Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CLK4 Sequence: fasta or formatted (481aa) NCBI GI: 10190706
Description:

CDC-like kinase 4

Referenced in:

Dual-Specificity Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7         13           2
 C cysteine            3.1         15           1
 D aspartate           7.1         34           2
 E glutamate           7.3         35           2
 F phenylalanine       3.7         18           2
 G glycine             4.2         20           1
 H histidine           7.9         38           2
 I isoleucine          5.0         24           1
 K lysine              6.7         32           3
 L leucine             7.1         34           2
 M methionine          2.3         11           2
 N asparagine          2.9         14           1
 P proline             2.9         14           1
 Q glutamine           3.5         17           1
 R arginine           10.2         49           3
 S serine              8.5         41           2
 T threonine           3.5         17           1
 V valine              5.6         27           2
 W tryptophan          1.2          6           1
 Y tyrosine            4.6         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDC-like kinase 4 
CLK1                  0.771   CDC-like kinase 1 isoform 2 
CLK1                  0.771   CDC-like kinase 1 isoform 1 
CLK2                  0.545   CDC-like kinase 2 
CLK3                  0.492   CDC-like kinase 3 isoform a 
CLK3                  0.492   CDC-like kinase 3 isoform b 
DYRK2                 0.182   dual-specificity tyrosine-(Y)-phosphorylation regul...
DYRK2                 0.182   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK3                 0.180   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK3                 0.180   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK4                 0.174   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1B                0.160   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.158   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.150   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1A                0.148   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.148   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.148   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.148   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.148   dual-specificity tyrosine-(Y)-phosphorylation regula...
HIPK2                 0.142   homeodomain interacting protein kinase 2 isoform 2 ...
HIPK2                 0.142   homeodomain interacting protein kinase 2 isoform 1 ...
HIPK3                 0.134   homeodomain interacting protein kinase 3 isoform 2 ...
HIPK3                 0.134   homeodomain interacting protein kinase 3 isoform 1 ...
PRPF4B                0.130   serine/threonine-protein kinase PRP4K 
HIPK1                 0.129   homeodomain-interacting protein kinase 1 isoform 1 [...
HIPK1                 0.129   homeodomain-interacting protein kinase 1 isoform 2 [...
HIPK4                 0.117   homeodomain interacting protein kinase 4 
CDKL5                 0.097   cyclin-dependent kinase-like 5 
CDKL5                 0.097   cyclin-dependent kinase-like 5 
MAPK14                0.090   mitogen-activated protein kinase 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press