Search of human proteins with 58218986

Search of human proteins with 58218986

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58218986 thymocyte selection pathway associated [Homo
sapiens]
         (641 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58218986 thymocyte selection pathway associated [Homo sapiens]    1287   0.0  
gi|157738677 basement membrane-induced gene isoform 3 [Homo sapi...   278   8e-75
gi|87080807 basement membrane-induced gene isoform 1 [Homo sapiens]   116   7e-26
gi|87080817 basement membrane-induced gene isoform 2 [Homo sapiens]    80   8e-15
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          37   0.056
gi|21489959 immunoglobulin J chain [Homo sapiens]                      34   0.47 
gi|242117996 hypothetical protein LOC392307 [Homo sapiens]             32   1.4  
gi|34101286 zinc finger RNA binding protein [Homo sapiens]             31   3.1  
gi|38569394 inhibitor of kappa light polypeptide gene enhancer i...    31   4.0  
gi|5901962 MYST histone acetyltransferase 2 [Homo sapiens]             30   5.2  
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa...    30   6.8  
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi...    30   6.8  
gi|31621309 leucine rich repeat containing 6 [Homo sapiens]            30   6.8  
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    30   8.9  
gi|239757898 PREDICTED: similar to testis expressed sequence 13A...    30   8.9  
gi|239752412 PREDICTED: similar to testis expressed sequence 13A...    30   8.9  
gi|169216868 PREDICTED: similar to testis expressed sequence 13A...    30   8.9  
gi|189571621 HRAS-like suppressor 3 [Homo sapiens]                     30   8.9  
gi|189571618 HRAS-like suppressor 3 [Homo sapiens]                     30   8.9  

>gi|58218986 thymocyte selection pathway associated [Homo sapiens]
          Length = 641

 Score = 1287 bits (3331), Expect = 0.0
 Identities = 641/641 (100%), Positives = 641/641 (100%)

Query: 1   MALSLEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKII 60
           MALSLEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKII
Sbjct: 1   MALSLEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKII 60

Query: 61  AEICEQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQ 120
           AEICEQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQ
Sbjct: 61  AEICEQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQ 120

Query: 121 KDIKLENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDER 180
           KDIKLENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDER
Sbjct: 121 KDIKLENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDER 180

Query: 181 IYTLKEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKD 240
           IYTLKEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKD
Sbjct: 181 IYTLKEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKD 240

Query: 241 IIRILPSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQSI 300
           IIRILPSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQSI
Sbjct: 241 IIRILPSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQSI 300

Query: 301 LQPGKTIVIHKKYQASRILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAKS 360
           LQPGKTIVIHKKYQASRILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAKS
Sbjct: 301 LQPGKTIVIHKKYQASRILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAKS 360

Query: 361 EKEPLHVVATKAFHSPHDKLSSVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS 420
           EKEPLHVVATKAFHSPHDKLSSVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS
Sbjct: 361 EKEPLHVVATKAFHSPHDKLSSVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS 420

Query: 421 YEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVLAATPGLQ 480
           YEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVLAATPGLQ
Sbjct: 421 YEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVLAATPGLQ 480

Query: 481 LEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLVSNFSRDAEPFLVRTLVEEITEEQY 540
           LEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLVSNFSRDAEPFLVRTLVEEITEEQY
Sbjct: 481 LEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLVSNFSRDAEPFLVRTLVEEITEEQY 540

Query: 541 YMMRRYESSASHPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQ 600
           YMMRRYESSASHPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQ
Sbjct: 541 YMMRRYESSASHPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQ 600

Query: 601 AGLDSKVLIGSQNDLVDEEKERSNRGATAIAETFKNEKHQK 641
           AGLDSKVLIGSQNDLVDEEKERSNRGATAIAETFKNEKHQK
Sbjct: 601 AGLDSKVLIGSQNDLVDEEKERSNRGATAIAETFKNEKHQK 641


>gi|157738677 basement membrane-induced gene isoform 3 [Homo
           sapiens]
          Length = 643

 Score =  278 bits (712), Expect = 8e-75
 Identities = 197/592 (33%), Positives = 305/592 (51%), Gaps = 62/592 (10%)

Query: 5   LEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEIC 64
           L++FV +LD  +LPRVL + +G+Y EGSIYE+ GNECC STG++IK+T ++++K++    
Sbjct: 6   LQDFVRALDPASLPRVLRVCSGVYFEGSIYEISGNECCLSTGDLIKVTQVRLQKVVC--- 62

Query: 65  EQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQKDIK 124
              E  ++ Q  EL  NF G F  +     Y T+EE+         +L   CF     I 
Sbjct: 63  ---ENPKTSQTMELAPNFQGYFTPLNTPQSYETLEELVSATTQSSKQL-PTCFMSTHRIV 118

Query: 125 LENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDERIYTL 184
            E  ++ + + +ML +V    G     C +    Q    +LPLSQ+G F+  E     TL
Sbjct: 119 TEGRVVTEDQLLMLEAVVMHLGIRSARCVLGMEGQQVILHLPLSQKGPFWTWEPSAPRTL 178

Query: 185 KEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKDIIRI 244
            ++++    K+    + LT  +  W S           LIL+P YEIQ +M  R+ I++I
Sbjct: 179 LQVLQDPALKD----LVLTCPTLPWHS-----------LILRPQYEIQAIMHMRRTIVKI 223

Query: 245 LPSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQS----I 300
             +L+V+V+D+T S     F++ L   ++       FP+  E++E PEG  +  S     
Sbjct: 224 PSTLEVDVEDVTASSRHVHFIKPLLLSEVLAWEG-PFPLSMEILEVPEGRPIFLSPWVGS 282

Query: 301 LQPGKTIVIHKKYQAS-RILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAK 359
           LQ G+ + ++       R+LAS      P RHFL+   Y+GK +RRPREFPTAYDL  A 
Sbjct: 283 LQKGQRLCVYGLASPPWRVLASSKGRKVP-RHFLVSGGYQGKLRRRPREFPTAYDLLGAF 341

Query: 360 SEKEPLHVVATKAFHSPHD---KLSSVSVGDQFLV------HQSETTEVLCEGIKKVVNV 410
               PL VVATK      +   + +S++VGD+  V      H ++ ++         V+V
Sbjct: 342 QPGRPLRVVATKDCEGEREENPEFTSLAVGDRLEVLGPGQAHGAQGSD---------VDV 392

Query: 411 LACEKIL--------------KKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLP 456
           L C+++                +S E  LLP +  G FVE + D ++Y +++L  QF LP
Sbjct: 393 LVCQRLSDQAGEDEEEECKEEAESPERVLLPFHFPGSFVEEMSDSRRYSLADLTAQFSLP 452

Query: 457 FNVKVSVRDLSIEEDVLAATPGLQLEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLV 516
             VKV  +D S   D L +  GL+LEE IT+ +L++S  + P  C+EIP   L++TV   
Sbjct: 453 CEVKVVAKDTSHPTDPLTSFLGLRLEEKITEPFLVVSLDSEPGMCFEIPPRWLDLTVVKA 512

Query: 517 SNFSRDAEPFLVRTLVEEITEEQYYMMRRYES-SASHPPPRPPKHPSVEETK 567
                  E  L    VEE+T+  YY +R+  +     PPPRPPK+  + + +
Sbjct: 513 KGQPDLPEGSLPIATVEELTDTFYYRLRKLPACEIQAPPPRPPKNQGLSKQR 564


>gi|87080807 basement membrane-induced gene isoform 1 [Homo sapiens]
          Length = 260

 Score =  116 bits (290), Expect = 7e-26
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 22/231 (9%)

Query: 5   LEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEIC 64
           L++FV +LD  +LPRVL + +G+Y EGSIYE+ GNECC STG++IK+T ++++K++    
Sbjct: 6   LQDFVRALDPASLPRVLRVCSGVYFEGSIYEISGNECCLSTGDLIKVTQVRLQKVVC--- 62

Query: 65  EQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQKDIK 124
              E  ++ Q  EL  NF G F  +     Y T+EE+         +L   CF     I 
Sbjct: 63  ---ENPKTSQTMELAPNFQGYFTPLNTPQSYETLEELVSATTQSSKQL-PTCFMSTHRIV 118

Query: 125 LENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDERIYTL 184
            E  ++ + + +ML +V    G     C +    Q    +LPLSQ+G F+  E     TL
Sbjct: 119 TEGRVVTEDQLLMLEAVVMHLGIRSARCVLGMEGQQVILHLPLSQKGPFWTWEPSAPRTL 178

Query: 185 KEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVM 235
            ++++    K+    + LT  +  W S           LIL+P YEIQ +M
Sbjct: 179 LQVLQDPALKD----LVLTCPTLPWHS-----------LILRPQYEIQAIM 214


>gi|87080817 basement membrane-induced gene isoform 2 [Homo sapiens]
          Length = 123

 Score = 79.7 bits (195), Expect = 8e-15
 Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 8/106 (7%)

Query: 5   LEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEIC 64
           L++FV +LD  +LPRVL + +G+Y EGSIYE+ GNECC STG++IK+T ++++K++    
Sbjct: 6   LQDFVRALDPASLPRVLRVCSGVYFEGSIYEISGNECCLSTGDLIKVTQVRLQKVVC--- 62

Query: 65  EQIEGCESLQPFELPMNFP--GLFKIVADKTPYLTMEEITRTIHIG 108
              E  ++ Q  EL  NF      +I A ++   T  E    +H G
Sbjct: 63  ---ENPKTSQTMELAPNFQVFSSLRIAATRSAAQTQGEDLARVHQG 105


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 37.0 bits (84), Expect = 0.056
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 500 ECWEIPVGRLNMTVQLVS-NFSRDAEPFLVRTLVEEITEEQYYMMRRYESSASHPPPRPP 558
           +CW++PV    M  + +  + S+D  P  +    E + E      RRY    + P P+P 
Sbjct: 813 DCWDLPVDYTKMKPRRIDEDESKDITPEDLDPFQEALEE------RRYPGEVTIPSPKP- 865

Query: 559 KHPSVEETKLTLLTLA 574
           K+P  +E+K  L+TL+
Sbjct: 866 KYPQCKESKKDLITLS 881


>gi|21489959 immunoglobulin J chain [Homo sapiens]
          Length = 159

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 558 PKHPSVEETKLTLLTLAEERTVDLPKSPKR-----HHVDITKKLHPNQAGLDSKVLIGSQ 612
           P    VE     ++ L     +  P SP R     H  D+ KK  P +  LD++++  +Q
Sbjct: 51  PNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELDNQIVTATQ 110

Query: 613 NDLVDEE 619
           +++ DE+
Sbjct: 111 SNICDED 117


>gi|242117996 hypothetical protein LOC392307 [Homo sapiens]
          Length = 402

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 246 PSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQSILQP-- 303
           PS D   +D+ +++ +  FL+  ++E   E  + E P+V    + P   H P++  +P  
Sbjct: 21  PSKDPSAEDLQENHISESFLKPSTSETPLEPHTSESPLVPSPSQIPLEAHSPETHQEPSI 80

Query: 304 GKTIVIHKKYQASRILASEIRSNFPKRHFLIP 335
            +T      Y+AS  L S I S  P++H  +P
Sbjct: 81  SETPSETPTYEAS--LDSPI-SVVPEKHLTLP 109


>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
          Length = 1074

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 554 PPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHV-DITKKLHPNQAGLDSKVLIGSQ 612
           P +PPK P +    +  ++ A  +T       ++H   +   K   N +  +S    G+Q
Sbjct: 321 PKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNTSSSNSSTR-GTQ 379

Query: 613 NDLVDEEKERSNRGATAIAETFKNEKHQK 641
           N L  E  + S  GA A A   +  KHQK
Sbjct: 380 NQLRCELCDVSCTGADAYAAHIRGAKHQK 408


>gi|38569394 inhibitor of kappa light polypeptide gene enhancer in
            B-cells, kinase complex-associated protein [Homo sapiens]
          Length = 1332

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query: 561  PSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQAGLDSKVLIGSQNDLVDE 618
            PS+ E +   +   + +T    +  KR  V    K    QAGLD +V  G ++DL  E
Sbjct: 1111 PSILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGLDDEVPHGQESDLFSE 1168


>gi|5901962 MYST histone acetyltransferase 2 [Homo sapiens]
          Length = 611

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 508 RLNMTVQLVSNFSRDAEPFLVRTLVEEITEEQYYMMRRYESSASHPPPRPPKHPSVEETK 567
           R+  +   +S  S+D+ P  VR L    TEE  Y  RR   S   P P  PK   + +T+
Sbjct: 41  RVTRSSARLSQSSQDSSP--VRNLQSFGTEEPAYSTRRVTRSQQQPTPVTPKKYPLRQTR 98


>gi|196114999 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 522 DAEPFLVRTLVEEITEEQYYMMRRYESSASHPPPRPPKHP 561
           D  P ++    E+I ++Q    ++ +   + PPP+P + P
Sbjct: 579 DRPPHIIHVPAEQIQQQQQQQQQQQQQQQAPPPPQPQQQP 618


>gi|4506791 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 522 DAEPFLVRTLVEEITEEQYYMMRRYESSASHPPPRPPKHP 561
           D  P ++    E+I ++Q    ++ +   + PPP+P + P
Sbjct: 579 DRPPHIIHVPAEQIQQQQQQQQQQQQQQQAPPPPQPQQQP 618


>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
          Length = 466

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 15/104 (14%)

Query: 27  IYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEICEQIEGCESLQPFELPMNFPGLF 86
           +YL+ ++     N       E + +    ++KI     E +EGCE L   +L +NF G  
Sbjct: 49  LYLQNNLIGKIENVSKLKKLEYLNLALNNIEKI-----ENLEGCEELAKLDLTVNFIGEL 103

Query: 87  KIVADKTPYLTMEEITRTIHIGPSRLGHPC--FYHQKDIKLENL 128
             + +    + ++E+          +G+PC  F H ++  +  L
Sbjct: 104 SSIKNLQHNIHLKEL--------FLMGNPCASFDHYREFVVATL 139


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 11/94 (11%)

Query: 552  HPPP----RPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQAGLDSKV 607
            HPPP    +PP+HP  E+ +       +ER V    + +   ++  ++    +     KV
Sbjct: 1118 HPPPPPPVQPPQHPRAEQRE-------QERAVREQWAEREREMERRERTRSEREWDRDKV 1170

Query: 608  LIGSQNDLVDEEKERSNRGATAIAETFKNEKHQK 641
              G ++     ++ R  R  +   ++ K EK Q+
Sbjct: 1171 REGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQE 1204


>gi|239757898 PREDICTED: similar to testis expressed sequence 13A
           [Homo sapiens]
          Length = 652

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 552 HPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHH 589
           HPPP P K PS+      ++T AE   V L   P   H
Sbjct: 229 HPPPFPMKFPSLPPLPPAVVTGAEAAAVPLQMPPTEIH 266


>gi|239752412 PREDICTED: similar to testis expressed sequence 13A
           [Homo sapiens]
          Length = 652

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 552 HPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHH 589
           HPPP P K PS+      ++T AE   V L   P   H
Sbjct: 229 HPPPFPMKFPSLPPLPPAVVTGAEAAAVPLQMPPTEIH 266


>gi|169216868 PREDICTED: similar to testis expressed sequence 13A
           [Homo sapiens]
          Length = 714

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)

Query: 552 HPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHH 589
           HPPP P K PS+      ++T AE   V L   P   H
Sbjct: 229 HPPPFPMKFPSLPPLPPAVVTGAEAAAVPLQMPPTEIH 266


>gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
          Length = 162

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 382 SVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS--YEAALLPLYMEGGFVEVIH 439
           ++ VGD ++VH +  +EV   G   V++ L  + I+KK   Y+ A    Y     V   H
Sbjct: 25  AIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQ----VNNKH 80

Query: 440 DKKQYPI 446
           D K  P+
Sbjct: 81  DDKYSPL 87


>gi|189571618 HRAS-like suppressor 3 [Homo sapiens]
          Length = 162

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 382 SVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKS--YEAALLPLYMEGGFVEVIH 439
           ++ VGD ++VH +  +EV   G   V++ L  + I+KK   Y+ A    Y     V   H
Sbjct: 25  AIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQ----VNNKH 80

Query: 440 DKKQYPI 446
           D K  P+
Sbjct: 81  DDKYSPL 87


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,832,134
Number of Sequences: 37866
Number of extensions: 1145470
Number of successful extensions: 3843
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3819
Number of HSP's gapped (non-prelim): 21
length of query: 641
length of database: 18,247,518
effective HSP length: 109
effective length of query: 532
effective length of database: 14,120,124
effective search space: 7511905968
effective search space used: 7511905968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.