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Search of human proteins with 61658634
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61658634 interleukin 32 isoform A [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61658634 interleukin 32 isoform A [Homo sapiens] 273 4e-74
gi|61658642 interleukin 32 isoform B [Homo sapiens] 237 2e-63
gi|61658632 interleukin 32 isoform B [Homo sapiens] 237 2e-63
gi|61639471 interleukin 32 isoform B [Homo sapiens] 237 2e-63
gi|61639466 interleukin 32 isoform B [Homo sapiens] 237 2e-63
gi|61658640 interleukin 32 isoform D [Homo sapiens] 214 1e-56
gi|61658638 interleukin 32 isoform C [Homo sapiens] 184 1e-47
gi|61658636 interleukin 32 isoform C [Homo sapiens] 184 1e-47
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 0.54
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 30 0.70
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho... 30 0.70
gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 30 0.70
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 29 0.92
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 29 0.92
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo... 29 1.2
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo... 29 1.2
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo... 29 1.2
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 28 1.6
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 28 1.6
gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1... 28 1.6
gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2... 28 1.6
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 28 1.6
gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens] 28 2.1
gi|133925795 zinc finger, CCCH-type with G patch domain isoform ... 28 2.1
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 28 2.1
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 28 2.1
gi|133925793 zinc finger, CCCH-type with G patch domain isoform ... 28 2.1
gi|133925791 zinc finger, CCCH-type with G patch domain isoform ... 28 2.1
gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo... 28 2.1
gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo... 28 2.1
>gi|61658634 interleukin 32 isoform A [Homo sapiens]
Length = 131
Score = 273 bits (697), Expect = 4e-74
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELT 120
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELT
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELT 120
Query: 121 PQKCSEPQSSK 131
PQKCSEPQSSK
Sbjct: 121 PQKCSEPQSSK 131
>gi|61658642 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 237 bits (605), Expect = 2e-63
Identities = 129/188 (68%), Positives = 130/188 (69%), Gaps = 57/188 (30%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658632 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 237 bits (605), Expect = 2e-63
Identities = 129/188 (68%), Positives = 130/188 (69%), Gaps = 57/188 (30%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639471 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 237 bits (605), Expect = 2e-63
Identities = 129/188 (68%), Positives = 130/188 (69%), Gaps = 57/188 (30%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639466 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 237 bits (605), Expect = 2e-63
Identities = 129/188 (68%), Positives = 130/188 (69%), Gaps = 57/188 (30%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658640 interleukin 32 isoform D [Homo sapiens]
Length = 179
Score = 214 bits (546), Expect = 1e-56
Identities = 120/188 (63%), Positives = 121/188 (64%), Gaps = 66/188 (35%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 172 CSEPQSSK 179
>gi|61658638 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 184 bits (468), Expect = 1e-47
Identities = 109/188 (57%), Positives = 110/188 (58%), Gaps = 77/188 (40%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 161 CSEPQSSK 168
>gi|61658636 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 184 bits (468), Expect = 1e-47
Identities = 109/188 (57%), Positives = 110/188 (58%), Gaps = 77/188 (40%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
MCFPKVLSDDMKKLKARM VMSSLAELEDDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 40
Query: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 41 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 100
Query: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
SFC +SYGAPRGDKEELTPQK
Sbjct: 101 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 160
Query: 124 CSEPQSSK 131
CSEPQSSK
Sbjct: 161 CSEPQSSK 168
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 30.0 bits (66), Expect = 0.54
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 59 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFC 105
+AY+ + E E+ +C G+R+P P++ P+T +P E C
Sbjct: 995 SAYFSDLEAEAEATSGPEK---KCGGDRAPGPELGLPSTGQPSEQVC 1038
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 29.6 bits (65), Expect = 0.70
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 34 SGRGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDV- 92
SG G SS AE E+D K+G + EE+ T + R G + + D
Sbjct: 7 SGPGDTSSSAAEREEDRKDGEEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGDTP 66
Query: 93 EDPATEEPGESFCDKSYGA---PRGDKEELTPQKCSEPQ 128
+DPA S S + P GD E K SEPQ
Sbjct: 67 KDPAVISKSPSMAQDSGASELLPNGDLE-----KRSEPQ 100
>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
sapiens]
Length = 166
Score = 29.6 bits (65), Expect = 0.70
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 34 SGRGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDV- 92
SG G SS AE E+D K+G + EE+ T + R G + + D
Sbjct: 7 SGPGDTSSSAAEREEDRKDGEEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGDTP 66
Query: 93 EDPATEEPGESFCDKSYGA---PRGDKEELTPQKCSEPQ 128
+DPA S S + P GD E K SEPQ
Sbjct: 67 KDPAVISKSPSMAQDSGASELLPNGDLE-----KRSEPQ 100
>gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 29.6 bits (65), Expect = 0.70
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 34 SGRGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDV- 92
SG G SS AE E+D K+G + EE+ T + R G + + D
Sbjct: 7 SGPGDTSSSAAEREEDRKDGEEQEEPRGKEERQEPSTTARKVGRPGRKRKHPPVESGDTP 66
Query: 93 EDPATEEPGESFCDKSYGA---PRGDKEELTPQKCSEPQ 128
+DPA S S + P GD E K SEPQ
Sbjct: 67 KDPAVISKSPSMAQDSGASELLPNGDLE-----KRSEPQ 100
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 29.3 bits (64), Expect = 0.92
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 63 EEQHPELTPLLEKERDGLRCRGNR--SPVPDVED---PATEEPGESFCDKSYGAPRGDKE 117
EE+ TP E+++D + + +P P VE+ PA E+P ES + K+
Sbjct: 843 EEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKK 902
Query: 118 ELTPQK 123
TP+K
Sbjct: 903 VPTPEK 908
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 29.3 bits (64), Expect = 0.92
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 74 EKERDGLRCRGNRSPVPDVE-DPATEEP 100
++E+D R RG+ SP DVE + TEEP
Sbjct: 349 DREKDSTRSRGSDSPAADVEIEYVTEEP 376
>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
a [Homo sapiens]
Length = 739
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 390 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 420
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 90 PDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSSK 131
P+V PA E GES C +++ A +G E+L + Q +
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQR 187
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 90 PDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSSK 131
P+V PA E GES C +++ A +G E+L + Q +
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQR 187
>gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1
[Homo sapiens]
Length = 451
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYL 55
PK D++K+ +A E FY +++ + S L ELE ++ E +L
Sbjct: 97 PKATKQDLRKIL----EAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFL 144
>gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2
[Homo sapiens]
Length = 354
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 4 PKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYL 55
PK D++K+ +A E FY +++ + S L ELE ++ E +L
Sbjct: 97 PKATKQDLRKIL----EAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFL 144
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 28.5 bits (62), Expect = 1.6
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 7 LSDDMKKLKA---RMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKE-----GYLETV 58
L KKL+A RM + E + QNAE + A L ++ K+ +LE
Sbjct: 1735 LLSQKKKLEADVARMQKEAEEVVQECQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERT 1794
Query: 59 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 102
E+ +L L E + + G+R + +E E GE
Sbjct: 1795 RENMEQTITDLQKRL-AEAEQMALMGSRKQIQKLESRVRELEGE 1837
>gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens]
Length = 267
Score = 28.1 bits (61), Expect = 2.1
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 7 LSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMS-SLAELE-------DDFKEGYLETV 58
++ KL+ ++ + F+D ++ G Q MS L E++ DDF++ + E +
Sbjct: 77 VTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEM 136
Query: 59 AAYYEEQHPELTPLLEKERDGL 80
Y ++ P L E R L
Sbjct: 137 ELYRQKVEPLRAELQEGARQKL 158
>gi|133925795 zinc finger, CCCH-type with G patch domain isoform c
[Homo sapiens]
Length = 511
Score = 28.1 bits (61), Expect = 2.1
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 18 MHQAIERFYDKMQNAESGRGQVMSS-----LAELEDDFKEGYLETVAAYYEEQHPELTPL 72
+ A++ + ++Q E G + S L +L+ D KE T A+ + L
Sbjct: 6 LESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAA 65
Query: 73 LEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSS 130
L++ER G + + A E P A RG E P+ + P+S+
Sbjct: 66 LDEERPGRQEDAEYQAFREAITEAVEAP---------AAARGSGSETVPKAEAGPESA 114
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 28.1 bits (61), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 90 PDVEDPATEEPGESFCDKSYGAPRGDKEEL 119
P+V PA E GES C +++ A +G E+L
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKL 175
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 28.1 bits (61), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 90 PDVEDPATEEPGESFCDKSYGAPRGDKEEL 119
P+V PA E GES C +++ A +G E+L
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKL 175
>gi|133925793 zinc finger, CCCH-type with G patch domain isoform a
[Homo sapiens]
Length = 531
Score = 28.1 bits (61), Expect = 2.1
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 18 MHQAIERFYDKMQNAESGRGQVMSS-----LAELEDDFKEGYLETVAAYYEEQHPELTPL 72
+ A++ + ++Q E G + S L +L+ D KE T A+ + L
Sbjct: 6 LESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAA 65
Query: 73 LEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSS 130
L++ER G + + A E P A RG E P+ + P+S+
Sbjct: 66 LDEERPGRQEDAEYQAFREAITEAVEAP---------AAARGSGSETVPKAEAGPESA 114
>gi|133925791 zinc finger, CCCH-type with G patch domain isoform c
[Homo sapiens]
Length = 511
Score = 28.1 bits (61), Expect = 2.1
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 18 MHQAIERFYDKMQNAESGRGQVMSS-----LAELEDDFKEGYLETVAAYYEEQHPELTPL 72
+ A++ + ++Q E G + S L +L+ D KE T A+ + L
Sbjct: 6 LESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAA 65
Query: 73 LEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKSYGAPRGDKEELTPQKCSEPQSS 130
L++ER G + + A E P A RG E P+ + P+S+
Sbjct: 66 LDEERPGRQEDAEYQAFREAITEAVEAP---------AAARGSGSETVPKAEAGPESA 114
>gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo
sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 69 LTPLLEKERDGLRCRGNRSPVPDVED 94
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo
sapiens]
Length = 666
Score = 28.1 bits (61), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 69 LTPLLEKERDGLRCRGNRSPVPDVED 94
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,990,503
Number of Sequences: 37866
Number of extensions: 308337
Number of successful extensions: 937
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 887
Number of HSP's gapped (non-prelim): 81
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.