Guide to the Human Genome
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Name: EXOC7 Sequence: fasta or formatted (656aa) NCBI GI: 223718041
Description:

exocyst complex component 7 isoform 3

Referenced in:

ADP-Ribosylation Factors
ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [735aa] exocyst complex component 7 isoform 4
alt prot [676aa] exocyst complex component 7 isoform 5
alt prot [707aa] exocyst complex component 7 isoform 6
alt prot [653aa] exocyst complex component 7 isoform 2
alt prot [684aa] exocyst complex component 7 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         35           2
 C cysteine            0.6          4           1
 D aspartate           6.2         41           3
 E glutamate           7.6         50           2
 F phenylalanine       3.5         23           1
 G glycine             4.6         30           2
 H histidine           2.4         16           2
 I isoleucine          6.6         43           2
 K lysine              8.4         55           2
 L leucine            11.0         72           2
 M methionine          1.7         11           1
 N asparagine          3.8         25           2
 P proline             4.1         27           1
 Q glutamine           5.9         39           2
 R arginine            4.7         31           1
 S serine              8.4         55           5
 T threonine           5.2         34           1
 V valine              5.8         38           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exocyst complex component 7 isoform 3 
EXOC7                 0.971   exocyst complex component 7 isoform 1 
EXOC7                 0.961   exocyst complex component 7 isoform 6 
EXOC7                 0.952   exocyst complex component 7 isoform 4 
EXOC7                 0.921   exocyst complex component 7 isoform 5 
EXOC7                 0.909   exocyst complex component 7 isoform 2 
C20orf95              0.009   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.009   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.009   PREDICTED: Rho GTPase-activating protein 18-like [H...
RAB14                 0.007   GTPase Rab14 
HIVEP1                0.006   human immunodeficiency virus type I enhancer bindin...
KIF15                 0.006   kinesin family member 15 
UGT3A1                0.006   UDP glycosyltransferase 3 family, polypeptide A1 [Ho...
ASCC3                 0.006   activating signal cointegrator 1 complex subunit 3 i...
ITGB4                 0.006   integrin beta 4 isoform 2 precursor 
ITGB4                 0.006   integrin beta 4 isoform 1 precursor 
ITGB4                 0.006   integrin beta 4 isoform 3 precursor 
SERPINA5              0.005   serine (or cysteine) proteinase inhibitor, clade A ...
PLCB1                 0.005   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.005   phosphoinositide-specific phospholipase C beta 1 iso...
LHX8                  0.005   LIM homeobox 8 
IQGAP2                0.005   IQ motif containing GTPase activating protein 2 [Ho...
SMC1A                 0.004   structural maintenance of chromosomes 1A 
NUF2                  0.004   NUF2, NDC80 kinetochore complex component 
NUF2                  0.004   NUF2, NDC80 kinetochore complex component 
ZC3H13                0.004   zinc finger CCCH-type containing 13 
ASPM                  0.004   asp (abnormal spindle)-like, microcephaly associate...
MNT                   0.004   MAX binding protein 
USP30                 0.004   ubiquitin specific peptidase 30 
IKIP                  0.004   IKK interacting protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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