Guide to the Human Genome
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Name: CDC25C Sequence: fasta or formatted (400aa) NCBI GI: 12408658
Description:

cell division cycle 25C isoform b

Referenced in:

Additional Cell Cycle Functions
Cyclins and Related Functions
Cytoskeleton
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [473aa] cell division cycle 25C isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         10           2
 C cysteine            2.8         11           1
 D aspartate           5.5         22           2
 E glutamate           8.0         32           2
 F phenylalanine       5.0         20           2
 G glycine             6.8         27           2
 H histidine           1.8          7           2
 I isoleucine          4.0         16           3
 K lysine              7.5         30           3
 L leucine            11.2         45           3
 M methionine          2.5         10           1
 N asparagine          3.8         15           1
 P proline             6.0         24           1
 Q glutamine           4.8         19           1
 R arginine            5.8         23           1
 S serine              9.5         38           2
 T threonine           4.0         16           2
 V valine              4.5         18           1
 W tryptophan          0.2          1           1
 Y tyrosine            4.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 25C isoform b 
CDC25C                0.803   cell division cycle 25C isoform a 
CDC25B                0.301   cell division cycle 25B isoform 1 
CDC25B                0.301   cell division cycle 25B isoform 3 
CDC25B                0.301   cell division cycle 25B isoform 2 
CDC25A                0.291   cell division cycle 25A isoform b 
CDC25A                0.291   cell division cycle 25A isoform a 
POLM                  0.014   DNA-directed DNA polymerase mu 
MAP1A                 0.014   microtubule-associated protein 1A 
DUSP5                 0.011   dual specificity phosphatase 5 
PTPN14                0.010   protein tyrosine phosphatase, non-receptor type 14 [...
KIAA1211              0.010   hypothetical protein LOC57482 
TBC1D23               0.009   TBC1 domain family, member 23 
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 1 
NOLC1                 0.006   nucleolar and coiled-body phosphoprotein 1 
HSP90AB1              0.006   heat shock 90kDa protein 1, beta 
C9orf100              0.006   hypothetical protein LOC84904 
RQCD1                 0.006   RCD1 required for cell differentiation1 homolog [Homo...
DUSP4                 0.006   dual specificity phosphatase 4 isoform 1 
GOLGB1                0.006   golgi autoantigen, golgin subfamily b, macrogolgin ...
ICA1L                 0.006   islet cell autoantigen 1,69kDa-like isoform 1 
PHLDB2                0.005   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.005   pleckstrin homology-like domain, family B, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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