Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 70995319
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|70995319 nerve growth factor, beta polypeptide precursor
[Homo sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|70995319 nerve growth factor, beta polypeptide precursor [Hom... 493 e-140
gi|156630995 neurotrophin 3 isoform 1 preproprotein [Homo sapiens] 183 1e-46
gi|4505469 neurotrophin 3 isoform 2 preproprotein [Homo sapiens] 183 1e-46
gi|219842314 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842312 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842309 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842306 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842303 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842300 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842298 brain-derived neurotrophic factor isoform e [Homo s... 139 2e-33
gi|219842296 brain-derived neurotrophic factor isoform d preprop... 139 2e-33
gi|219842294 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842292 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842290 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|219842288 brain-derived neurotrophic factor isoform a preprop... 139 2e-33
gi|25306264 brain-derived neurotrophic factor isoform a prepropr... 139 2e-33
gi|25306261 brain-derived neurotrophic factor isoform c prepropr... 139 2e-33
gi|25306267 brain-derived neurotrophic factor isoform a prepropr... 139 2e-33
gi|25306257 brain-derived neurotrophic factor isoform a prepropr... 139 2e-33
gi|25306253 brain-derived neurotrophic factor isoform a prepropr... 139 2e-33
gi|25306235 brain-derived neurotrophic factor isoform b prepropr... 139 2e-33
gi|5453808 neurotrophin 5 preproprotein [Homo sapiens] 129 2e-30
gi|10190706 CDC-like kinase 4 [Homo sapiens] 30 1.9
gi|223718041 exocyst complex component 7 isoform 3 [Homo sapiens] 29 4.2
gi|4503743 flightless I homolog [Homo sapiens] 28 5.5
gi|239742580 PREDICTED: similar to Putative POM121-like protein ... 28 9.3
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 28 9.3
gi|195539368 coiled-coil domain containing 149 isoform 2 [Homo s... 28 9.3
>gi|70995319 nerve growth factor, beta polypeptide precursor [Homo
sapiens]
Length = 241
Score = 493 bits (1270), Expect = e-140
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA 60
MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA
Sbjct: 1 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA 60
Query: 61 ARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK 120
ARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK
Sbjct: 61 ARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK 120
Query: 121 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR 180
RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR
Sbjct: 121 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR 180
Query: 181 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR 240
DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR
Sbjct: 181 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR 240
Query: 241 A 241
A
Sbjct: 241 A 241
>gi|156630995 neurotrophin 3 isoform 1 preproprotein [Homo sapiens]
Length = 270
Score = 183 bits (464), Expect = 1e-46
Identities = 110/258 (42%), Positives = 148/258 (57%), Gaps = 21/258 (8%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD 45
MS+LFY + A+L GIQ + ++P + QA K ++ +
Sbjct: 14 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ 73
Query: 46 TALRRARSA--PAAAIAARVAGQTRNITVDPRLFKK-RRLRSPRVLFSTQPPREAADTQD 102
+ L +A + P A+ A Q I +D L ++ RR SPRVL S P E
Sbjct: 74 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL 132
Query: 103 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE 162
++ VG NRT R KR + H HRGE+SVCDS S+WV DK++A DI+G +V VLGE
Sbjct: 133 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE 191
Query: 163 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMD-GKQAAWR 221
+ NS KQYF+ET+C++ PV +GCRGID KHWNS C T+ T+V+ALT + K WR
Sbjct: 192 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR 251
Query: 222 FIRIDTACVCVLSRKAVR 239
+IRIDT+CVC LSRK R
Sbjct: 252 WIRIDTSCVCALSRKIGR 269
>gi|4505469 neurotrophin 3 isoform 2 preproprotein [Homo sapiens]
Length = 257
Score = 183 bits (464), Expect = 1e-46
Identities = 110/258 (42%), Positives = 148/258 (57%), Gaps = 21/258 (8%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD 45
MS+LFY + A+L GIQ + ++P + QA K ++ +
Sbjct: 1 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ 60
Query: 46 TALRRARSA--PAAAIAARVAGQTRNITVDPRLFKK-RRLRSPRVLFSTQPPREAADTQD 102
+ L +A + P A+ A Q I +D L ++ RR SPRVL S P E
Sbjct: 61 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL 119
Query: 103 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE 162
++ VG NRT R KR + H HRGE+SVCDS S+WV DK++A DI+G +V VLGE
Sbjct: 120 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE 178
Query: 163 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMD-GKQAAWR 221
+ NS KQYF+ET+C++ PV +GCRGID KHWNS C T+ T+V+ALT + K WR
Sbjct: 179 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR 238
Query: 222 FIRIDTACVCVLSRKAVR 239
+IRIDT+CVC LSRK R
Sbjct: 239 WIRIDTSCVCALSRKIGR 256
>gi|219842314 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842312 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842309 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842306 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842303 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842300 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842298 brain-derived neurotrophic factor isoform e [Homo
sapiens]
Length = 329
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 83 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 142
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 143 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 202
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 203 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 260
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 261 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 320
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 321 CTLTIKRGR 329
>gi|219842296 brain-derived neurotrophic factor isoform d
preproprotein [Homo sapiens]
Length = 276
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 30 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 89
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 90 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 149
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 150 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 207
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 208 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 267
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 268 CTLTIKRGR 276
>gi|219842294 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842292 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842290 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|219842288 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|25306264 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|25306261 brain-derived neurotrophic factor isoform c
preproprotein [Homo sapiens]
Length = 262
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 16 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 75
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 76 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 135
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 136 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 193
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 194 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 253
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 254 CTLTIKRGR 262
>gi|25306267 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|25306257 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|25306253 brain-derived neurotrophic factor isoform a
preproprotein [Homo sapiens]
Length = 247
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 1 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 60
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 61 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 120
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 121 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 178
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 179 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 238
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 239 CTLTIKRGR 247
>gi|25306235 brain-derived neurotrophic factor isoform b
preproprotein [Homo sapiens]
Length = 255
Score = 139 bits (350), Expect = 2e-33
Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 1 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA 58
M++LF T++ ++ ++A P E+N+ G P S++ +R + A
Sbjct: 9 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA 68
Query: 59 -----IAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF 113
+ + + + + + K L + RV+ S+Q P E L+
Sbjct: 69 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA 128
Query: 114 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK 171
N + R +R S RGE SVCDS+S WV DK TA D+ G V VL +V ++ K
Sbjct: 129 NMSMRVRRHSDPA--RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK 186
Query: 172 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACV 230
QYF+ETKC GCRGID +HWNS C TT ++V+ALTMD K+ WRFIRIDT+CV
Sbjct: 187 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV 246
Query: 231 CVLSRKAVR 239
C L+ K R
Sbjct: 247 CTLTIKRGR 255
>gi|5453808 neurotrophin 5 preproprotein [Homo sapiens]
Length = 210
Score = 129 bits (324), Expect = 2e-30
Identities = 77/181 (42%), Positives = 102/181 (56%), Gaps = 13/181 (7%)
Query: 71 TVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLD---FEVGGAAPFNRTHRSKRSSSHPI 127
T+ P L + L SPRV+ S P L+ F AP NR+ R S + P
Sbjct: 30 TLPPFLAPEWDLLSPRVVLSRGAPAGPPLLFLLEAGAFRESAGAPANRSRRGV-SETAPA 88
Query: 128 FHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEV-NINNSVFKQYFFETKCRDPNPVD 186
RGE +VCD+VS WV D+ TA D++G+EV VLGEV S +QYFFET+C+ N +
Sbjct: 89 SRRGELAVCDAVSGWVTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKADNAEE 148
Query: 187 -------SGCRGIDSKHWNSYCTTTHTFVKALTMDGK-QAAWRFIRIDTACVCVLSRKAV 238
GCRG+D +HW S C ++V+ALT D + + WR+IRIDTACVC L +
Sbjct: 149 GGPGAGGGGCRGVDRRHWVSECKAKQSYVRALTADAQGRVGWRWIRIDTACVCTLLSRTG 208
Query: 239 R 239
R
Sbjct: 209 R 209
>gi|10190706 CDC-like kinase 4 [Homo sapiens]
Length = 481
Score = 30.0 bits (66), Expect = 1.9
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 133 FSVCDSVSVWVGDKTTATDIKGKEVMVLGE--VNINNSVFKQYFFETKCRDPNPVDSGCR 190
+ +C S++ +K T TD+K + ++ + V NS K+ K D VD G
Sbjct: 268 YQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSA 327
Query: 191 GIDSKHWNSYCTTTH 205
D +H ++ +T H
Sbjct: 328 TYDDEHHSTLVSTRH 342
>gi|223718041 exocyst complex component 7 isoform 3 [Homo sapiens]
Length = 656
Score = 28.9 bits (63), Expect = 4.2
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 12 FLIGIQAEPHSESNVPAGHTIPQAHWTK---LQHSLDTALRRARSAPAAAIAARVAGQTR 68
F I+ +P E N+P T+ + LQ LD + A +A++V G T
Sbjct: 387 FADNIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLDF-----QETAGAMLASQVLGDTY 441
Query: 69 NITVDPR 75
NI +DPR
Sbjct: 442 NIPLDPR 448
>gi|4503743 flightless I homolog [Homo sapiens]
Length = 1269
Score = 28.5 bits (62), Expect = 5.5
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 35 AHWTKLQHSLDTALRRARSAPAAAIAARVAGQTRNITVDPRLFKKRRLR 83
A W + SL LR A ++PA AA AG DP + +K RLR
Sbjct: 387 AEWYNIDFSLQNQLRLAGASPATVAAAAAAGSGPK---DP-MARKMRLR 431
>gi|239742580 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 897
Score = 27.7 bits (60), Expect = 9.3
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 21 HSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIAA 61
HS IP T S D +RR RSAPAAA AA
Sbjct: 297 HSRDTAQVTSLIPA---TFTAASRDAGMRRTRSAPAAATAA 334
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 27.7 bits (60), Expect = 9.3
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 181 DPNPVDSGC--------RGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVC 231
D PVD C RG +KHW+S + K G + + + R+++ C C
Sbjct: 135 DDGPVDCDCPASCYRGHRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSC 193
>gi|195539368 coiled-coil domain containing 149 isoform 2 [Homo
sapiens]
Length = 529
Score = 27.7 bits (60), Expect = 9.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 49 RRARSAPAAAIAARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQD 102
++ R+ + + + G+ + DP L +R RSP + F QP AD +D
Sbjct: 333 KKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRSPLLKFVEQPTENKADPKD 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.132 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,137,140
Number of Sequences: 37866
Number of extensions: 384613
Number of successful extensions: 946
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 860
Number of HSP's gapped (non-prelim): 30
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.