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Search of human proteins with 68509270
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68509270 transcriptional adaptor 2-like isoform a [Homo
sapiens]
(443 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|68509270 transcriptional adaptor 2-like isoform a [Homo sapiens] 912 0.0
gi|68509268 transcriptional adaptor 2-like isoform b [Homo sapiens] 581 e-166
gi|156523268 transcriptional adaptor 2 (ADA2 homolog, yeast)-bet... 159 5e-39
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 40 0.004
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 40 0.004
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 40 0.004
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 39 0.012
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ... 35 0.14
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.14
gi|194578923 sperm associated antigen 9 isoform 1 [Homo sapiens] 33 0.40
gi|27436920 sperm associated antigen 9 isoform 3 [Homo sapiens] 33 0.40
gi|148746195 trichohyalin [Homo sapiens] 32 0.89
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens] 32 1.2
gi|31377705 centrosomal protein 97kDa [Homo sapiens] 32 1.2
gi|7661952 squamous cell carcinoma antigen recognized by T cells... 30 3.4
gi|22749049 Leber congenital amaurosis 5-like [Homo sapiens] 30 3.4
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 30 4.4
gi|170932518 paxillin isoform 3 [Homo sapiens] 30 4.4
gi|170932516 paxillin isoform 2 [Homo sapiens] 30 4.4
gi|170932514 paxillin isoform 1 [Homo sapiens] 30 4.4
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 30 4.4
gi|8923396 HAUS augmin-like complex, subunit 4 [Homo sapiens] 30 5.7
gi|63176661 zinc finger protein 29 isoform 1 [Homo sapiens] 30 5.7
gi|166295204 hypothetical protein LOC80127 [Homo sapiens] 30 5.7
>gi|68509270 transcriptional adaptor 2-like isoform a [Homo sapiens]
Length = 443
Score = 912 bits (2358), Expect = 0.0
Identities = 443/443 (100%), Positives = 443/443 (100%)
Query: 1 MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT 60
MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
Sbjct: 1 MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT 60
Query: 61 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN 120
YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
Sbjct: 61 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN 120
Query: 121 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD 180
NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
Sbjct: 121 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD 180
Query: 181 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME 240
NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
Sbjct: 181 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME 240
Query: 241 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA 300
RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
Sbjct: 241 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA 300
Query: 301 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR 360
RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
Sbjct: 301 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR 360
Query: 361 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI 420
SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
Sbjct: 361 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI 420
Query: 421 KIDVNKTRKIYDFLIREGYITKG 443
KIDVNKTRKIYDFLIREGYITKG
Sbjct: 421 KIDVNKTRKIYDFLIREGYITKG 443
>gi|68509268 transcriptional adaptor 2-like isoform b [Homo sapiens]
Length = 305
Score = 581 bits (1497), Expect = e-166
Identities = 276/282 (97%), Positives = 277/282 (98%)
Query: 1 MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT 60
MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
Sbjct: 1 MDRLGPFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT 60
Query: 61 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN 120
YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
Sbjct: 61 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN 120
Query: 121 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD 180
NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
Sbjct: 121 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD 180
Query: 181 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME 240
NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
Sbjct: 181 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME 240
Query: 241 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRRE 282
RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHA + L E
Sbjct: 241 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHACRWFLSLE 282
>gi|156523268 transcriptional adaptor 2 (ADA2 homolog, yeast)-beta
[Homo sapiens]
Length = 420
Score = 159 bits (402), Expect = 5e-39
Identities = 121/445 (27%), Positives = 204/445 (45%), Gaps = 49/445 (11%)
Query: 14 KPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIM-----TSDF 68
K C C + + +C EC LC +CF+ G E H+ H Y+++ T
Sbjct: 6 KKYCVYCLAEVSPLRFRCTEC--QDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWG 63
Query: 69 PVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQM-CTKTKEECEKHYMKHFINNPLFAST 127
P + WT++EE LL+A+ GFGNW+D+A + ++T +E +HY+ +I+ L +
Sbjct: 64 PEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKAC 123
Query: 128 LLN-LKQAEEAKTADTAIPFHSTDDPPRPTFD-SLLSRDMAGYMPARADFIEEFDNYAEW 185
+ + + T + P + P P D S+ + GYMP R D+ E+D AE
Sbjct: 124 IPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAET 183
Query: 186 DLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLI-------NLRKFQL 238
+ + DD D+ LK A VD+Y +LKERQRRK I RD+ L+ K +
Sbjct: 184 LISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKA 243
Query: 239 MERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFC 298
++R+ KE ++L +R + + E D E+ E LR +I+ LQ YR GIT
Sbjct: 244 LKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKME 303
Query: 299 SARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSG 358
+ Y+ + RE+ + + + + + G N
Sbjct: 304 ESAEYEAARHKREKRKENKNLAGS-----------------KRGKEDGKDSEFAAIEN-- 344
Query: 359 RRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNE-CNKQGGLRLAQAR 417
LPG E L+++EK LC + L P Y+ K+ ++ + K+ G+ +++R
Sbjct: 345 -----------LPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIP-SKSR 392
Query: 418 ALIKIDVNKTRKIYDFLIREGYITK 442
+D ++I +FL G+I++
Sbjct: 393 LPSYLDKVLKKRILNFLTESGWISR 417
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQA 134
WT QE + LLEA ++ +W V+ + ++T++EC H+++ I +P L +A
Sbjct: 632 WTEQETLLLLEA-LEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDP-----YLEDSEA 685
Query: 135 EEAKTADTAIPFHSTDDPPRPTFDSLLS-RDMAGYMPARADFIEEFDNYAE 184
A IPF + +P T L S D A +EEF E
Sbjct: 686 SLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 736
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQA 134
WT QE + LLEA ++ +W V+ + ++T++EC H+++ I +P L +A
Sbjct: 601 WTEQETLLLLEA-LEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDP-----YLEDSEA 654
Query: 135 EEAKTADTAIPFHSTDDPPRPTFDSLLS-RDMAGYMPARADFIEEFDNYAE 184
A IPF + +P T L S D A +EEF E
Sbjct: 655 SLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 705
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 40.0 bits (92), Expect = 0.004
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQA 134
WT QE + LLEA ++ +W V+ + ++T++EC H+++ I +P L +A
Sbjct: 632 WTEQETLLLLEA-LEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDP-----YLEDSEA 685
Query: 135 EEAKTADTAIPFHSTDDPPRPTFDSLLS-RDMAGYMPARADFIEEFDNYAE 184
A IPF + +P T L S D A +EEF E
Sbjct: 686 SLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKE 736
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 38.5 bits (88), Expect = 0.012
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQA 134
WT QE + LLEA ++ +W V+ + ++T++EC H+++ I +P L A
Sbjct: 623 WTEQETLLLLEA-LEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDP-----YLENSDA 676
Query: 135 EEAKTADTAIPFHSTDDPPRPTFDSLLS 162
A +PF + +P T L S
Sbjct: 677 SLGPLAYQPVPFSQSGNPVMSTVAFLAS 704
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
[Homo sapiens]
Length = 745
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
[Homo sapiens]
Length = 555
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
[Homo sapiens]
Length = 758
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
[Homo sapiens]
Length = 640
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
[Homo sapiens]
Length = 761
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
[Homo sapiens]
Length = 637
Score = 35.0 bits (79), Expect = 0.14
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 52 YKKHQSDHTYEIMTSDFPVLDPS----------WTAQEEMALLEAVMDCGFGNWQDVANQ 101
Y + D +E+ D+ L P WT +E+ L + V G +W+ +AN
Sbjct: 10 YSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANY 69
Query: 102 MCTKTKEECEKHYMK 116
+ +T +C+ + K
Sbjct: 70 LPNRTDVQCQHRWQK 84
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 56 QSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYM 115
Q H ++ + + + P WT +E+ ++E V G W +A + + ++C + +
Sbjct: 77 QCQHRWQKVLNPELIKGP-WTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135
Query: 116 KH 117
H
Sbjct: 136 NH 137
>gi|194578923 sperm associated antigen 9 isoform 1 [Homo sapiens]
Length = 1321
Score = 33.5 bits (75), Expect = 0.40
Identities = 46/220 (20%), Positives = 82/220 (37%), Gaps = 42/220 (19%)
Query: 189 DIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQ 248
D F +D H +++ ++ + +L + R+K +R H +F+ + + K++Q
Sbjct: 62 DSVFAQDQE---HQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQ 118
Query: 249 ---DLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDH 305
+ E+ R + D+ E EL++E L + T I N+
Sbjct: 119 TRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYM------- 171
Query: 306 LKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSP-------SIPMASNSG 358
E L+RT L ++ Q S +R++ I G+ P P A G
Sbjct: 172 -------EHLERTKLHQLSGSDQLESTAHSRIRKERPISLGIFPLPAGDGLLTPDAQKGG 224
Query: 359 R---------------RSAPPLNLTGLPGTEKLNEKEKEL 383
RS L ++ P +K E+E EL
Sbjct: 225 ETPGSEQWKFQELSQPRSHTSLKVSNSPEPQKAVEQEDEL 264
>gi|27436920 sperm associated antigen 9 isoform 3 [Homo sapiens]
Length = 1307
Score = 33.5 bits (75), Expect = 0.40
Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 189 DIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQ 248
D F +D H +++ ++ + +L + R+K +R H +F+ + + K++Q
Sbjct: 62 DSVFAQDQE---HQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQ 118
Query: 249 ---DLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDH 305
+ E+ R + D+ E EL++E L + T I N+
Sbjct: 119 TRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYM------- 171
Query: 306 LKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPL 365
E L+RT L ++ Q S +R++ I G+ P+ + G +
Sbjct: 172 -------EHLERTKLHQLSGSDQLESTAHSRIRKERPISLGI---FPLPAGDGLLTPDAQ 221
Query: 366 NLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDV 424
PG+E+ K +EL Q P ++ K L + QGG + + DV
Sbjct: 222 KGGETPGSEQW--KFQELSQ-----PRSHTSLKDELSDV--SQGGSKATTPASTANSDV 271
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.3 bits (72), Expect = 0.89
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 212 HSRLKERQRRKKIIRDHGLINLRKFQLMERRYPK--EVQDLYETMRRFARIVGPVEHDKF 269
H + E++RR++ L++ Q R + K E + +E RR ++ E ++
Sbjct: 434 HEQKHEQERREQ--------RLKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERR 485
Query: 270 IESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQD 329
LE E RRE QE R + R LK+ EEERL++ + SE +
Sbjct: 486 ERWLKLEEEERRE---QQERREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQ 542
Query: 330 SSACQQWLRRQAD 342
+Q L+R+ +
Sbjct: 543 EERREQLLKREEE 555
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 214 RLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESH 273
R +E +R +++ R L++ E++ +E ++ E + + E +K +E
Sbjct: 509 REQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKR-------EEEKRLEQE 561
Query: 274 ALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSAC 333
E L+RE QE R + R LK+ +EERL++ + E ++ ++
Sbjct: 562 RREQRLKRE----QEERRDQLLKREEERRQQRLKR-EQEERLEQRLKREEVERLEQEERR 616
Query: 334 QQWLRRQ 340
+Q L+R+
Sbjct: 617 EQRLKRE 623
>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
Length = 2419
Score = 32.0 bits (71), Expect = 1.2
Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 31/230 (13%)
Query: 125 ASTLLNLK-QAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYA 183
A TLL +K QA + +A + H LL R+M AR D +++ + A
Sbjct: 1626 AETLLAMKDQARDLASAGNLLKKHQ-----------LLEREML----AREDALKDLNTLA 1670
Query: 184 EWDLR----DIDFVEDDSDILHALKMAVVDI---YHSRLKERQRRKKIIRD----HGLIN 232
E L ++D + D ++ + V ++ +H +LKE + +D I
Sbjct: 1671 EDLLSSGTFNVDQIVKKKDNVNKRFLNVQELAAAHHEKLKEAYALFQFFQDLDDEESWIE 1730
Query: 233 LRKFQLMERRYPKEVQDLYETMRRFARIVGP-VEHDKFIESHA-LEFELRREIKRLQEYR 290
+ ++ + Y +++Q + +++ R+ G V H+ I++ + +L+ + QE
Sbjct: 1731 EKLIRVSSQDYGRDLQGVQNLLKKHKRLEGELVAHEPAIQNVLDMAEKLKDKAAVGQEEI 1790
Query: 291 TAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQ 340
+ F ++ LK+ + LK E LQ++Q++ + W+ +
Sbjct: 1791 QLRLAQF--VEHWEKLKELAKARGLKLEESLEYLQFMQNAEEEEAWINEK 1838
>gi|31377705 centrosomal protein 97kDa [Homo sapiens]
Length = 865
Score = 32.0 bits (71), Expect = 1.2
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 275 LEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDS-SAC 333
+ +E+R ++R+QE+ C L+K R+EER+K+ + E +++ + +
Sbjct: 584 VRYEIR--LRRMQEHIV------CLTDEIRRLRKERDEERIKKFVQEEAFRFLWNQVRSL 635
Query: 334 QQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKE 382
Q W Q +D LS S PP++ T +P L + +E
Sbjct: 636 QVW---QQTVDQRLS--------SWHTDVPPISSTLVPSKHPLFTQSQE 673
>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
[Homo sapiens]
Length = 963
Score = 30.4 bits (67), Expect = 3.4
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 156 TFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRL 215
TF+ L+ AG++ A D++E + Y ++ R +DF +D S L L+ A
Sbjct: 402 TFEKALN---AGFIQA-TDYVEIWQAYLDYLRRRVDFKQDSSKELEELRAAFTRALEYLK 457
Query: 216 KERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYE 252
+E + R D + ++ + +E R +Q E
Sbjct: 458 QEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARE 494
>gi|22749049 Leber congenital amaurosis 5-like [Homo sapiens]
Length = 670
Score = 30.4 bits (67), Expect = 3.4
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 34/190 (17%)
Query: 198 DILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRF 257
DIL AL+ D + +E + II N +K Q +E++ L R F
Sbjct: 240 DILQALQKLSEDKNLAEREELTHKLSIITTKMDANDKKIQSLEKQ-------LRLNCRAF 292
Query: 258 ARIVGPVEHDKFIESHALEFELRREIKRLQEY-----RTAGITNFCSARTYDHLKKTREE 312
+R + +E K + + L+ E+K LQ+ R I N S R +L T +
Sbjct: 293 SRQLA-IETRKTLAAQTATKTLQVEVKHLQQKLKEKDRELEIKNIYSHRILKNLHDTEDY 351
Query: 313 ERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRS-APPLNLTGLP 371
++ T + D + P M ++S PPL G
Sbjct: 352 PKVSST--------------------KSVQADRKILPFTSMRHQGTQKSDVPPLTTKGKK 391
Query: 372 GTEKLNEKEK 381
T ++ KEK
Sbjct: 392 ATGNIDHKEK 401
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 30.0 bits (66), Expect = 4.4
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 69 PVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTL 128
PV WT +E + +++ G NW +A + TK++ +C K+F N L
Sbjct: 622 PVETSRWTEEEMEVAKKGLVEHG-RNWAAIAKMVGTKSEAQC-----KNFYFNYKRRHNL 675
Query: 129 LNLKQAEEAKTA 140
NL Q + KT+
Sbjct: 676 DNLLQQHKQKTS 687
>gi|170932518 paxillin isoform 3 [Homo sapiens]
Length = 424
Score = 30.0 bits (66), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 15 PPCRGCSSYLMEPYIKCAE-CGPPPFFLCLQCFT 47
P C GC+ ++E YI P F+C +CFT
Sbjct: 307 PKCGGCARAILENYISALNTLWHPECFVCRECFT 340
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 30.0 bits (66), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 15 PPCRGCSSYLMEPYIKCAE-CGPPPFFLCLQCFT 47
P C GC+ ++E YI P F+C +CFT
Sbjct: 440 PKCGGCARAILENYISALNTLWHPECFVCRECFT 473
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 30.0 bits (66), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 15 PPCRGCSSYLMEPYIKCAE-CGPPPFFLCLQCFT 47
P C GC+ ++E YI P F+C +CFT
Sbjct: 474 PKCGGCARAILENYISALNTLWHPECFVCRECFT 507
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 30.0 bits (66), Expect = 4.4
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEEC 110
W +EE L+E + G G+W +A+++ ++ +C
Sbjct: 456 WNLKEEEQLIELIEKYGVGHWAKIASELPHRSGSQC 491
Score = 29.3 bits (64), Expect = 7.5
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 71 LDPS-----WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK--HF 118
LDP W +E+ LL+AV G +W + ++ ++ +C Y++ HF
Sbjct: 395 LDPGLKKGYWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHF 449
>gi|8923396 HAUS augmin-like complex, subunit 4 [Homo sapiens]
Length = 363
Score = 29.6 bits (65), Expect = 5.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 90 CGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQ 133
C G ++ Q+C+K C + + NP F+ LLNL Q
Sbjct: 7 CSPGEGMEILQQVCSKQLPPCNLS-KEDLLQNPYFSKLLLNLSQ 49
>gi|63176661 zinc finger protein 29 isoform 1 [Homo sapiens]
Length = 614
Score = 29.6 bits (65), Expect = 5.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 8/37 (21%)
Query: 26 EPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYE 62
E Y KC ECG + F+ G + +HQ+ HT E
Sbjct: 247 EKYYKCDECG--------KSFSDGSNFSRHQTTHTGE 275
>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
Length = 529
Score = 29.6 bits (65), Expect = 5.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 219 QRRKKIIRDHGLIN-LRKFQLMERRYPKEVQDLYETMRRFARI----VGPVEHDKFIESH 273
Q+ K+I H + +R+FQ + + +E+ DL E +R RI + +E F E H
Sbjct: 134 QKAKEIGMIHTELKAVRQFQKRKIQVERELDDLKENLRNTERIHQETLRRLESRFFEEKH 193
Query: 274 ALEFELRREIKRLQE 288
LE E ++I L E
Sbjct: 194 RLEQEAEKKIIMLAE 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,185,966
Number of Sequences: 37866
Number of extensions: 837337
Number of successful extensions: 2463
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2415
Number of HSP's gapped (non-prelim): 67
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.