ADS+KSHLIFPQPNY D LIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782
Query: 782 QEGCEKNDSLLTSVD 796
QE CEK++ LL + D
Sbjct: 783 QESCEKSEPLLIAED 797
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1103 bits (2853), Expect = 0.0
Identities = 564/795 (70%), Positives = 654/795 (82%), Gaps = 4/795 (0%)
Query: 6 SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
+R +RG+ L+LLC LGTL QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 62 HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC C +N+ LVED K++GVE+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
++ +GA NPELVLE +LDRE+EAAH L+LTA DGG P R V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
F +YRV V EN+ GTR+L V A+DPDEGING+V Y FR + K + +FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
+ SLD+E+ FYEMEIQ +D G L T +LI+V DVNDN PE+ ITS + +LENS
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
PGTVIA L+V DQDSG+NGQV C+ ++LPFKLEK+ GNYY+L+T + LDRE V YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
+ A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 602 AWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662
Query: 662 VAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHK 721
VAVADSIPEVL +LGSL+ + S L+LYLVVAVAA+SC+FL FV VLL LRL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722
Query: 722 SRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLIS 781
SRLLQ S G L G+P SHFVGV+ VQAFLQTYS EVSL ADS+KSHLIFPQPNY D LIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782
Query: 782 QEGCEKNDSLLTSVD 796
QE CEK++ LL + D
Sbjct: 783 QESCEKSEPLLIAED 797
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1094 bits (2830), Expect = 0.0
Identities = 565/791 (71%), Positives = 633/791 (80%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L+LLC L L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA GVRIVSRGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
LFALNPRSGSLITA RIDREELCAQS CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
FQ+E+LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSLDVQ G +G +P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
E+VL+ LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F Y + V
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+P GT+LL V A+DPDEG NG+V Y F ++ + +F+L+ TGEIS + LD+EE
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Y ME+QA+D L+ + K+LI V DVNDN PEV ITS+ + V EN PGT+IA +SVH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
DQDSG NG C+ NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I+L V DINDN P F SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+PS PNDS LTLYLVVA AA+SCVFLAFV VLL RLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
+P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK L
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
Query: 793 TSVDFHEYKNE 803
E K E
Sbjct: 793 APQSLLEDKKE 803
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1094 bits (2830), Expect = 0.0
Identities = 565/791 (71%), Positives = 633/791 (80%)
Query: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
L+LLC L L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA GVRIVSRGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
LFALNPRSGSLITA RIDREELCAQS CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
FQ+E+LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSLDVQ G +G +P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
E+VL+ LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F Y + V
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
EN+P GT+LL V A+DPDEG NG+V Y F ++ + +F+L+ TGEIS + LD+EE
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Y ME+QA+D L+ + K+LI V DVNDN PEV ITS+ + V EN PGT+IA +SVH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
DQDSG NG C+ NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
STET I+L V DINDN P F SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
+LGSL+PS PNDS LTLYLVVA AA+SCVFLAFV VLL RLRRWHKSRLLQ SGG L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
+P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK L
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
Query: 793 TSVDFHEYKNE 803
E K E
Sbjct: 793 APQSLLEDKKE 803
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1091 bits (2821), Expect = 0.0
Identities = 563/809 (69%), Positives = 640/809 (79%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAA Q P +L+LLC LL TLWE GQIRYSV EE D+GSFVGNI+KDLGL+P LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS CL+N N L+EDK ++ VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EI DINDN P+F VE+LE+KI+E PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DV+ G +G PELVLER+LDREEEA HHLVL ASDGG P S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF P YR+ + EN GTR+LTVTA+D DEG +V Y K + + +F+L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
++I K LDYE+ +F+E++I+A+D LL R K++++V DVNDN PE +TS S V E+S
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGT+I +VHD+DSG+N C ++LPFKLEKS+ NYYRLVT + LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
T+ A D G P LST+ I L VADINDN P F SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA VTYS EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQV 809
SQE CEK D L E + E QV
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQV 809
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1089 bits (2817), Expect = 0.0
Identities = 562/808 (69%), Positives = 639/808 (79%)
Query: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
MAA Q P +L+LLC LL TLWE GQIRYSV EE D+GSFVGNI+KDLGL+P LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
+ GVRIVSRGR+QLFALNPRSGSL+TA RIDREELCAQS CL+N N L+EDK ++ VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
+EI DINDN P+F VE+LE+KI+E PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
DV+ G +G PELVLER+LDREEEA HHLVL ASDGG P S T RI V VLD NDNAP
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
VF P YR+ + EN GTR+LTVTA+D DEG +V Y K + + +F+L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
++I K LDYE+ +F+E++I+A+D LL R K++++V DVNDN PE +TS S V E+S
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
LPGT+I +VHD+DSG+N C ++LPFKLEKS+ NYYRLVT + LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
T+ A D G P LST+ I L VADINDN P F SYS YI ENN RGAS+FS+TAHDPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
S +NA VTYS EDT+QGAPLSSYISINSDTGVLYAL+SFDYEQ+RDLQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
KSRLLQ SGG L G+ +SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQ 808
SQE CEK D L E + E Q
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
[Homo sapiens]
Length = 750
Score = 852 bits (2202), Expect = 0.0
Identities = 431/624 (69%), Positives = 509/624 (81%), Gaps = 4/624 (0%)
Query: 6 SRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAK 61
+R +RG+ L+LLC LGTL QIRYSVPEET+KGSFVGNISKDLGL+PR+LAK
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 62 HGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEI 121
GVRIVSRG+TQLFA+NPRSGSLITAGRIDREELC C +N+ LVED K++GVE+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 122 EIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLD 181
EIIDINDN P FQ +++E+K++E A+PGAR+ LP A DPDVGVNSLQSYQLSPN++FSL
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 182 VQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPV 241
++ +GA NPELVLE +LDRE+EAAH L+LTA DGG P R V I V VLD ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 242 FPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEI 301
F +YRV V EN+ GTR+L V A+DPDEGING+V Y FR + K + +FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 302 SIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSL 361
+ SLD+E+ FYEMEIQ +D G L T +LI+V DVNDN PE+ ITS + +LENS
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 362 PGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNIT 421
PGTVIA L+V DQDSG+NGQV C+ ++LPFKLEK+ GNYY+L+T + LDRE V YNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 422 VMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDS 481
+ A+D G+PPLS ET + L+VAD NDNPP FPH+SYSAYI ENN RGASIFS+TA DPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 482 QENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPP 541
++NA VTYS+T+DT+QG PLSSY+SINS+TGVLYALQSFDYEQ RDL+L V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 542 LSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQN 601
LSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 602 AWLSYRLLKASEPGLFSVGLHTGE 625
AWLSYRLLKASEPGLF+VG HTGE
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGE 626
Score = 162 bits (411), Expect = 9e-40
Identities = 176/621 (28%), Positives = 262/621 (42%), Gaps = 69/621 (11%)
Query: 151 RYPLPEAVDPDVGVNSL-QSYQLSPNHHFSLDVQTGDNG-----AINPE---LVLERALD 201
RY +PE + V ++ + L P V+ G A+NP L+ +D
Sbjct: 33 RYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKTQLFAVNPRSGSLITAGRID 92
Query: 202 REE------EAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENM 255
REE ++ L D K + V ++D NDNAP F +KV E+
Sbjct: 93 REELCETVSSCFLNMELLVEDTLK-----IYGVEVEIIDINDNAPSFQEDEVEIKVSEHA 147
Query: 256 PPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTG--EISIAKSLDYEECS 313
PG R A DPD G+N +Y+ N L + E+ + SLD E+ +
Sbjct: 148 IPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPELVLEGSLDREKEA 207
Query: 314 FYEMEIQAEDVGALL--GRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSV 371
+ + + A D G + G + + V DVND+ P + V EN GT + ++
Sbjct: 208 AHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPENISSGTRVLMVNA 267
Query: 372 HDQDSGKNGQVVCYTRDNLP------FKLEKSIGNYYRLVTRKYLDRENVSIYNITVMAS 425
D D G NG+V+ Y+ N+ F+L+ G + R LD E Y + +
Sbjct: 268 TDPDEGINGEVM-YSFRNMESKASEIFQLDSQTGE---VQVRGSLDFEKYRFYEMEIQGQ 323
Query: 426 DLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENA 485
D G L T T + + V D+NDN P S ILEN+ G I L D DS EN
Sbjct: 324 DGGG--LFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQDSGENG 381
Query: 486 QVTYSVTEDTLQGAPLSSYISINSDTGVLYAL---QSFDYEQIRDLQLLVTASDSGDPPL 542
QV+ + P + G Y L + D E ++ + +TA+D G PPL
Sbjct: 382 QVSCFI--------PNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
S+ + L V D NDN P ++P S+ P + RG + V A+D DS QNA
Sbjct: 434 SAETHVWLNVADDNDNPP--VFPH-----SSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 603 WLSYRLLKASEPGL-----FSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSAT 657
++Y L + G+ S+ +TG + ++ L V +D G PPLS+
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 658 VTLTVAVA---DSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGL 714
V+L++ V D+ PE+ L P++ P D S + L A + VAV
Sbjct: 547 VSLSLFVLDQNDNAPEI------LYPAL-PTDGSTGVELAPRSAEPGYLVTKVVAVDKDS 599
Query: 715 RLRRWHKSRLLQDSGGRLVGV 735
W RLL+ S L V
Sbjct: 600 GQNAWLSYRLLKASEPGLFAV 620
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 659 bits (1700), Expect = 0.0
Identities = 337/688 (48%), Positives = 459/688 (66%), Gaps = 3/688 (0%)
Query: 30 QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
QIRYS+PEE K S VGN++KDLGL R L +R+ + + F +NP SG L+ + R
Sbjct: 32 QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89
Query: 90 IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
IDRE++C + P C+++ +T+ E+ +F + + + DINDN P F+ + +KI E PG
Sbjct: 90 IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149
Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
+PL A+D DVG NSLQ Y L+ N +F L + +G PEL+L+ +LDREE + H
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209
Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
LVLTA DGG PP+S T +I + V D NDN PVF +YRV + E++PPG +L VTA+D
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269
Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
DEGIN ++ Y F ++E+ F LNE TGEI+ LD+E S Y + I+A+D G L
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329
Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
+ + + D ND PEVI+TS+ +P+ E+S PGTVIA + D+DSG+NG+V C N
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389
Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
F L+ S NYY+LVT LDRE + YN+T+ A+D G PPLS+ + LH++D+NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449
Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
P F SY ++ ENN GASI ++A DPD + QV+YS+ L+ + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509
Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
+GV++A ++FD+EQ+R +L + A D G P LS+N+SL + V D NDNAP +LYPAL
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569
Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
DGS ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL +L + DP + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688
Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLR 717
YLVVA+A IS +F V + + LRLR
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLR 716
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 659 bits (1700), Expect = 0.0
Identities = 337/688 (48%), Positives = 459/688 (66%), Gaps = 3/688 (0%)
Query: 30 QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
QIRYS+PEE K S VGN++KDLGL R L +R+ + + F +NP SG L+ + R
Sbjct: 32 QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89
Query: 90 IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
IDRE++C + P C+++ +T+ E+ +F + + + DINDN P F+ + +KI E PG
Sbjct: 90 IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149
Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
+PL A+D DVG NSLQ Y L+ N +F L + +G PEL+L+ +LDREE + H
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209
Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
LVLTA DGG PP+S T +I + V D NDN PVF +YRV + E++PPG +L VTA+D
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269
Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
DEGIN ++ Y F ++E+ F LNE TGEI+ LD+E S Y + I+A+D G L
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329
Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
+ + + D ND PEVI+TS+ +P+ E+S PGTVIA + D+DSG+NG+V C N
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389
Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
F L+ S NYY+LVT LDRE + YN+T+ A+D G PPLS+ + LH++D+NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449
Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
P F SY ++ ENN GASI ++A DPD + QV+YS+ L+ + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509
Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
+GV++A ++FD+EQ+R +L + A D G P LS+N+SL + V D NDNAP +LYPAL
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569
Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
DGS ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL +L + DP + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688
Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLR 717
YLVVA+A IS +F V + + LRLR
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLR 716
>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 655 bits (1691), Expect = 0.0
Identities = 338/689 (49%), Positives = 457/689 (66%), Gaps = 7/689 (1%)
Query: 30 QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
QIRY +PEE KGS VGN++ DLG ++L +R+ S F ++ SG L+ + R
Sbjct: 32 QIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPYFTVSAESGELLVSSR 89
Query: 90 IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
+DREE+C + P C + + E+ + V +EI DIND+ PKF E++I+E A PG
Sbjct: 90 LDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPG 149
Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
R+ L A D D+G+NSLQ Y+LS N FSL ++ +G+ PEL LE+ LDRE+++ H
Sbjct: 150 TRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHR 209
Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
LVLTA DGG PP S T + + V D NDN PVF +YRV + EN+PPGT +L V+A+D
Sbjct: 210 LVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQ 269
Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
DEGIN ++ Y F + + +F LN +GEI+ K LD+EE Y M ++ D G L+
Sbjct: 270 DEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVA 325
Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
+ + I+++D NDN PEV SL +LEN++PGT+IA + +HDQDSG+NG+V C +
Sbjct: 326 QCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGE 385
Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
+PFK+ S N Y+LVT LDRE YN+T+ A+D G PPLS+ + LH+ D+NDN
Sbjct: 386 VPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNA 445
Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
P F ASY + ENN GASI + A D D N QV+YS+ L+ L+SY+S+++
Sbjct: 446 PVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSA 505
Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
+GV++A ++FDYEQ+R +L + A D G P LS+N+SL + V D+NDNAP +LYPAL
Sbjct: 506 QSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGP 565
Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
DGS ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 566 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL ++ DP + L
Sbjct: 626 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDP-QAEL 684
Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLRR 718
YLVVA+A IS +FL V + + LRLRR
Sbjct: 685 QFYLVVALALISVLFLLAVILAVALRLRR 713
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 655 bits (1691), Expect = 0.0
Identities = 338/689 (49%), Positives = 457/689 (66%), Gaps = 7/689 (1%)
Query: 30 QIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGR 89
QIRY +PEE KGS VGN++ DLG ++L +R+ S F ++ SG L+ + R
Sbjct: 32 QIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPYFTVSAESGELLVSSR 89
Query: 90 IDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPG 149
+DREE+C + P C + + E+ + V +EI DIND+ PKF E++I+E A PG
Sbjct: 90 LDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPG 149
Query: 150 ARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHH 209
R+ L A D D+G+NSLQ Y+LS N FSL ++ +G+ PEL LE+ LDRE+++ H
Sbjct: 150 TRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHR 209
Query: 210 LVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDP 269
LVLTA DGG PP S T + + V D NDN PVF +YRV + EN+PPGT +L V+A+D
Sbjct: 210 LVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQ 269
Query: 270 DEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLG 329
DEGIN ++ Y F + + +F LN +GEI+ K LD+EE Y M ++ D G L+
Sbjct: 270 DEGINSEITYSFYRTGQ----IFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVA 325
Query: 330 RTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDN 389
+ + I+++D NDN PEV SL +LEN++PGT+IA + +HDQDSG+NG+V C +
Sbjct: 326 QCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGE 385
Query: 390 LPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNP 449
+PFK+ S N Y+LVT LDRE YN+T+ A+D G PPLS+ + LH+ D+NDN
Sbjct: 386 VPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNA 445
Query: 450 PTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINS 509
P F ASY + ENN GASI + A D D N QV+YS+ L+ L+SY+S+++
Sbjct: 446 PVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSA 505
Query: 510 DTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPT 569
+GV++A ++FDYEQ+R +L + A D G P LS+N+SL + V D+NDNAP +LYPAL
Sbjct: 506 QSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGP 565
Query: 570 DGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
DGS ++ PR+AE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 566 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSL 689
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL ++ DP + L
Sbjct: 626 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDP-QAEL 684
Query: 690 TLYLVVAVAAISCVFLAFVAVLLGLRLRR 718
YLVVA+A IS +FL V + + LRLRR
Sbjct: 685 QFYLVVALALISVLFLLAVILAVALRLRR 713
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 653 bits (1684), Expect = 0.0
Identities = 335/688 (48%), Positives = 463/688 (67%), Gaps = 3/688 (0%)
Query: 31 IRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRI 90
IRYS+PEE KGS VGN++KDLGL ++ +R+ + F+++ SG L+ RI
Sbjct: 33 IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH--FSVDAESGDLLVKNRI 90
Query: 91 DREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGA 150
DRE++C + RC + + +VE+ +F V + I D+ND+ P+F +++ ++I E A G
Sbjct: 91 DREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGT 150
Query: 151 RYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHHL 210
R L A DPD+ +NS++ Y+++ N +FSL V+ +G PEL LE+ LDREE+ +H L
Sbjct: 151 RLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLLDREEQRSHSL 210
Query: 211 VLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPD 270
+LTA DGG PPRS+T I ++V DTNDN PVF YR+ + EN+PPG+ +L VTA+D D
Sbjct: 211 ILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQD 270
Query: 271 EGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQAEDVGALLGR 330
EG+N ++ Y FR + +F L+E TG I +S D+E+ Y ME++A+D G L +
Sbjct: 271 EGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQ 330
Query: 331 TKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNL 390
K++I + D NDN PE+IITSL +LENS PG V+A D D G NG+V C ++
Sbjct: 331 CKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDI 390
Query: 391 PFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPLSTETQIALHVADINDNPP 450
PFK+ S NYY+LVT LDRE YN+T++A+D G PPLS+ I L+VADINDN P
Sbjct: 391 PFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP 450
Query: 451 TFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINSD 510
F SY ++ ENN GASI ++A DPD N ++YS+ L+ +SSY+S+++
Sbjct: 451 VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLAVSSYVSVSAQ 510
Query: 511 TGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTD 570
+GV++A ++FD+EQ+R L + A D G P LS+N+SL + V D+NDNAP +LYPAL D
Sbjct: 511 SGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPALGPD 570
Query: 571 GSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTAR 630
GS ++ PRSAE GYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTAR
Sbjct: 571 GSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 630
Query: 631 ALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLT 690
AL DRDA +Q L+VAV+D GQPPLSAT TL + AD++ E+L +L S +P + + L
Sbjct: 631 ALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDL-SDRPVLSDPQAELQ 689
Query: 691 LYLVVAVAAISCVFLAFVAVLLGLRLRR 718
YLVVA+A IS +FL V + + LRLRR
Sbjct: 690 FYLVVALALISVLFLLAVILAIALRLRR 717
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,158,107
Number of Sequences: 37866
Number of extensions: 1409025
Number of successful extensions: 10089
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3039
Number of HSP's gapped (non-prelim): 652
length of query: 820
length of database: 18,247,518
effective HSP length: 111
effective length of query: 709
effective length of database: 14,044,392
effective search space: 9957473928
effective search space used: 9957473928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.