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Search of human proteins with 5901964
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5901964 HERV-H LTR-associating 2 [Homo sapiens]
(414 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5901964 HERV-H LTR-associating 2 [Homo sapiens] 844 0.0
gi|99028881 V-set domain containing T cell activation inhibitor ... 87 3e-17
gi|67188443 CD276 antigen isoform a [Homo sapiens] 76 6e-14
gi|13376852 CD276 antigen isoform b [Homo sapiens] 71 2e-12
gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens] 56 5e-08
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens] 56 7e-08
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens] 56 7e-08
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens] 56 7e-08
gi|7661534 CD274 molecule [Homo sapiens] 51 2e-06
gi|239753613 PREDICTED: similar to hCG1657343 [Homo sapiens] 50 4e-06
gi|239748209 PREDICTED: similar to hCG1657343 [Homo sapiens] 50 4e-06
gi|239742107 PREDICTED: similar to hCG1657343 [Homo sapiens] 50 4e-06
gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo... 47 2e-05
gi|9624969 butyrophilin-like 2 [Homo sapiens] 47 3e-05
gi|37221189 butyrophilin, subfamily 3, member A1 isoform b [Homo... 47 4e-05
gi|222418660 butyrophilin, subfamily 3, member A1 isoform d [Hom... 47 4e-05
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo... 47 4e-05
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ... 47 4e-05
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo... 46 7e-05
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 45 9e-05
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 45 1e-04
gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4 pr... 44 2e-04
gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4 p... 44 2e-04
gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5 pr... 44 2e-04
gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2 pr... 44 2e-04
gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3 p... 44 2e-04
gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3 pr... 44 2e-04
gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1 pr... 44 2e-04
gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2 p... 44 2e-04
gi|56788381 myelin oligodendrocyte glycoprotein isoform alpha1 p... 44 2e-04
>gi|5901964 HERV-H LTR-associating 2 [Homo sapiens]
Length = 414
Score = 844 bits (2180), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MKAQTALSFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV 60
MKAQTALSFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV
Sbjct: 1 MKAQTALSFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV 60
Query: 61 IHWKYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYT 120
IHWKYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYT
Sbjct: 61 IHWKYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYT 120
Query: 121 CYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKMDNTPIS 180
CYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKMDNTPIS
Sbjct: 121 CYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKMDNTPIS 180
Query: 181 ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS 240
ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS
Sbjct: 181 ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS 240
Query: 241 LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF 300
LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF
Sbjct: 241 LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF 300
Query: 301 SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL 360
SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL
Sbjct: 301 SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL 360
Query: 361 LIWSVKCCRAQLEARRSRHPADGAQQERCCVPPGERCPSAPDNGEENVPLSGKV 414
LIWSVKCCRAQLEARRSRHPADGAQQERCCVPPGERCPSAPDNGEENVPLSGKV
Sbjct: 361 LIWSVKCCRAQLEARRSRHPADGAQQERCCVPPGERCPSAPDNGEENVPLSGKV 414
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 87.0 bits (214), Expect = 3e-17
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 10/190 (5%)
Query: 41 GRLDEDIILPSSFE---RGSEVVIHWKYQDSYK-VHSYYKGSDHLESQDPRYANRTSLFY 96
G + ED IL +FE + S++VI W + VH + +G D L QD + RT++F
Sbjct: 46 GNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFA 105
Query: 97 NEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSF 156
+++ GNASL + V L D G Y CY+ T+ + K G F P + + ++
Sbjct: 106 DQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSET 165
Query: 157 LICSVLSVYPRPIITW--KMDN----TPISENNMEETGSLDSFSINSPLNITGSNSSYEC 210
L C +P+P + W ++D + +S + E + + S L N++Y C
Sbjct: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
Query: 211 TIENSLLKQT 220
IEN + K T
Sbjct: 226 MIENDIAKAT 235
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 75.9 bits (185), Expect = 6e-14
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 39/357 (10%)
Query: 24 FPLAFFIYVPMNEQIVIGRLDEDIILPSSF--ERG---SEVVIHWKYQDSYK-VHSYYKG 77
F L + V + E V+ + D L SF E G +++ + W+ D+ + VHS+ +G
Sbjct: 23 FCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFAEG 82
Query: 78 SDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYV------GTAIQVIT 131
D Q YANRT+LF + + GNASL +RV + DEG +TC+V A+ +
Sbjct: 83 QD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSLQV 138
Query: 132 NKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWK-MDNTPISEN--NMEETG 188
K + L P +T + + CS YP + W+ P++ N +
Sbjct: 139 AAPYSKPSMTLEPNKDLRPGDTVT-ITCSSYQGYPEAEVFWQDGQGVPLTGNVTTSQMAN 197
Query: 189 SLDSFSINSPLNIT-GSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVSLSCQPV- 246
F ++S L + G+N +Y C + N +L+Q T+ + V + PV
Sbjct: 198 EQGLFDVHSILRVVLGANGTYSCLVRNPVLQQDAHSSVTITPQRSPTGAVEVQVPEDPVV 257
Query: 247 ---------NDYFSPNQDFKVTWSRM---KSGTFSVLAYYLSSSQNTIINESRFSWNKEL 294
FSP F + + + T ++ + +R + +L
Sbjct: 258 ALVGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYANRTALFPDL 317
Query: 295 INQSDFSMNLMDLNLSDSGEYLCNISSDEY----TLLTIHTVHVEPSQETASHNKGL 347
+ Q + S+ L + ++D G + C +S ++ L + + +PS T NK L
Sbjct: 318 LAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSLQVAAPYSKPSM-TLEPNKDL 373
Score = 70.5 bits (171), Expect = 3e-12
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 30 IYVPMNEQIVIGRLDEDIILPSSF--ERG---SEVVIHWKYQDSYK-VHSYYKGSDHLES 83
+ V + E V+ + D L SF E G +++ + W+ D+ + VHS+ +G D
Sbjct: 247 VEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRD---- 302
Query: 84 QDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVG------TAIQVITNKVVLK 137
Q YANRT+LF + + GNASL +RV + DEG +TC+V A+ + K
Sbjct: 303 QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSLQVAAPYSK 362
Query: 138 VGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKM-DNTPISEN--NMEETGSLDSFS 194
+ L P +T + + CS YP + W+ P++ N + F
Sbjct: 363 PSMTLEPNKDLRPGDTVT-ITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFD 421
Query: 195 INSPLNIT-GSNSSYECTIENSLLKQTWTGRWTM 227
++S L + G+N +Y C + N +L+Q G T+
Sbjct: 422 VHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTI 455
>gi|13376852 CD276 antigen isoform b [Homo sapiens]
Length = 316
Score = 70.9 bits (172), Expect = 2e-12
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 24 FPLAFFIYVPMNEQIVIGRLDEDIILPSSF--ERG---SEVVIHWKYQDSYK-VHSYYKG 77
F L + V + E V+ + D L SF E G +++ + W+ D+ + VHS+ +G
Sbjct: 23 FCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFAEG 82
Query: 78 SDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYV------GTAIQVIT 131
D Q YANRT+LF + + GNASL +RV + DEG +TC+V A+ +
Sbjct: 83 QD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSLQV 138
Query: 132 NKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWK-MDNTPISEN--NMEETG 188
K + L P +T + + CS YP + W+ P++ N +
Sbjct: 139 AAPYSKPSMTLEPNKDLRPGDTVT-ITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQMAN 197
Query: 189 SLDSFSINSPLNIT-GSNSSYECTIENSLLKQTWTGRWTM 227
F ++S L + G+N +Y C + N +L+Q G T+
Sbjct: 198 EQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTI 237
>gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens]
Length = 302
Score = 56.2 bits (134), Expect = 5e-08
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 GSQGIFPLAFF-IYVPMNEQIVIGRLDEDIILPSSFERGS-----EVVIHWKYQDSYKVH 72
GS G+ L F + E+ V + D+ L + GS +V ++W+ +S V
Sbjct: 4 GSPGLLFLLFSSLRADTQEKEVRAMVGSDVELSCACPEGSRFDLNDVYVYWQTSESKTVV 63
Query: 73 SYY-KGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAI---- 127
+Y+ + LE+ D RY NR + + G+ SL V+ DE + C V +
Sbjct: 64 TYHIPQNSSLENVDSRYRNRALMSPAGMLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQ 123
Query: 128 QVITNKVVLKVGV-FLTPVMK--YEKRNTNSFLICSVLSVYPRPIITW--KMDNTPISEN 182
+V++ +V L V F PV+ + C+ ++ YPRP + W K DN+ + +
Sbjct: 124 EVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKTDNSLLDQA 183
Query: 183 NMEETGSLDS---FSINSPLNITGSNS-SYECTIENSLLKQTWT 222
+T L+ + + S L I + S + C IEN LL+Q T
Sbjct: 184 LQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLT 227
>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]
Length = 340
Score = 55.8 bits (133), Expect = 7e-08
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 66 QDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGT 125
Q S VH Y G D Q P+Y RT L + I G SL +++LD G+Y C + +
Sbjct: 59 QFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISS 118
Query: 126 AIQVITNKVVLKV------GVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWK----MD 175
Q K + ++ V L + Y R+ L+C +PRP WK D
Sbjct: 119 --QSYYQKAIWELQVSALGSVPLISITGYVDRDIQ--LLCQSSGWFPRPTAKWKGPQGQD 174
Query: 176 NTPISENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQ 235
+ S N + G F + L + + S C++ ++ L + R + D +
Sbjct: 175 LSTDSRTNRDMHG---LFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGDTFFEPI 231
Query: 236 SEHVS 240
S H++
Sbjct: 232 SWHLA 236
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 215 SLLKQTWTGRWTM---KDGLHKMQSEHVSLSCQPVNDYFSPNQDFKVTWSRMKSGTFS-V 270
SLLK +G+W + + + E + SC + SP + + R G FS V
Sbjct: 10 SLLK-LGSGQWQVFGPDKPVQALVGEDAAFSC-----FLSPKTNAEAMEVRFFRGQFSSV 63
Query: 271 LAYYLSSSQNTIINESRFSWNKELINQS----DFSMNLMDLNLSDSGEYLCNISSDEY 324
+ Y + ++ +L+ S S+ L ++ + D+G Y C ISS Y
Sbjct: 64 VHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQSY 121
>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]
Length = 500
Score = 55.8 bits (133), Expect = 7e-08
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 66 QDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGT 125
Q S VH Y G D Q P+Y RT L + I G SL +++LD G+Y C + +
Sbjct: 59 QFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISS 118
Query: 126 AIQVITNKVVLKV------GVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWK----MD 175
Q K + ++ V L + Y R+ L+C +PRP WK D
Sbjct: 119 --QSYYQKAIWELQVSALGSVPLISITGYVDRDIQ--LLCQSSGWFPRPTAKWKGPQGQD 174
Query: 176 NTPISENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQ 235
+ S N + G F + L + + S C++ ++ L + R + D +
Sbjct: 175 LSTDSRTNRDMHG---LFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGDTFFEPI 231
Query: 236 SEHVS 240
S H++
Sbjct: 232 SWHLA 236
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 215 SLLKQTWTGRWTM---KDGLHKMQSEHVSLSCQPVNDYFSPNQDFKVTWSRMKSGTFS-V 270
SLLK +G+W + + + E + SC + SP + + R G FS V
Sbjct: 10 SLLK-LGSGQWQVFGPDKPVQALVGEDAAFSC-----FLSPKTNAEAMEVRFFRGQFSSV 63
Query: 271 LAYYLSSSQNTIINESRFSWNKELINQS----DFSMNLMDLNLSDSGEYLCNISSDEY 324
+ Y + ++ +L+ S S+ L ++ + D+G Y C ISS Y
Sbjct: 64 VHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQSY 121
>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]
Length = 347
Score = 55.8 bits (133), Expect = 7e-08
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 17/185 (9%)
Query: 66 QDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGT 125
Q S VH Y G D Q P+Y RT L + I G SL +++LD G+Y C + +
Sbjct: 59 QFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISS 118
Query: 126 AIQVITNKVVLKV------GVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWK----MD 175
Q K + ++ V L + Y R+ L+C +PRP WK D
Sbjct: 119 --QSYYQKAIWELQVSALGSVPLISITGYVDRDIQ--LLCQSSGWFPRPTAKWKGPQGQD 174
Query: 176 NTPISENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQ 235
+ S N + G F + L + + S C++ ++ L + R + D +
Sbjct: 175 LSTDSRTNRDMHG---LFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGDTFFEPI 231
Query: 236 SEHVS 240
S H++
Sbjct: 232 SWHLA 236
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 215 SLLKQTWTGRWTM---KDGLHKMQSEHVSLSCQPVNDYFSPNQDFKVTWSRMKSGTFS-V 270
SLLK +G+W + + + E + SC + SP + + R G FS V
Sbjct: 10 SLLK-LGSGQWQVFGPDKPVQALVGEDAAFSC-----FLSPKTNAEAMEVRFFRGQFSSV 63
Query: 271 LAYYLSSSQNTIINESRFSWNKELINQS----DFSMNLMDLNLSDSGEYLCNISSDEY 324
+ Y + ++ +L+ S S+ L ++ + D+G Y C ISS Y
Sbjct: 64 VHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQSY 121
>gi|7661534 CD274 molecule [Homo sapiens]
Length = 290
Score = 51.2 bits (121), Expect = 2e-06
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Query: 59 VVIHWKYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGI 118
++++W+ +D + + G + L+ Q Y R L +++ GNA+L V L D G+
Sbjct: 53 LIVYWEMEDK-NIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGV 111
Query: 119 YTC---YVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITWKMD 175
Y C Y G + IT KV ++ + + L C YP+ + W
Sbjct: 112 YRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQA-EGYPKAEVIWTSS 170
Query: 176 NTPISENNMEETGSLDS---FSINSPLNI-TGSNSSYECT 211
+ + T S F++ S L I T +N + CT
Sbjct: 171 DHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCT 210
>gi|239753613 PREDICTED: similar to hCG1657343 [Homo sapiens]
Length = 346
Score = 50.1 bits (118), Expect = 4e-06
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 29 FIYVPMNEQIVIGRLDEDIILPSSFERGSEVVIHWKYQDSYKVHS-----YYKGSDHLES 83
F +V E + EDI E E + +KY D ++V S ++ ++ LE
Sbjct: 89 FSFVKGTENLEFSWEREDIKQAYEVEDNKEYYLLFKYLDFFEVFSKLVYQFHNNTEQLED 148
Query: 84 QDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTC 121
Q+ Y R S+ EI G SL R V +DE IY C
Sbjct: 149 QNSLYEGRVSVDQAEISEGTLSLLLRNVDFMDEAIYKC 186
>gi|239748209 PREDICTED: similar to hCG1657343 [Homo sapiens]
Length = 346
Score = 50.1 bits (118), Expect = 4e-06
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 29 FIYVPMNEQIVIGRLDEDIILPSSFERGSEVVIHWKYQDSYKVHS-----YYKGSDHLES 83
F +V E + EDI E E + +KY D ++V S ++ ++ LE
Sbjct: 89 FSFVKGTENLEFSWEREDIKQAYEVEDNKEYYLLFKYLDFFEVFSKLVYQFHNNTEQLED 148
Query: 84 QDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTC 121
Q+ Y R S+ EI G SL R V +DE IY C
Sbjct: 149 QNSLYEGRVSVDQAEISEGTLSLLLRNVDFMDEAIYKC 186
>gi|239742107 PREDICTED: similar to hCG1657343 [Homo sapiens]
Length = 346
Score = 50.1 bits (118), Expect = 4e-06
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 29 FIYVPMNEQIVIGRLDEDIILPSSFERGSEVVIHWKYQDSYKVHS-----YYKGSDHLES 83
F +V E + EDI E E + +KY D ++V S ++ ++ LE
Sbjct: 89 FSFVKGTENLEFSWEREDIKQAYEVEDNKEYYLLFKYLDFFEVFSKLVYQFHNNTEQLED 148
Query: 84 QDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTC 121
Q+ Y R S+ EI G SL R V +DE IY C
Sbjct: 149 QNSLYEGRVSVDQAEISEGTLSLLLRNVDFMDEAIYKC 186
>gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo
sapiens]
Length = 334
Score = 47.4 bits (111), Expect = 2e-05
Identities = 64/229 (27%), Positives = 87/229 (37%), Gaps = 14/229 (6%)
Query: 1 MKAQTALSFFLILI-TSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSS-FERGSE 58
MK ++L+F L+ SL Q + P + V ++ + ED LP F S
Sbjct: 1 MKMASSLAFLLLNFHVSLLLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSA 60
Query: 59 VVIHWKYQDS---YKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLD 115
+ K+ S V+ Y G + + Q Y RTS+ + I G A+L V+ D
Sbjct: 61 ETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASD 120
Query: 116 EGIYTCYVGTAIQVITNKVVLKVGV----FLTPVMKYEKRNTNSFLICSVLSVYPRPIIT 171
G Y CY V LKV V YE + L C YP+P I
Sbjct: 121 SGKYLCYFQDGDFYEKALVELKVAALGSNLHVEVKGYEDGGIH--LECRSTGWYPQPQIQ 178
Query: 172 W---KMDNTPISENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLL 217
W K +N P E + G S + GS C I NSLL
Sbjct: 179 WSNAKGENIPAVEAPVVADGVGLYEVAASVIMRGGSGEGVSCIIRNSLL 227
>gi|9624969 butyrophilin-like 2 [Homo sapiens]
Length = 455
Score = 47.0 bits (110), Expect = 3e-05
Identities = 71/350 (20%), Positives = 133/350 (38%), Gaps = 46/350 (13%)
Query: 6 ALSFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSF---ERGSEVVIH 62
A++ FL ++ ++ S+ F + P + ++ + ED +L V +
Sbjct: 12 AVASFLFILLTMKQSED-----FRVIGPAHP--ILAGVGEDALLTCQLLPKRTTMHVEVR 64
Query: 63 W-KYQDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTC 121
W + + S V + G + E Q Y N I GN +L + D G Y C
Sbjct: 65 WYRSEPSTPVFVHRDGVEVTEMQMEEYRGWVEWIENGIAKGNVALKIHNIQPSDNGQYWC 124
Query: 122 YVGTAIQVITNKVVLKV-GVFLTPVMKYEKRNTNSF-LICSVLSVYPRPIITWK----MD 175
+ ++LKV G+ P + E + L+C+ +P P + W+
Sbjct: 125 HFQDGNYCGETSLLLKVAGLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYWEDIRGEK 184
Query: 176 NTPISENNMEETGSLDSFSINSPLNI-TGSNSSYECTIENSLLKQTWTGRWTMKDGLHKM 234
+SE+ +++ L F + L + S S C + N +L + ++ + K+
Sbjct: 185 LLAVSEHRIQDKDGL--FYAEATLVVRNASAESVSCLVHNPVLTEEKGSVISLPE---KL 239
Query: 235 QSEHVSLS----CQPV----------NDYFSPN---QDFKVTWSRMKSGTFSVLAYYLS- 276
Q+E SL QP+ Y SP Q +V W R S + + Y+
Sbjct: 240 QTELASLKVNGPSQPILVRVGEDIQLTCYLSPKANAQSMEVRWDR--SHRYPAVHVYMDG 297
Query: 277 ---SSQNTIINESRFSWNKELINQSDFSMNLMDLNLSDSGEYLCNISSDE 323
+ + R + I++ ++ ++ SD G+Y C D+
Sbjct: 298 DHVAGEQMAEYRGRTVLVSDAIDEGRLTLQILSARPSDDGQYRCLFEKDD 347
Score = 37.7 bits (86), Expect = 0.019
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 8/174 (4%)
Query: 37 QIVIGRLDEDIILP---SSFERGSEVVIHWKYQDSYKVHSYYKGSDHLESQD-PRYANRT 92
Q ++ R+ EDI L S + + W Y Y DH+ + Y RT
Sbjct: 253 QPILVRVGEDIQLTCYLSPKANAQSMEVRWDRSHRYPAVHVYMDGDHVAGEQMAEYRGRT 312
Query: 93 SLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLK-VGVFLTPVMKYEKR 151
L + I G +L D+G Y C + LK V + +P++ E +
Sbjct: 313 VLVSDAIDEGRLTLQILSARPSDDGQYRCLFEKDDVYQEASLDLKVVSLGSSPLITVEGQ 372
Query: 152 NTNSFL-ICSVLSVYPRPIITWK-MDNTPISENNMEET-GSLDSFSINSPLNIT 202
+CS +P+P + W+ M+ I ++ T GS F + + L +T
Sbjct: 373 EDGEMQPMCSSDGWFPQPHVPWRDMEGKTIPSSSQALTQGSHGLFHVQTLLRVT 426
>gi|37221189 butyrophilin, subfamily 3, member A1 isoform b [Homo
sapiens]
Length = 352
Score = 46.6 bits (109), Expect = 4e-05
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 11/189 (5%)
Query: 39 VIGRLDEDIILPSS-FERGSEVVIHWKYQDS---YKVHSYYKGSDHLESQDPRYANRTSL 94
++ + ED LP F S + K+ S V+ Y G + + Q Y RTS+
Sbjct: 40 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSI 99
Query: 95 FYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLKVGVFLTPVMKYEK--RN 152
+ I G A+L V+ D G Y CY V LKV + + K ++
Sbjct: 100 LRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKD 159
Query: 153 TNSFLICSVLSVYPRPIITW---KMDNTPISENNMEETGSLDSFSINSPLNITGSN-SSY 208
L C YP+P I W K +N P E + G + +++ + + + GS+
Sbjct: 160 GGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADG-VGLYAVAASVIMRGSSGEGV 218
Query: 209 ECTIENSLL 217
CTI +SLL
Sbjct: 219 SCTIRSSLL 227
>gi|222418660 butyrophilin, subfamily 3, member A1 isoform d [Homo
sapiens]
Length = 378
Score = 46.6 bits (109), Expect = 4e-05
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 11/189 (5%)
Query: 39 VIGRLDEDIILPSS-FERGSEVVIHWKYQDS---YKVHSYYKGSDHLESQDPRYANRTSL 94
++ + ED LP F S + K+ S V+ Y G + + Q Y RTS+
Sbjct: 40 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSI 99
Query: 95 FYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLKVGVFLTPVMKYEK--RN 152
+ I G A+L V+ D G Y CY V LKV + + K ++
Sbjct: 100 LRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKD 159
Query: 153 TNSFLICSVLSVYPRPIITW---KMDNTPISENNMEETGSLDSFSINSPLNITGSN-SSY 208
L C YP+P I W K +N P E + G + +++ + + + GS+
Sbjct: 160 GGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADG-VGLYAVAASVIMRGSSGEGV 218
Query: 209 ECTIENSLL 217
CTI +SLL
Sbjct: 219 SCTIRSSLL 227
>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
sapiens]
Length = 513
Score = 46.6 bits (109), Expect = 4e-05
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 11/189 (5%)
Query: 39 VIGRLDEDIILPSS-FERGSEVVIHWKYQDS---YKVHSYYKGSDHLESQDPRYANRTSL 94
++ + ED LP F S + K+ S V+ Y G + + Q Y RTS+
Sbjct: 40 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSI 99
Query: 95 FYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLKVGVFLTPVMKYEK--RN 152
+ I G A+L V+ D G Y CY V LKV + + K ++
Sbjct: 100 LRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKD 159
Query: 153 TNSFLICSVLSVYPRPIITW---KMDNTPISENNMEETGSLDSFSINSPLNITGSN-SSY 208
L C YP+P I W K +N P E + G + +++ + + + GS+
Sbjct: 160 GGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADG-VGLYAVAASVIMRGSSGEGV 218
Query: 209 ECTIENSLL 217
CTI +SLL
Sbjct: 219 SCTIRSSLL 227
>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
sapiens]
Length = 584
Score = 46.6 bits (109), Expect = 4e-05
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 1 MKAQTALSFFLILI-TSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSS-FERGSE 58
MK ++L+F L+ SL Q + P + V ++ + ED LP F S
Sbjct: 1 MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSA 60
Query: 59 VVIHWKYQDS---YKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLD 115
+ ++ S V+ Y G + + Q Y RTS+ + I G A+L V+ D
Sbjct: 61 ETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASD 120
Query: 116 EGIYTCYVGTAIQVITNKVVLKVGVFLT----PVMKYEKRNTNSFLICSVLSVYPRPIIT 171
G Y CY V LKV + V YE + L C YP+P I
Sbjct: 121 SGKYLCYFQDGDFYEKALVELKVAALGSDLHIEVKGYEDGGIH--LECRSTGWYPQPQIK 178
Query: 172 W---KMDNTPISENNMEETGSLDSFSINSPLNITGSN-SSYECTIENSLL 217
W K +N P E + G + +++ + + + GS+ C I NSLL
Sbjct: 179 WSDTKGENIPAVEAPVVADG-VGLYAVAASVIMRGSSGGGVSCIIRNSLL 227
>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
sapiens]
Length = 542
Score = 45.8 bits (107), Expect = 7e-05
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 11/155 (7%)
Query: 71 VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVI 130
V+ Y G + + Q Y RTS+ + I G A+L V+ D G Y CY
Sbjct: 34 VNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYE 93
Query: 131 TNKVVLKVGVFLT----PVMKYEKRNTNSFLICSVLSVYPRPIITW---KMDNTPISENN 183
V LKV + V YE + L C YP+P I W K +N P E
Sbjct: 94 KALVELKVAALGSDLHIEVKGYEDGGIH--LECRSTGWYPQPQIKWSDTKGENIPAVEAP 151
Query: 184 MEETGSLDSFSINSPLNITGSN-SSYECTIENSLL 217
+ G + +++ + + + GS+ C I NSLL
Sbjct: 152 VVADG-VGLYAVAASVIMRGSSGGGVSCIIRNSLL 185
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 45.4 bits (106), Expect = 9e-05
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSE-VVIHW-KY 65
S L+L+ L + F + P N + + + + S E+ +E + + W +
Sbjct: 14 SLLLLLLLLLLSLCALVSAQFTVVGPANPILAMVGENTTLRCHLSPEKNAEDMEVRWFRS 73
Query: 66 QDSYKVHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYV-- 123
Q S V Y G + E Q Y R + +I G+ +L V+ + GIY CY
Sbjct: 74 QFSPAVFVYKGGRERTEEQMEEYRGRITFVSKDINRGSVALVIHNVTAQENGIYRCYFQE 133
Query: 124 GTAIQVITNKVVLKVGVFLTPVMKYEKRNTNS-FLICSVLSVYPRPIITWKMDNTPISE- 181
G + ++V+ G+ P+++ + + S +L C YP P+ W+ P E
Sbjct: 134 GRSYDEAILRLVV-AGLGSKPLIEIKAQEDGSIWLECISGGWYPEPLTVWR---DPYGEV 189
Query: 182 -NNMEETGSLDS---FSINSPLNITGSN-SSYECTIENSLLKQ 219
++E D+ F + + + I + C++ N+LL Q
Sbjct: 190 VPALKEVSIADADGLFMVTTAVIIRDKYVRNVSCSVNNTLLGQ 232
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 45.1 bits (105), Expect = 1e-04
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 77 GSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYV---GTAIQVITNK 133
G + Q P Y R +L + I G +L R V + D+G YTC+ G+ + + +
Sbjct: 80 GREQEAEQMPEYRGRATLVQDGIAKGRVALRIRGVRVSDDGEYTCFFREDGSYEEALVHL 139
Query: 134 VVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITW------KMDNTPISENNMEET 187
V +G M+ ++ N L C+ + YP P + W K +T S N EE
Sbjct: 140 KVAALGSDPHISMQVQE-NGEICLECTSVGWYPEPQVQWRTSKGEKFPSTSESRNPDEE- 197
Query: 188 GSLDSFSINSPLNITGSNS-SYECTIENSLLKQ 219
F++ + + I +++ + C I+N LL Q
Sbjct: 198 ---GLFTVAASVIIRDTSAKNVSCYIQNLLLGQ 227
>gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4
precursor [Homo sapiens]
Length = 171
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4
precursor [Homo sapiens]
Length = 171
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5
precursor [Homo sapiens]
Length = 213
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2
precursor [Homo sapiens]
Length = 206
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3
precursor [Homo sapiens]
Length = 224
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3
precursor [Homo sapiens]
Length = 229
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1
precursor [Homo sapiens]
Length = 252
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2
precursor [Homo sapiens]
Length = 208
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
>gi|56788381 myelin oligodendrocyte glycoprotein isoform alpha1
precursor [Homo sapiens]
Length = 247
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 8 SFFLILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFERGSEVV---IHWK 64
SF L+L+ +S S + F + P + + + +++ LP G + W
Sbjct: 15 SFLLLLLLQVSSS---YAGQFRVIGPRHP--IRALVGDEVELPCRISPGKNATGMEVGW- 68
Query: 65 YQDSYK--VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCY 122
Y+ + VH Y G D Q P Y RT L + I G +L R V DEG +TC+
Sbjct: 69 YRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCF 128
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,122,055
Number of Sequences: 37866
Number of extensions: 723355
Number of successful extensions: 2790
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 2245
Number of HSP's gapped (non-prelim): 700
length of query: 414
length of database: 18,247,518
effective HSP length: 105
effective length of query: 309
effective length of database: 14,271,588
effective search space: 4409920692
effective search space used: 4409920692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.