Search of human proteins with 13489093

Search of human proteins with 13489093

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13489093 elongation of very long chain fatty acids-like 1
[Homo sapiens]
         (279 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13489093 elongation of very long chain fatty acids-like 1 [Ho...   584   e-167
gi|157388949 elongation of very long chain fatty acids-like 7 [H...   358   2e-99
gi|157388947 elongation of very long chain fatty acids-like 7 [H...   358   2e-99
gi|12232379 elongation of very long chain fatty acids-like 4 [Ho...   215   4e-56
gi|11464975 elongation of very long chain fatty acids-like 5 [Ho...   181   5e-46
gi|157388945 elongation of very long chain fatty acids-like 2 [H...   169   2e-42
gi|23097310 elongation of very long chain fatty acids like 3 [Ho...    84   1e-16
gi|195539343 elongation of very long chain fatty acids-like 6 [H...    73   2e-13
gi|13129088 elongation of very long chain fatty acids-like 6 [Ho...    73   2e-13
gi|239749085 PREDICTED: hypothetical protein XP_002346899, parti...    30   3.1  
gi|239743111 PREDICTED: hypothetical protein XP_002342756, parti...    30   3.1  
gi|239747244 PREDICTED: hypothetical protein [Homo sapiens]            28   6.8  
gi|239741065 PREDICTED: hypothetical protein [Homo sapiens]            28   6.8  
gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]          28   6.8  
gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]          28   6.8  

>gi|13489093 elongation of very long chain fatty acids-like 1 [Homo
           sapiens]
          Length = 279

 Score =  584 bits (1506), Expect = e-167
 Identities = 279/279 (100%), Positives = 279/279 (100%)

Query: 1   MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG 60
           MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG
Sbjct: 1   MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG 60

Query: 61  FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI 120
           FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI
Sbjct: 61  FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI 120

Query: 121 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL 180
           ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL
Sbjct: 121 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL 180

Query: 181 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG 240
           YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG
Sbjct: 181 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG 240

Query: 241 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 279
           TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN
Sbjct: 241 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 279


>gi|157388949 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score =  358 bits (920), Expect = 2e-99
 Identities = 159/275 (57%), Positives = 212/275 (77%), Gaps = 4/275 (1%)

Query: 5   VNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIV 64
           V+LY   +K ADPR++ + LM SPL  T +L  YVYFV SLGP++M NRKPF+L+  MI 
Sbjct: 11  VHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMIT 70

Query: 65  YNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMD 124
           YNF +V  S+Y+ YEF+MSGW   Y++RCD VDYS SP ALRM R  WL+ FSKFIEL+D
Sbjct: 71  YNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLYYFSKFIELLD 130

Query: 125 TVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGL 184
           T+ F+LRKK+ QVTFLHVFHH+++PW+WW+GVK A GG+G+FHA++N++VHV+MY YYGL
Sbjct: 131 TIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGL 190

Query: 185 SAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFF 244
           SA GP  Q YLWWKK++T++QL+QFV+V++HISQ++FM  C YQ+PV   +I  Y  +F 
Sbjct: 191 SALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFACIIMSYSFMFL 250

Query: 245 MLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 279
           +LF +FWY +YTKG+RLP+ ++     G  K K N
Sbjct: 251 LLFLHFWYRAYTKGQRLPKTVKN----GTCKNKDN 281


>gi|157388947 elongation of very long chain fatty acids-like 7 [Homo
           sapiens]
          Length = 281

 Score =  358 bits (920), Expect = 2e-99
 Identities = 159/275 (57%), Positives = 212/275 (77%), Gaps = 4/275 (1%)

Query: 5   VNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIV 64
           V+LY   +K ADPR++ + LM SPL  T +L  YVYFV SLGP++M NRKPF+L+  MI 
Sbjct: 11  VHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRKPFELKKAMIT 70

Query: 65  YNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMD 124
           YNF +V  S+Y+ YEF+MSGW   Y++RCD VDYS SP ALRM R  WL+ FSKFIEL+D
Sbjct: 71  YNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLYYFSKFIELLD 130

Query: 125 TVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGL 184
           T+ F+LRKK+ QVTFLHVFHH+++PW+WW+GVK A GG+G+FHA++N++VHV+MY YYGL
Sbjct: 131 TIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGL 190

Query: 185 SAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFF 244
           SA GP  Q YLWWKK++T++QL+QFV+V++HISQ++FM  C YQ+PV   +I  Y  +F 
Sbjct: 191 SALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFACIIMSYSFMFL 250

Query: 245 MLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 279
           +LF +FWY +YTKG+RLP+ ++     G  K K N
Sbjct: 251 LLFLHFWYRAYTKGQRLPKTVKN----GTCKNKDN 281


>gi|12232379 elongation of very long chain fatty acids-like 4 [Homo
           sapiens]
          Length = 314

 Score =  215 bits (547), Expect = 4e-56
 Identities = 117/276 (42%), Positives = 167/276 (60%), Gaps = 10/276 (3%)

Query: 5   VNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIV 64
           V  Y+     AD R++ +PLM SP    SI   Y+ FV  LGP+ M +R+PFQ+R  +I+
Sbjct: 23  VEFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLII 81

Query: 65  YNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMD 124
           YNF +V L+L+I  E  M  + + Y++ C  VDYSN+   +R+    W +  SK +E +D
Sbjct: 82  YNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLD 141

Query: 125 TVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGL 184
           TV FILRKK+ QV+FLHV+HH  +   WW G+K   GG   F A +NS +HVIMY YYGL
Sbjct: 142 TVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGL 201

Query: 185 SAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH-LIWMYGTIF 243
           +AFGP  Q YLWWK+++T +QLIQF +   H +   + + C   +P  +H  +  Y   F
Sbjct: 202 TAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSLY-TDC--PFPKWMHWALIAYAISF 258

Query: 244 FMLFSNFWYHSYTKGKRLPRA--LQQNG--APGIAK 275
             LF NF+  +Y + K+ P+A     NG  A G++K
Sbjct: 259 IFLFLNFYIRTYKEPKK-PKAGKTAMNGISANGVSK 293


>gi|11464975 elongation of very long chain fatty acids-like 5 [Homo
           sapiens]
          Length = 299

 Score =  181 bits (460), Expect = 5e-46
 Identities = 96/255 (37%), Positives = 146/255 (57%), Gaps = 15/255 (5%)

Query: 8   YQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNF 67
           ++ ++   D R++G+ L+ +  + T I       ++ LGP+ M N++PF  RG ++VYN 
Sbjct: 12  FKALLGPRDTRVKGWFLLDN-YIPTFICSVIYLLIVWLGPKYMRNKQPFSCRGILVVYNL 70

Query: 68  SLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVI 127
            L  LSLY+  E +   W   Y + C     +   + ++++RV W + FSK IE MDT  
Sbjct: 71  GLTLLSLYMFCELVTGVWEGKYNFFCQGTRTAGESD-MKIIRVLWWYYFSKLIEFMDTFF 129

Query: 128 FILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAF 187
           FILRK + Q+T LHV+HH+ +   WW+ +   P G   F A +NS +HV+MY YYGLS+ 
Sbjct: 130 FILRKNNHQITVLHVYHHASMLNIWWFVMNWVPCGHSYFGATLNSFIHVLMYSYYGLSSV 189

Query: 188 GPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFM-- 245
            P  +PYLWWKK++T  QL+QFVL  +        +SC   +P    L W+Y  I +M  
Sbjct: 190 -PSMRPYLWWKKYITQGQLLQFVLTII-------QTSCGVIWPCTFPLGWLYFQIGYMIS 241

Query: 246 ---LFSNFWYHSYTK 257
              LF+NF+  +Y K
Sbjct: 242 LIALFTNFYIQTYNK 256


>gi|157388945 elongation of very long chain fatty acids-like 2 [Homo
           sapiens]
          Length = 296

 Score =  169 bits (429), Expect = 2e-42
 Identities = 93/254 (36%), Positives = 146/254 (57%), Gaps = 10/254 (3%)

Query: 16  DPRIQGYPLMGSPLLMTSILLTYVYFV-LSLGPRIMANRKPFQLRGFMIVYNFSLVALSL 74
           D R++G+ ++ S L   +  LT +Y + + LG + M NR    LRG + +YN  +  LS 
Sbjct: 23  DSRVRGWFMLDSYL--PTFFLTVMYLLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSA 80

Query: 75  YIVYEFLMSGWLSTYTWRCDPVDYSNSPEA-LRMVRVAWLFLFSKFIELMDTVIFILRKK 133
           Y++ E ++S W   Y  +C   D +++ EA +R+ +V W + FSK +E +DT+ F+LRKK
Sbjct: 81  YMLAELILSTWEGGYNLQCQ--DLTSAGEADIRVAKVLWWYYFSKSVEFLDTIFFVLRKK 138

Query: 134 DGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPVAQP 193
             Q+TFLHV+HH+ +   WW  +   P G   F   +NS +H++MY YYGLS F P    
Sbjct: 139 TSQITFLHVYHHASMFNIWWCVLNWIPCGQSFFGPTLNSFIHILMYSYYGLSVF-PSMHK 197

Query: 194 YLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYH 253
           YLWWKK++T  QL+QFVL   H +    +  C + +  +I     Y     +LF NF+  
Sbjct: 198 YLWWKKYLTQAQLVQFVLTITH-TMSAVVKPCGFPFGCLIFQS-SYMLTLVILFLNFYVQ 255

Query: 254 SYTKGKRLPRALQQ 267
           +Y K K + + +Q+
Sbjct: 256 TYRK-KPMKKDMQE 268


>gi|23097310 elongation of very long chain fatty acids like 3 [Homo
           sapiens]
          Length = 270

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 27/241 (11%)

Query: 32  TSILLTYVYFVL-SLGPRIMANRKPFQLRGFMIVYNFSLVALSLY-------IVYEFLMS 83
           TS  +  +Y VL ++G   M  RK F L+G +I+++F L   S+        I+   L++
Sbjct: 36  TSFPIALIYLVLIAVGQNYMKERKGFNLQGPLILWSFCLAIFSILGAVRMWGIMGTVLLT 95

Query: 84  GWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVF 143
           G L       + +D S       +   +W+FL SK IEL DT   ILRK+   + F+H +
Sbjct: 96  GGLKQTVCFINFIDNST------VKFWSWVFLLSKVIELGDTAFIILRKR--PLIFIHWY 147

Query: 144 HHS--VLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPVAQPYLWWKKHM 201
           HHS  ++  S+ +  K+  GG   +   +N  VH IMY YY L A     +P       +
Sbjct: 148 HHSTVLVYTSFGYKNKVPAGG---WFVTMNFGVHAIMYTYYTLKAAN--VKPPKMLPMLI 202

Query: 202 TAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIW---MYGTIFFMLFSNFWYHSYTKG 258
           T++Q++Q  + ++     Y        +  + HL W   +Y T +F+LF++F+  +Y + 
Sbjct: 203 TSLQILQMFVGAIVSILTYIWRQDQGCHTTMEHLFWSFILYMT-YFILFAHFFCQTYIRP 261

Query: 259 K 259
           K
Sbjct: 262 K 262


>gi|195539343 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 23/234 (9%)

Query: 33  SILLTYVYFVLSLGPR-IMANRKPFQLRGFMIVYNFSLVALSL--------YIVYEFLMS 83
           S L + +Y     G R +M  R  F+LR  +++++ +L   S+        Y+VY  +  
Sbjct: 33  SFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAYMVYILMTK 92

Query: 84  GWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVF 143
           G   +    CD   Y N P +      A+ F+ SK  EL DT+  ILRK+  ++ FLH +
Sbjct: 93  GLKQSV---CDQGFY-NGPVSKFW---AYAFVLSKAPELGDTIFIILRKQ--KLIFLHWY 143

Query: 144 HH-SVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFG-PVAQPYLWWKKHM 201
           HH +VL +SW+    +  GG G F  M N  VH +MY YY L A G  V++ +  +    
Sbjct: 144 HHITVLLYSWYSYKDMVAGG-GWFMTM-NYGVHAVMYSYYALRAAGFRVSRKFAMFITLS 201

Query: 202 TAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSY 255
              Q++   +V+  +  +     C+  +  I     MY   + +LF +F++ +Y
Sbjct: 202 QITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMY-LSYLVLFCHFFFEAY 254


>gi|13129088 elongation of very long chain fatty acids-like 6 [Homo
           sapiens]
          Length = 265

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 23/234 (9%)

Query: 33  SILLTYVYFVLSLGPR-IMANRKPFQLRGFMIVYNFSLVALSL--------YIVYEFLMS 83
           S L + +Y     G R +M  R  F+LR  +++++ +L   S+        Y+VY  +  
Sbjct: 33  SFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTLAVFSIFGALRTGAYMVYILMTK 92

Query: 84  GWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVF 143
           G   +    CD   Y N P +      A+ F+ SK  EL DT+  ILRK+  ++ FLH +
Sbjct: 93  GLKQSV---CDQGFY-NGPVSKFW---AYAFVLSKAPELGDTIFIILRKQ--KLIFLHWY 143

Query: 144 HH-SVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFG-PVAQPYLWWKKHM 201
           HH +VL +SW+    +  GG G F  M N  VH +MY YY L A G  V++ +  +    
Sbjct: 144 HHITVLLYSWYSYKDMVAGG-GWFMTM-NYGVHAVMYSYYALRAAGFRVSRKFAMFITLS 201

Query: 202 TAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSY 255
              Q++   +V+  +  +     C+  +  I     MY   + +LF +F++ +Y
Sbjct: 202 QITQMLMGCVVNYLVFCWMQHDQCHSHFQNIFWSSLMY-LSYLVLFCHFFFEAY 254


>gi|239749085 PREDICTED: hypothetical protein XP_002346899, partial
           [Homo sapiens]
          Length = 108

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 209 FVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTK 257
           +V V +++  Y ++  C Y Y  I   ++MY  I+   +++ + ++YT+
Sbjct: 24  YVYVCIYVYVYAYICICVYMYTCICVYVFMY--IYIYTYTHIYTYTYTR 70


>gi|239743111 PREDICTED: hypothetical protein XP_002342756, partial
           [Homo sapiens]
          Length = 108

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 209 FVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTK 257
           +V V +++  Y ++  C Y Y  I   ++MY  I+   +++ + ++YT+
Sbjct: 24  YVYVCIYVYVYAYICICVYMYTCICVYVFMY--IYIYTYTHIYTYTYTR 70


>gi|239747244 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 719

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 15/47 (31%)

Query: 224 SCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGA 270
           SC + +P         GT+FF +F +FW H       LP AL+   A
Sbjct: 256 SCLFDHP---------GTVFFSIFMSFWGHG------LPGALEAGSA 287


>gi|239741065 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 494

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 15/47 (31%)

Query: 224 SCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGA 270
           SC + +P         GT+FF +F +FW H       LP AL+   A
Sbjct: 52  SCLFDHP---------GTVFFSIFMSFWGHG------LPGALEAGSA 83


>gi|110624787 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
          Length = 1693

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 140 LHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVH 175
           LH ++H V  WSW++    AP  +   H +    +H
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAP-FLSDIHNISTLKIH 501


>gi|110624792 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
          Length = 1706

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 140 LHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVH 175
           LH ++H V  WSW++    AP  +   H +    +H
Sbjct: 467 LHYYYHGVQSWSWYYPYHYAP-FLSDIHNISTLKIH 501


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.141    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,272,922
Number of Sequences: 37866
Number of extensions: 409833
Number of successful extensions: 1105
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 17
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.