Guide to the Human Genome
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Search of human proteins with 71896711

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71896711 ceramide kinase-like isoform d [Homo sapiens]
         (463 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71896711 ceramide kinase-like isoform d [Homo sapiens]             936   0.0  
gi|41680688 ceramide kinase-like isoform a [Homo sapiens]             867   0.0  
gi|237757361 ceramide kinase-like isoform g [Homo sapiens]            830   0.0  
gi|71896725 ceramide kinase-like isoform c [Homo sapiens]             828   0.0  
gi|71896723 ceramide kinase-like isoform b [Homo sapiens]             529   e-150
gi|20336726 ceramide kinase [Homo sapiens]                            116   4e-26
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    33   0.42 
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    33   0.42 
gi|4502897 cleft lip and palate associated transmembrane protein...    32   1.6  
gi|8922701 acylglycerol kinase [Homo sapiens]                          30   3.5  
gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo s...    30   3.5  
gi|33356148 formin-like 1 [Homo sapiens]                               30   3.5  
gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens]             30   4.6  
gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens]             30   4.6  
gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens]              30   4.6  
gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens]             30   4.6  
gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]                29   7.9  
gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...    29   7.9  
gi|7661950 SH2 domain binding protein 1 [Homo sapiens]                 29   7.9  

>gi|71896711 ceramide kinase-like isoform d [Homo sapiens]
          Length = 463

 Score =  936 bits (2420), Expect = 0.0
 Identities = 463/463 (100%), Positives = 463/463 (100%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTRSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF 240
           EATQVYYEKVEPLLKLAGIKTDVTRSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVTRSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF 240

Query: 241 STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF 300
           STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF
Sbjct: 241 STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF 300

Query: 301 NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM 360
           NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM
Sbjct: 301 NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM 360

Query: 361 ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET 420
           ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET
Sbjct: 361 ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET 420

Query: 421 ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463
           ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 421 ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463


>gi|41680688 ceramide kinase-like isoform a [Homo sapiens]
          Length = 532

 Score =  867 bits (2241), Expect = 0.0
 Identities = 449/532 (84%), Positives = 455/532 (85%), Gaps = 69/532 (12%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVT-----------------------------RSTNVLA 211
           EATQVYYEKVEPLLKLAGIKTDVT                              S + +A
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGFDGVVCVGGDGSASEVA 240

Query: 212 HSL-----------------------------HGVPHVITATLH-----------IIMGH 231
           H+L                              G  +V+  +LH           IIMGH
Sbjct: 241 HALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGH 300

Query: 232 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 291
           VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE
Sbjct: 301 VQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAE 360

Query: 292 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 351
           DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP
Sbjct: 361 DCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAP 420

Query: 352 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 411
           NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY
Sbjct: 421 NTRLNNGSMALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGY 480

Query: 412 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463
           NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 481 NPEEEEDETASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 532


>gi|237757361 ceramide kinase-like isoform g [Homo sapiens]
          Length = 514

 Score =  830 bits (2144), Expect = 0.0
 Identities = 429/514 (83%), Positives = 441/514 (85%), Gaps = 51/514 (9%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQ---- 176
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILA       +L +L   +    
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAVMEYEGHALSLLKECELQGF 180

Query: 177 --SHKKEATQVYY---------EKVEPLL---------------------KLAGIKTD-- 202
              H+K    +++         + +EP +                     K AG++TD  
Sbjct: 181 DGGHRKPLFAIHWSVQRLFTGMQTLEPSVVCVGGDGSASEVAHALLLRAQKNAGMETDRI 240

Query: 203 -------------VTRSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRF 249
                           STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRF
Sbjct: 241 LTPVRAQLPLGLIPAGSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRF 300

Query: 250 GFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQER 309
           GFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQER
Sbjct: 301 GFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQER 360

Query: 310 RAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTS 369
           RAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTS
Sbjct: 361 RAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTS 420

Query: 370 RPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWN 429
           RPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWN
Sbjct: 421 RPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWN 480

Query: 430 VDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463
           VDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 481 VDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 514


>gi|71896725 ceramide kinase-like isoform c [Homo sapiens]
          Length = 419

 Score =  828 bits (2140), Expect = 0.0
 Identities = 419/463 (90%), Positives = 419/463 (90%), Gaps = 44/463 (9%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAG                   
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAG------------------- 161

Query: 181 EATQVYYEKVEPLLKLAGIKTDVTRSTNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF 240
                                    STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF
Sbjct: 162 -------------------------STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTF 196

Query: 241 STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF 300
           STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF
Sbjct: 197 STAGKLLRFGFSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPF 256

Query: 301 NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM 360
           NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM
Sbjct: 257 NSSDDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSM 316

Query: 361 ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET 420
           ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET
Sbjct: 317 ALIIARNTSRPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDET 376

Query: 421 ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 463
           ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK
Sbjct: 377 ASENCFPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEEMIPK 419


>gi|71896723 ceramide kinase-like isoform b [Homo sapiens]
          Length = 558

 Score =  529 bits (1362), Expect = e-150
 Identities = 258/258 (100%), Positives = 258/258 (100%)

Query: 206 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 265
           STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA
Sbjct: 301 STNVLAHSLHGVPHVITATLHIIMGHVQLVDVCTFSTAGKLLRFGFSAMFGFGGRTLALA 360

Query: 266 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 325
           EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM
Sbjct: 361 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLPFNSSDDVQERRAQGSPKSDCNDQWQM 420

Query: 326 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 385
           IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN
Sbjct: 421 IQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTSRPEFIKHLKRYASVKN 480

Query: 386 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 445
           QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL
Sbjct: 481 QFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASENCFPWNVDGDLMEVASEVHIRL 540

Query: 446 HPRLISLYGGSMEEMIPK 463
           HPRLISLYGGSMEEMIPK
Sbjct: 541 HPRLISLYGGSMEEMIPK 558



 Score =  410 bits (1053), Expect = e-114
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60
           MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD
Sbjct: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCD 60

Query: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120
           VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI
Sbjct: 61  VVLSERALRWRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGI 120

Query: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180
           TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK
Sbjct: 121 TLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKK 180

Query: 181 EATQVYYEKVEPLLKLAGIKTDVT 204
           EATQVYYEKVEPLLKLAGIKTDVT
Sbjct: 181 EATQVYYEKVEPLLKLAGIKTDVT 204


>gi|20336726 ceramide kinase [Homo sapiens]
          Length = 537

 Score =  116 bits (291), Expect = 4e-26
 Identities = 121/530 (22%), Positives = 211/530 (39%), Gaps = 128/530 (24%)

Query: 48  LRGIFEIGRDSCDVVLSE-RALR--WRPIQPERPAGDSKYDLLCKEEFIELKDIFSVKLK 104
           L+ +  + +  C V L   RAL   WR   P   A  +    +   E I +++   V  K
Sbjct: 10  LQSVLWVKQQRCAVSLEPARALLRWWRSPGPGAGAPGADACSVPVSEIIAVEET-DVHGK 68

Query: 105 RRCSVKQQRSGTLLGITLFICLKKEQNKLKNSTLDLINLSEDHCDIWFRQFKKILAGFPN 164
            + S K Q+       T+    +  +++ K + +      E  C +W +  +++L    +
Sbjct: 69  HQGSGKWQKMEKPYAFTVHCVKRARRHRWKWAQVTFWCPEEQLCHLWLQTLREMLEKLTS 128

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTD--VTRSTNVLAHSLH------- 215
           RPK L + +NP   K +  ++Y  KV PL  LA I TD  VT   N    +L+       
Sbjct: 129 RPKHLLVFINPFGGKGQGKRIYERKVAPLFTLASITTDIIVTEHANQAKETLYEINIDKY 188

Query: 216 ------GVPHVITATLHIIMGHVQ---------------------------LVDVCTFST 242
                 G   + +  LH ++G  Q                             D   +ST
Sbjct: 189 DGIVCVGGDGMFSEVLHGLIGRTQRSAGVDQNHPRAVLVPSSLRIGIIPAGSTDCVCYST 248

Query: 243 AG----------------------------KLLRFGFSAM-FGFGGRTLALAEKYRWMSP 273
            G                             LLR+  S + +GF G  +  +EK RW+  
Sbjct: 249 VGTSDAETSALHIVVGDSLAMDVSSVHHNSTLLRYSVSLLGYGFYGDIIKDSEKKRWLG- 307

Query: 274 NQRRDFAVVKALAKLKAEDCEISFLPFNSS------------------------DDVQER 309
             R DF+ +K        +  +SFLP   +                        ++ Q++
Sbjct: 308 LARYDFSGLKTFLSHHCYEGTVSFLPAQHTVGSPRDRKPCRAGCFVCRQSKQQLEEEQKK 367

Query: 310 RAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALIIARNTS 369
              G   ++  ++WQ++ G+FL ++   + C C  +PRGL+P   L +GS  LI+ R  S
Sbjct: 368 ALYGLEAAEDVEEWQVVCGKFLAINATNMSCACRRSPRGLSPAAHLGDGSSDLILIRKCS 427

Query: 370 RPEFIKHLKRYASVKNQFNFPFVETYTVEEVKVHPRNNTGGYNPEEEEDETASE------ 423
           R  F++ L R+ + ++QF+F FVE Y V++ +   ++        E+ED    E      
Sbjct: 428 RFNFLRFLIRHTNQQDQFDFTFVEVYRVKKFQFTSKH-------MEDEDSDLKEGGKKRF 480

Query: 424 --------NC------FPWNVDGDLMEVASEVHIRLHPRLISLYGGSMEE 459
                   +C        WN DG+++  +  + +R+H +L+ L+   +EE
Sbjct: 481 GHICSSHPSCCCTVSNSSWNCDGEVLH-SPAIEVRVHCQLVRLFARGIEE 529


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)

Query: 15  GGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSERALRWRPIQ 74
           GGR   APP AA  P A +  P   + A            G+ S  + L ++  R  PIQ
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAP-----------GQPSPVLQLQQKQSRISPIQ 332

Query: 75  PERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGITLFICLKKEQNKLK 134
             +P G    ++L + E+         +L+ R + + Q    L G        K   +LK
Sbjct: 333 --KPQGLDPVEILQEREY---------RLQARIAHRIQELENLPGSLPPDLRTKATVELK 381

Query: 135 NSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKKEATQVYYE 188
              L L+N          RQ ++ +     R  +L+  LN +++K+   Q   E
Sbjct: 382 --ALRLLNFQ--------RQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE 425


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)

Query: 15  GGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSERALRWRPIQ 74
           GGR   APP AA  P A +  P   + A            G+ S  + L ++  R  PIQ
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAP-----------GQPSPVLQLQQKQSRISPIQ 332

Query: 75  PERPAGDSKYDLLCKEEFIELKDIFSVKLKRRCSVKQQRSGTLLGITLFICLKKEQNKLK 134
             +P G    ++L + E+         +L+ R + + Q    L G        K   +LK
Sbjct: 333 --KPQGLDPVEILQEREY---------RLQARIAHRIQELENLPGSLPPDLRTKATVELK 381

Query: 135 NSTLDLINLSEDHCDIWFRQFKKILAGFPNRPKSLKILLNPQSHKKEATQVYYE 188
              L L+N          RQ ++ +     R  +L+  LN +++K+   Q   E
Sbjct: 382 --ALRLLNFQ--------RQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE 425


>gi|4502897 cleft lip and palate associated transmembrane protein 1
           [Homo sapiens]
          Length = 669

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 304 DDVQERRAQGSPKSDCNDQWQMIQGQFLNVSIMAIPCLCSVAPRGLAPNTRLNNGSMALI 363
           D   E + Q  P     + WQ+I+G    + I  I  + S   RG AP  +   G    +
Sbjct: 34  DPPAETQPQNPPAQPAPNAWQVIKGVLFRIFI--IWAISSWFRRGPAPQDQAGPGGAPRV 91

Query: 364 IARNTSRPEFIKHLKRYASVKNQF 387
            +RN    + + +L  Y S    F
Sbjct: 92  ASRNLFPKDTLMNLHVYISEHEHF 115


>gi|8922701 acylglycerol kinase [Homo sapiens]
          Length = 422

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 167 KSLKILLNPQSHKKEATQVYYEKVEPLLKLAG-----IKTDVTRSTNVLAHSLHGVPHVI 221
           K   + LNP + K +A  ++ +   P+L L+G     +KTD       L   +     +I
Sbjct: 61  KKATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTIVKTDYEGQAKKLLELMENTDVII 120

Query: 222 TA----TL-HIIMGHVQLVDVCTFS 241
            A    TL  ++ G ++  D  TFS
Sbjct: 121 VAGGDGTLQEVVTGVLRRTDEATFS 145


>gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo
            sapiens]
          Length = 1487

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 3    WRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVV 62
            W RR        G  E E PP AA    +L+ +P  + ++  +   RG  E  +DS D  
Sbjct: 945  WNRR-------PGNEERELPPAAAIGATSLVAAPHSSSSSPSKDSSRGETEERKDSDDEK 997

Query: 63   LSERALRWR 71
                   WR
Sbjct: 998  SDRNRPWWR 1006


>gi|33356148 formin-like 1 [Homo sapiens]
          Length = 1100

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 7   RNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSCDVVLSER 66
           R R S          PPE    PPA  T P   E   E +  +G+  I R   D V    
Sbjct: 444 RERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAV---- 499

Query: 67  ALRWRPIQPERPAG 80
           ++   P+    P+G
Sbjct: 500 SIEILPVAVATPSG 513


>gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens]
          Length = 384

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGI 199
           RP  + +LLNP+  K +A Q++   V+PLL  A I
Sbjct: 13  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEI 47


>gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens]
          Length = 384

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGI 199
           RP  + +LLNP+  K +A Q++   V+PLL  A I
Sbjct: 13  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEI 47


>gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens]
          Length = 398

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGI 199
           RP  + +LLNP+  K +A Q++   V+PLL  A I
Sbjct: 27  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEI 61


>gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens]
          Length = 470

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGI 199
           RP  + +LLNP+  K +A Q++   V+PLL  A I
Sbjct: 99  RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEI 133


>gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]
          Length = 450

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 14  EGGREEEAPPEAAAVPPALLTSPQQTEAAAERIL--LRGIFEIGR 56
           E   EEE  P+A  V PA   SP   +    R+L  LRG   +GR
Sbjct: 303 EEEEEEECEPQAVPVSPASACSPPLQQPQGSRVLATLRGQVLLGR 347


>gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           6 [Homo sapiens]
          Length = 395

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 1   MPWRRRRNRVSALEGGREEEAPPEAAAVPPALLTSPQQTEAAAERILLRGIFEIGRDSC- 59
           +PWRR  + +      R   +PP  +A P   ++S    EA  + +  R  F + R++C 
Sbjct: 111 LPWRRNLSDLFQWAVSRALCSPPACSAFPRGAISS----EAVCKPLCARQSFTLAREACR 166

Query: 60  ---DVVLSE 65
               VVL E
Sbjct: 167 SYSHVVLKE 175


>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
          Length = 1173

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 15/64 (23%)

Query: 155 FKKILAGFPNRPKSLKILLN-------------PQSHKKEATQVYYEKVEPLLKLAGI-- 199
           F+K+L  +PN  +++KIL +              + H K+ T+ Y + VE  ++LA I  
Sbjct: 364 FEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILE 423

Query: 200 KTDV 203
           +TD+
Sbjct: 424 QTDI 427


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,038,185
Number of Sequences: 37866
Number of extensions: 805310
Number of successful extensions: 2481
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2457
Number of HSP's gapped (non-prelim): 28
length of query: 463
length of database: 18,247,518
effective HSP length: 106
effective length of query: 357
effective length of database: 14,233,722
effective search space: 5081438754
effective search space used: 5081438754
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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