Search of human proteins with 6912382

Search of human proteins with 6912382

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912382 fractured callus expressed transcript 1 [Homo
sapiens]
         (103 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912382 fractured callus expressed transcript 1 [Homo sapiens]     209   3e-55
gi|6912714 translocase of inner mitochondrial membrane 9 homolog...    45   1e-05
gi|6912708 translocase of inner mitochondrial membrane 10 homolo...    37   0.003
gi|4758152 translocase of inner mitochondrial membrane 8 homolog...    33   0.037
gi|6912712 translocase of inner mitochondrial membrane 8 homolog...    33   0.037
gi|239757907 PREDICTED: similar to translocase of inner mitochon...    31   0.24 
gi|239752419 PREDICTED: similar to translocase of inner mitochon...    31   0.24 
gi|239746934 PREDICTED: similar to translocase of inner mitochon...    31   0.24 
gi|11024700 translocase of inner mitochondrial membrane 13 [Homo...    29   0.70 
gi|148612825 Rap GTPase interactor [Homo sapiens]                      28   1.2  
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    28   2.0  
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    28   2.0  
gi|239745503 PREDICTED: hypothetical protein XP_002343506 [Homo ...    28   2.0  
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        27   2.6  
gi|62865649 rififylin [Homo sapiens]                                   27   4.5  
gi|17432433 rififylin [Homo sapiens]                                   27   4.5  
gi|66346717 UCH interacting protein 1 isoform a [Homo sapiens]         26   5.9  
gi|197116396 hypothetical protein LOC284677 [Homo sapiens]             26   7.7  
gi|157785548 PAS domain containing 1 [Homo sapiens]                    26   7.7  

>gi|6912382 fractured callus expressed transcript 1 [Homo sapiens]
          Length = 103

 Score =  209 bits (533), Expect = 3e-55
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN 60
           MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN
Sbjct: 1   MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN 60

Query: 61  HRLMAAYVQLMPALVQRRIADYEAASAVPGVAAEQPGVSPSGS 103
           HRLMAAYVQLMPALVQRRIADYEAASAVPGVAAEQPGVSPSGS
Sbjct: 61  HRLMAAYVQLMPALVQRRIADYEAASAVPGVAAEQPGVSPSGS 103


>gi|6912714 translocase of inner mitochondrial membrane 9 homolog
          [Homo sapiens]
          Length = 89

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 20/63 (31%), Positives = 30/63 (47%)

Query: 1  MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN 60
          M  Q  +  Q++  ++FL  YN++TE CF  CV     R +  EE  C   C  K +   
Sbjct: 1  MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMT 60

Query: 61 HRL 63
           R+
Sbjct: 61 QRI 63


>gi|6912708 translocase of inner mitochondrial membrane 10 homolog
          [Homo sapiens]
          Length = 90

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 20 VYNRMTELCFQRCVPSLHHRA-LDAEEEACLHSCAGKLIHSNHRL 63
          +YNRMT  C ++CVP  +  A L   E  CL  C  K +  + R+
Sbjct: 21 MYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERM 65


>gi|4758152 translocase of inner mitochondrial membrane 8 homolog
          A isoform 1 [Homo sapiens]
          Length = 97

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 10/64 (15%)

Query: 1  MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSN 60
          +E Q+Q+ QQL          ++MTELC+++C+     + LD+  EAC  +C  + I ++
Sbjct: 25 VETQKQRFQQL---------VHQMTELCWEKCMDKPGPK-LDSRAEACFVNCVERFIDTS 74

Query: 61 HRLM 64
            ++
Sbjct: 75 QFIL 78


>gi|6912712 translocase of inner mitochondrial membrane 8 homolog
          B [Homo sapiens]
          Length = 83

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 8/68 (11%)

Query: 4  QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
          +QQ+ Q    +  F+       ELC+ +CV    +R LD+  E CL SC  + I +   +
Sbjct: 19 EQQKAQFTAQVHHFM-------ELCWDKCVEKPGNR-LDSRTENCLSSCVDRFIDTTLAI 70

Query: 64 MAAYVQLM 71
           + + Q++
Sbjct: 71 TSRFAQIV 78


>gi|239757907 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B (yeast) [Homo
           sapiens]
          Length = 136

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 4   QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
           +QQ+ Q    +  F+       ELC+ +CV    +R LD+  E CL SC    I +   +
Sbjct: 72  EQQKAQFTAQVHHFM-------ELCWDKCVEKPGNR-LDSCTENCLSSCVDHFIDTTLAI 123

Query: 64  MAAYVQLM 71
            + + Q++
Sbjct: 124 TSRFAQIV 131


>gi|239752419 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B [Homo sapiens]
          Length = 116

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 4   QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
           +QQ+ Q    +  F+       ELC+ +CV    +R LD+  E CL SC    I +   +
Sbjct: 52  EQQKAQFTAQVHHFM-------ELCWDKCVEKPGNR-LDSCTENCLSSCVDHFIDTTLAI 103

Query: 64  MAAYVQLM 71
            + + Q++
Sbjct: 104 TSRFAQIV 111


>gi|239746934 PREDICTED: similar to translocase of inner
           mitochondrial membrane 8 homolog B [Homo sapiens]
          Length = 116

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 4   QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
           +QQ+ Q    +  F+       ELC+ +CV    +R LD+  E CL SC    I +   +
Sbjct: 52  EQQKAQFTAQVHHFM-------ELCWDKCVEKPGNR-LDSCTENCLSSCVDHFIDTTLAI 103

Query: 64  MAAYVQLM 71
            + + Q++
Sbjct: 104 TSRFAQIV 111


>gi|11024700 translocase of inner mitochondrial membrane 13 [Homo
          sapiens]
          Length = 95

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 4  QQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
          Q + Q  + N ++ L    RMT+ CF++C+      +LD  E+ C+  C  + + + + +
Sbjct: 25 QVKVQIAVANAQELL---QRMTDKCFRKCI-GKPGGSLDNSEQKCIAMCMDRYMDAWNTV 80

Query: 64 MAAY 67
            AY
Sbjct: 81 SRAY 84


>gi|148612825 Rap GTPase interactor [Homo sapiens]
          Length = 1075

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 63  LMAAYVQLMPALVQRRIADYEAASAVPGVAAEQPGVSPS 101
           L AA+  L PA + R +  Y+ ASA+  ++  +PG   S
Sbjct: 719 LRAAFPALSPAQLHRLLTHYQLASAMGPMSTWEPGAQDS 757


>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
           isoform 2 [Homo sapiens]
          Length = 2472

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 39  RALDAEEE--ACLHSCAGKLIHSNHRLMAAYVQLMPALVQRRIADYEAA 85
           ++L A+EE    L   A KLI +NH  M        AL+ RR A +E A
Sbjct: 514 KSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERA 562


>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
           isoform 1 [Homo sapiens]
          Length = 2477

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 39  RALDAEEE--ACLHSCAGKLIHSNHRLMAAYVQLMPALVQRRIADYEAA 85
           ++L A+EE    L   A KLI +NH  M        AL+ RR A +E A
Sbjct: 514 KSLSAQEEKITALDEFATKLIQNNHYAMEDVATRRDALLSRRNALHERA 562


>gi|239745503 PREDICTED: hypothetical protein XP_002343506 [Homo
          sapiens]
          Length = 501

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 19 LVYNRMTE---LCFQRC--VPSLHHRALDAEEEACLHSCAGKLIHSNHRLMAAYVQLMPA 73
          L+ N + E   +C Q C  +P+L     D   + C+  C  +L+H   R+  A+ +L+ +
Sbjct: 33 LLANTLVEDVNICLQACSSLPALSSSLPDDLLQRCVDVCRVQLVHCGTRIRQAFGKLLKS 92

Query: 74 L 74
          +
Sbjct: 93 I 93


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 1   MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLH 50
           +++QQQQQQQ  +   FLL         FQR V S    AL    + C H
Sbjct: 596 LQQQQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPAL--PRQGCCH 643


>gi|62865649 rififylin [Homo sapiens]
          Length = 363

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 8/30 (26%), Positives = 23/30 (76%)

Query: 2   ERQQQQQQQLRNLRDFLLVYNRMTELCFQR 31
           +R++  + ++++LRD+L +++  TE+C ++
Sbjct: 97  QREELMKMKVKDLRDYLSLHDISTEMCREK 126


>gi|17432433 rififylin [Homo sapiens]
          Length = 363

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 8/30 (26%), Positives = 23/30 (76%)

Query: 2   ERQQQQQQQLRNLRDFLLVYNRMTELCFQR 31
           +R++  + ++++LRD+L +++  TE+C ++
Sbjct: 97  QREELMKMKVKDLRDYLSLHDISTEMCREK 126


>gi|66346717 UCH interacting protein 1 isoform a [Homo sapiens]
          Length = 368

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 17/79 (21%)

Query: 17  FLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRLMAAYVQLMPALVQ 76
           FL VY+     C QR  P LH                G +I + H+ + +Y QL+  ++ 
Sbjct: 282 FLQVYDDELGECCQRPGPDLHP--------------CGPIIQATHQNLTSYSQLLQVVM- 326

Query: 77  RRIADYEAASAVPGVAAEQ 95
             +AD  +A AV  V  +Q
Sbjct: 327 -AVAD-TSAKAVETVKKQQ 343


>gi|197116396 hypothetical protein LOC284677 [Homo sapiens]
          Length = 235

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 45  EEACLHSCA--GKLIHSNHRLMAAYVQ 69
           EE C HSCA  G   H  H+L  +Y+Q
Sbjct: 117 EEPCAHSCAHPGLPPHLVHKLPLSYLQ 143


>gi|157785548 PAS domain containing 1 [Homo sapiens]
          Length = 773

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 2   ERQQQQQQQLRNLRDFLLVYNRMTELCFQR----CVPSLHH 38
           E QQ+QQ Q + L+  ++V N   ++C Q      VP  +H
Sbjct: 560 EEQQKQQLQEQPLKHNVIVGNERVQICLQNPRDVSVPLCNH 600


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,061,946
Number of Sequences: 37866
Number of extensions: 158660
Number of successful extensions: 759
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 20
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.