Search of human proteins with 63054819

Search of human proteins with 63054819

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|63054819 hypothetical protein LOC195827 [Homo sapiens]
         (226 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|63054819 hypothetical protein LOC195827 [Homo sapiens]             457   e-129
gi|22748799 hypothetical protein LOC127281 [Homo sapiens]              63   2e-10
gi|148596959 hypothetical protein LOC84293 [Homo sapiens]              36   0.031
gi|69885084 p120E4F [Homo sapiens]                                     33   0.26 
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]            31   0.75 
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho...    30   2.2  
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             30   2.2  
gi|46397390 pogo transposable element with ZNF domain isoform 1 ...    29   3.7  
gi|46397394 pogo transposable element with ZNF domain isoform 2 ...    29   3.7  
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur...    29   3.7  
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]                    29   3.7  
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               28   4.9  
gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo ...    28   6.4  
gi|48255913 tripartite motif-containing 16 [Homo sapiens]              28   6.4  
gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo ...    28   6.4  
gi|20070376 solute carrier family 38, member 10 isoform b [Homo ...    28   6.4  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    28   8.3  
gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]     28   8.3  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    28   8.3  

>gi|63054819 hypothetical protein LOC195827 [Homo sapiens]
          Length = 226

 Score =  457 bits (1177), Expect = e-129
 Identities = 226/226 (100%), Positives = 226/226 (100%)

Query: 1   MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERRAVV 60
           MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERRAVV
Sbjct: 1   MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERRAVV 60

Query: 61  VFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120
           VFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD
Sbjct: 61  VFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120

Query: 121 PEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAVTGPLFDFQGDPAQQGGTL 180
           PEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAVTGPLFDFQGDPAQQGGTL
Sbjct: 121 PEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAVTGPLFDFQGDPAQQGGTL 180

Query: 181 ILGPGNNIHFIHRDRNRLDHKPINSVLQLVGVQHVNFTNRPSVIHV 226
           ILGPGNNIHFIHRDRNRLDHKPINSVLQLVGVQHVNFTNRPSVIHV
Sbjct: 181 ILGPGNNIHFIHRDRNRLDHKPINSVLQLVGVQHVNFTNRPSVIHV 226


>gi|22748799 hypothetical protein LOC127281 [Homo sapiens]
          Length = 198

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 24/178 (13%)

Query: 44  GQRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHH 103
           G+ V   +L+RE   VV  +R F C +C+   +DL+ +    L +  V L+ +G  +   
Sbjct: 20  GEAVELRSLWREHACVVAGLRRFGCVVCRWIAQDLSSL-AGLLDQHGVRLVGVGPEAL-G 77

Query: 104 IEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAV- 162
           ++ F     ++ E+Y+D  +++YK LG KR   +           ++L  +L    R V 
Sbjct: 78  LQEFLDGDYFAGELYLDESKQLYKELGFKRYNSL-----------SILPAALGKPVRDVA 126

Query: 163 -----TGPLFDFQGDPAQQGGTLILGPGNN---IHFIHRDRNRLDHKPINSVLQLVGV 212
                 G   +  GD  Q GG L++  G +   +HF+ +     D+ P   +LQ++G+
Sbjct: 127 AKAKAVGIQGNLSGDLLQSGGLLVVSKGGDKVLLHFVQKSPG--DYVPKEHILQVLGI 182


>gi|148596959 hypothetical protein LOC84293 [Homo sapiens]
          Length = 229

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 26/207 (12%)

Query: 13  GAAALVPAPSGPDS--GQPLAAAVA-----ELPVLDARGQRVPFGALFRERRAVVVFVRH 65
           GAAAL    +  D    +P  AA+      +L  L+   +      L+ +  AV++ VR 
Sbjct: 23  GAAALALLLANTDVFLSKPQKAALEYLEDIDLKTLEKEPRTFKAKELWEKNGAVIMAVRR 82

Query: 66  FLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCK--LTGYSHEIYVDPER 123
             C++C+E   DL+ + +S L +  V L  + +    HI    K     +  EI++D ++
Sbjct: 83  PGCFLCREEAADLSSL-KSMLDQLGVPLYAVVK---EHIRTEVKDFQPYFKGEIFLDEKK 138

Query: 124 EIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQSLWRAVTGPLF-DFQGDPAQQGGTLIL 182
           + Y   G +R + +            +  G   + +RA  G    + +G+    GG  ++
Sbjct: 139 KFY---GPQRRKMM--------FMGFIRLGVWYNFFRAWNGGFSGNLEGEGFILGGVFVV 187

Query: 183 GPG-NNIHFIHRDRNRLDHKPINSVLQ 208
           G G   I   HR++   D   + SVL+
Sbjct: 188 GSGKQGILLEHREKEFGDKVNLLSVLE 214


>gi|69885084 p120E4F [Homo sapiens]
          Length = 784

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 9   RQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDAR 43
           R      AL PAP+   S QPLA A  +LPVL+ +
Sbjct: 384 RAAGEEGALEPAPAAGSSPQPLAVAAPQLPVLEVQ 418


>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 348

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 1   MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVP 48
           MA P P  R+ +  A+L P P  P +  P AAA A       +  R+P
Sbjct: 206 MAGPFPCARRATCLASLSPPPKLPTAPGPRAAAAAATATSSIQYPRIP 253


>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
           sapiens]
          Length = 1288

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 137 IASSGQSPHIK---SNLLSGSLQSLWRAVTGPLFDFQGDPAQQGGTLILGPG--NNIHFI 191
           + S+ Q  ++K     +  GSL SL R+V GPL D +   +     ++ G G  ++ H +
Sbjct: 709 LGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLGYLHDNHIV 768

Query: 192 HRD 194
           HRD
Sbjct: 769 HRD 771


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 2   AAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERR 57
           ++P+P  R  + AAA  P   G +S  P +A     P    RG R   GA  R RR
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSA-----PSSQGRGGRAAGGAGRRRRR 389


>gi|46397390 pogo transposable element with ZNF domain isoform 1
           [Homo sapiens]
          Length = 1410

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 3   APAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVP-FGALFRERRAVVV 61
           +P PV    + +A      SGP+S   + +++    + D   +  P   A FR   A+  
Sbjct: 333 SPGPVVVSNNSSAHGSQRTSGPESSMKVTSSIPVFDLQDGGRKICPRCNAQFRVTEAL-- 390

Query: 62  FVRHFLCYICKEYVE 76
             R  +CY C E VE
Sbjct: 391 --RGHMCYCCPEMVE 403


>gi|46397394 pogo transposable element with ZNF domain isoform 2
           [Homo sapiens]
          Length = 1357

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 3   APAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVP-FGALFRERRAVVV 61
           +P PV    + +A      SGP+S   + +++    + D   +  P   A FR   A+  
Sbjct: 280 SPGPVVVSNNSSAHGSQRTSGPESSMKVTSSIPVFDLQDGGRKICPRCNAQFRVTEAL-- 337

Query: 62  FVRHFLCYICKEYVE 76
             R  +CY C E VE
Sbjct: 338 --RGHMCYCCPEMVE 350


>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
           plakophilin-related arm-repeat protein) [Homo sapiens]
          Length = 1225

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 2   AAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERR 57
           A PA     +  +++ +PAP  P  G PLAA     P    RG   P GA +   R
Sbjct: 243 APPAAAAAALYYSSSTLPAP--PRGGSPLAAPQGGSPTKLQRGGSAPEGATYAAPR 296


>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
          Length = 1858

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 3    APAPVTR---QVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRV 47
            +P   TR   + +G++A  PAP  P S +PL++ + EL  L   G+ V
Sbjct: 1638 SPVKATRADARKAGSSASPPAPYSPPSSRPLSSPLDELASLFNSGRSV 1685


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 2   AAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLD 41
           +APA    Q  G    +PA  GP   +PL  ++ E   LD
Sbjct: 536 SAPATSEGQDKGCRGTLPAQEGPSGSKPLRGSLKEEVALD 575


>gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo
          sapiens]
          Length = 282

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 1  MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPV 39
          + AP P+ R    A A  PAP  PDSG P   + +  PV
Sbjct: 6  LMAPGPLPR----ATAQPPAPLSPDSGSPSPDSGSASPV 40


>gi|48255913 tripartite motif-containing 16 [Homo sapiens]
          Length = 564

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 1  MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPV 39
          + AP P+ R    A A  PAP  PDSG P   + +  PV
Sbjct: 6  LMAPGPLPR----ATAQPPAPLSPDSGSPSPDSGSASPV 40


>gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo
           sapiens]
          Length = 918

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 2   AAPAPVTRQV---SGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQR 46
           A P P  R +    GA+ L P  +GP   +PLAA   + P  + R QR
Sbjct: 864 ANPVPGRRSLPRPGGASPLRPPGAGPQQSRPLAALAPKFP--EYRSQR 909


>gi|20070376 solute carrier family 38, member 10 isoform b [Homo
           sapiens]
          Length = 780

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 14  AAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPF 49
           A+AL P  SGP SG PL     +  V+     R PF
Sbjct: 691 ASALQPPASGPGSGSPLPQPWGDAQVILGSPARPPF 726


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 6/43 (13%)

Query: 2   AAPAPVTRQVSGAAALVPAPS----GPD--SGQPLAAAVAELP 38
           A P P   Q  G+A   PAP+    GP   SGQP   A A  P
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP 338


>gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]
          Length = 593

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 112 GYSHEIYVDPEREIYKRLGMKRGEEIASSG-QSPHIKSNLLSGSLQSLWRAVTGPLFDFQ 170
           GY +   + P R+ + + G  RG    ++G ++P  + + L G   S  R +     + +
Sbjct: 358 GYPYNALIGPNRDYFVKAGSIRGRGRGAAGNRAPGPRGSYLGG--YSAGRGIYSRYHEGK 415

Query: 171 GDPAQQGGTLILGPGNNIHFIHRDRNRLDHKPINSVLQLVGVQHVNFTNRPS 222
           G   ++G  L+  P   I  +    N +  KP    +  +G Q+  F   P+
Sbjct: 416 GKQQEKGYELV--PNLEIPTV----NPVAIKPGTVAIPAIGAQYSMFPAAPA 461


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 11  VSGAAALVPAPSGPDSGQPLAAA 33
           V G A    AP+G  SGQPLA A
Sbjct: 306 VFGGAGAASAPTGTPSGQPLAVA 328


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,402,626
Number of Sequences: 37866
Number of extensions: 450342
Number of successful extensions: 1350
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1333
Number of HSP's gapped (non-prelim): 26
length of query: 226
length of database: 18,247,518
effective HSP length: 99
effective length of query: 127
effective length of database: 14,498,784
effective search space: 1841345568
effective search space used: 1841345568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.