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Search of human proteins with 61658638
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61658638 interleukin 32 isoform C [Homo sapiens]
(168 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61658638 interleukin 32 isoform C [Homo sapiens] 352 1e-97
gi|61658636 interleukin 32 isoform C [Homo sapiens] 352 1e-97
gi|61658642 interleukin 32 isoform B [Homo sapiens] 340 4e-94
gi|61658632 interleukin 32 isoform B [Homo sapiens] 340 4e-94
gi|61639471 interleukin 32 isoform B [Homo sapiens] 340 4e-94
gi|61639466 interleukin 32 isoform B [Homo sapiens] 340 4e-94
gi|61658640 interleukin 32 isoform D [Homo sapiens] 326 7e-90
gi|61658634 interleukin 32 isoform A [Homo sapiens] 184 2e-47
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.12
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.12
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 32 0.20
gi|4758942 septin 4 isoform 1 [Homo sapiens] 32 0.26
gi|17986247 septin 4 isoform 3 [Homo sapiens] 32 0.26
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 0.97
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 29 1.7
gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo... 28 3.7
gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo... 28 3.7
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 28 4.8
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 28 4.8
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 28 4.8
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 28 4.8
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 28 4.8
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 28 4.8
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens] 28 4.8
gi|89941470 ankyrin repeat domain 34 [Homo sapiens] 28 4.8
gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens] 27 6.3
gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens] 27 6.3
gi|78499633 phospholipase C, eta 2 [Homo sapiens] 27 8.3
gi|4506567 RNA (guanine-7-) methyltransferase [Homo sapiens] 27 8.3
gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens] 27 8.3
>gi|61658638 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 352 bits (902), Expect = 1e-97
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL 60
MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL
Sbjct: 1 MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL 60
Query: 61 RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA 120
RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA
Sbjct: 61 RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA 120
Query: 121 VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 121 VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
>gi|61658636 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 352 bits (902), Expect = 1e-97
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL 60
MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL
Sbjct: 1 MCFPKVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGL 60
Query: 61 RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA 120
RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA
Sbjct: 61 RCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHA 120
Query: 121 VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 121 VQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
>gi|61658642 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 340 bits (871), Expect = 4e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 161 CSEPQSSK 168
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658632 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 340 bits (871), Expect = 4e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 161 CSEPQSSK 168
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639471 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 340 bits (871), Expect = 4e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 161 CSEPQSSK 168
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639466 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 340 bits (871), Expect = 4e-94
Identities = 168/188 (89%), Positives = 168/188 (89%), Gaps = 20/188 (10%)
Query: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 161 CSEPQSSK 168
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658640 interleukin 32 isoform D [Homo sapiens]
Length = 179
Score = 326 bits (835), Expect = 7e-90
Identities = 159/179 (88%), Positives = 161/179 (89%), Gaps = 11/179 (6%)
Query: 1 MCFPKVLSDDMKKLKARMVMS-----------SLAELEDDFKEGYLETVAAYYEEQHPEL 49
MCFPKVLSDDMKKLKARM + +DDFKEGYLETVAAYYEEQHPEL
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL 60
Query: 50 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 109
TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW
Sbjct: 61 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 120
Query: 110 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 121 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 179
>gi|61658634 interleukin 32 isoform A [Homo sapiens]
Length = 131
Score = 184 bits (468), Expect = 2e-47
Identities = 109/188 (57%), Positives = 110/188 (58%), Gaps = 77/188 (40%)
Query: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
Query: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
SFC +SYGAPRGDKEELTPQK
Sbjct: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
Query: 161 CSEPQSSK 168
CSEPQSSK
Sbjct: 124 CSEPQSSK 131
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 105 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 164
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 105 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 164
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 32.3 bits (72), Expect = 0.20
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 34 YLETVAAYYEEQHPELTPLLEKERDGLRCR------GNRSPVPDVEDPATEEPGESFCDK 87
+ + A EE+ L L+++R +RCR + P+ PA G+S C +
Sbjct: 739 FFNSAVASAEEEQARLRGQLKEQR--VRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGE 796
Query: 88 VMRWFQAMLQRLQTWWHGVL---AWVKEKVVALVH 119
R Q +++LQ+ + ++ A +KE+V L H
Sbjct: 797 THRALQGAMEKLQSRFMELMQEKADLKERVEELEH 831
>gi|4758942 septin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 32.0 bits (71), Expect = 0.26
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 10 DMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPV 69
D KL+ +V + + +L+D +E + E Y + +T L+ KER+ R + R
Sbjct: 379 DFVKLRTMLVRTHMQDLKDVTRETHYEN---YRAQCIQSMTRLVVKERN--RNKLTRESG 433
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKE 112
D PA + +K++R L+R+Q H + +KE
Sbjct: 434 TDFPIPAVPPGTDPETEKLIREKDEELRRMQEMLHKIQKQMKE 476
>gi|17986247 septin 4 isoform 3 [Homo sapiens]
Length = 459
Score = 32.0 bits (71), Expect = 0.26
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 10 DMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPV 69
D KL+ +V + + +L+D +E + E Y + +T L+ KER+ R + R
Sbjct: 360 DFVKLRTMLVRTHMQDLKDVTRETHYEN---YRAQCIQSMTRLVVKERN--RNKLTRESG 414
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKE 112
D PA + +K++R L+R+Q H + +KE
Sbjct: 415 TDFPIPAVPPGTDPETEKLIREKDEELRRMQEMLHKIQKQMKE 457
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 30.0 bits (66), Expect = 0.97
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 39 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFC 85
+AY+ + E E+ +C G+R+P P++ P+T +P E C
Sbjct: 995 SAYFSDLEAEAEATSGPEK---KCGGDRAPGPELGLPSTGQPSEQVC 1038
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 29.3 bits (64), Expect = 1.7
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 54 EKERDGLRCRGNRSPVPDVE-DPATEEP 80
++E+D R RG+ SP DVE + TEEP
Sbjct: 349 DREKDSTRSRGSDSPAADVEIEYVTEEP 376
>gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo
sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 3.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 49 LTPLLEKERDGLRCRGNRSPVPDVED 74
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo
sapiens]
Length = 666
Score = 28.1 bits (61), Expect = 3.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 49 LTPLLEKERDGLRCRGNRSPVPDVED 74
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 27.7 bits (60), Expect = 4.8
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 51 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 82
PL E ERDG VEDPA EPGE
Sbjct: 168 PLDESERDG-------GSEDQVEDPALSEPGE 192
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 27.7 bits (60), Expect = 4.8
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 51 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 82
PL E ERDG VEDPA EPGE
Sbjct: 132 PLDESERDG-------GSEDQVEDPALSEPGE 156
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 70 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
Length = 4624
Score = 27.7 bits (60), Expect = 4.8
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 6 VLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCR 63
V+ ++ L + + + AEL+D K+ L+ V A YE+ E LLE D RCR
Sbjct: 3431 VVQENRHLLAMQDLQKAQAELDD--KQAELDVVQAEYEQAMTEKQTLLE---DAERCR 3483
>gi|89941470 ankyrin repeat domain 34 [Homo sapiens]
Length = 496
Score = 27.7 bits (60), Expect = 4.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 65 NRSPVPDVEDPATEEPGESFC 85
N P P VEDPA P FC
Sbjct: 161 NSPPSPGVEDPAPASPSPGFC 181
>gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens]
Length = 321
Score = 27.3 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 127 QFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCS 162
Q S+CC L E+F QS+ PR + T ++ S
Sbjct: 275 QKYSWCCHLEEVFRKVQQSFETPRAKAQMPTIERLS 310
>gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens]
Length = 377
Score = 27.3 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 127 QFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCS 162
Q S+CC L E+F QS+ PR + T ++ S
Sbjct: 331 QKYSWCCHLEEVFRKVQQSFETPRAKAQMPTIERLS 366
>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
Length = 1416
Score = 26.9 bits (58), Expect = 8.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 47 PELTPLLE-KERDGLRCRGNRSPVPDVEDPATEEP 80
P+L P+ + K LR G R P+PD P + P
Sbjct: 1192 PDLPPVTKSKSNPNLRATGQRPPIPDELQPRSLAP 1226
>gi|4506567 RNA (guanine-7-) methyltransferase [Homo sapiens]
Length = 476
Score = 26.9 bits (58), Expect = 8.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 5 KVLSDDMKKLKARMVMSSLAELEDDFKEGYLETVAAYYEE 44
K + D + K ++ + + E + + +EG+ TVAA+Y E
Sbjct: 116 KSSTGDGTQNKRKIALEDVPEKQKNLEEGHSSTVAAHYNE 155
>gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens]
Length = 804
Score = 26.9 bits (58), Expect = 8.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 49 LTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKV 88
L+PLL G RG+R P ++ T E GES CD++
Sbjct: 547 LSPLLP----GGGGRGSRGPGNPLDHQITNERGESSCDRL 582
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,194,994
Number of Sequences: 37866
Number of extensions: 324756
Number of successful extensions: 940
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 913
Number of HSP's gapped (non-prelim): 34
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.