Search of human proteins with 58197560

Search of human proteins with 58197560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58197560 benzodiazapine receptor (peripheral)-like 1 [Homo
sapiens]
         (170 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|229577236 benzodiazapine receptor (peripheral)-like 1 [Homo s...   358   e-100
gi|58197560 benzodiazapine receptor (peripheral)-like 1 [Homo sa...   358   e-100
gi|74275350 translocator protein isoform PBR [Homo sapiens]           115   2e-26
gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens]        32   0.26 
gi|9789897 leukotriene B4 receptor 2 [Homo sapiens]                    30   0.77 
gi|14249528 solute carrier family 35, member B4 [Homo sapiens]         30   1.3  
gi|21361649 osteoblast differentiation promoting factor protein ...    29   1.7  
gi|110835708 solute carrier family 5 (inositol transporters), me...    28   3.8  
gi|170932464 Yip1 interacting factor homolog [Homo sapiens]            28   3.8  
gi|24497587 adenylate cyclase 4 [Homo sapiens]                         28   3.8  
gi|197276623 solute carrier family 6 (neurotransmitter transport...    28   5.0  
gi|54607094 solute carrier family 6 (neurotransmitter transporte...    28   5.0  
gi|4504537 5-hydroxytryptamine (serotonin) receptor 1E [Homo sap...    28   5.0  
gi|145046269 rotatin [Homo sapiens]                                    28   5.0  
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]       27   6.5  
gi|38348402 transmembrane protein 110 [Homo sapiens]                   27   6.5  
gi|13129032 hypothetical protein LOC79025 [Homo sapiens]               27   6.5  
gi|109255241 natural resistance-associated macrophage protein 1 ...    27   8.5  

>gi|229577236 benzodiazapine receptor (peripheral)-like 1 [Homo
           sapiens]
          Length = 170

 Score =  358 bits (920), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA 60
           MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA
Sbjct: 1   MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA 60

Query: 61  SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST 120
           SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST
Sbjct: 61  SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST 120

Query: 121 ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD 170
           ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD
Sbjct: 121 ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD 170


>gi|58197560 benzodiazapine receptor (peripheral)-like 1 [Homo
           sapiens]
          Length = 170

 Score =  358 bits (920), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA 60
           MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA
Sbjct: 1   MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYA 60

Query: 61  SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST 120
           SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST
Sbjct: 61  SYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVST 120

Query: 121 ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD 170
           ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD
Sbjct: 121 ALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQPQPTEKSD 170


>gi|74275350 translocator protein isoform PBR [Homo sapiens]
          Length = 169

 Score =  115 bits (288), Expect = 2e-26
 Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 8   FVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLVWKD 67
           F L P LG  +   F       W  G +  SW P + VL  V   +YS +GY SYLVWK+
Sbjct: 11  FTLAPSLGCFVGSRFVHGEGLRWYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKE 70

Query: 68  LGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVSTALIWHPI 127
           LGG       +PLGLY  QL ++W    +FF     G AL+ LLL+ G   +T + W+ +
Sbjct: 71  LGG-FTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQV 129

Query: 128 NKLAALLLLPYLAWLTVTSALTYHLWRDS 156
           + LAA LL PYLAWL  T+ L Y +WRD+
Sbjct: 130 SPLAARLLYPYLAWLAFTTTLNYCVWRDN 158


>gi|46409316 zinc finger, DHHC-type containing 24 [Homo sapiens]
          Length = 284

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 96  LFFTVHNPGLALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLT 143
           L   +H  G+ LLH+ +L G  +S  L  H    +AALLLLP+L  LT
Sbjct: 140 LCLLLHAAGV-LLHVSVLLGPALSALLRAHTPLHMAALLLLPWLMLLT 186


>gi|9789897 leukotriene B4 receptor 2 [Homo sapiens]
          Length = 389

 Score = 30.4 bits (67), Expect = 0.77
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 133 LLLLPYLA--WLTVTSALTYHLWRDSLCPVHQPQP 165
           LLL  +LA   L V +A+  HLWRD +C +  P P
Sbjct: 172 LLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSP 206


>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
          Length = 331

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 48  LVQTAIYSVVGYASYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLAL 107
           +V  A +  +    +L   DLG     P A+P+  YA+ +T+ +TV V+     N  +A+
Sbjct: 34  IVTFAQFLFIAVEGFLFEADLGRK---PPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAM 90

Query: 108 -LHLLLLYGLVVSTALI 123
            LH++   G +++  ++
Sbjct: 91  PLHMIFRSGSLIANMIL 107


>gi|21361649 osteoblast differentiation promoting factor protein
           [Homo sapiens]
          Length = 539

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 78  LPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVV 118
           L +G  A    ++W V   F+ +H  G  +L LLL +G+V+
Sbjct: 160 LHIGAAAGIALLAWPVADTFYRIHRRGPKILLLLLFFGVVL 200


>gi|110835708 solute carrier family 5 (inositol transporters),
           member 3 [Homo sapiens]
          Length = 718

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 25/173 (14%)

Query: 8   FVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLVWKD 67
           F+L+  +G   +W   R  +SG+    R ++W      L +        +G A       
Sbjct: 17  FILVMCIGFFAMWKSNRSTVSGYFLAGRSMTWVTIGASLFVSNIGSEHFIGLAGSGAASG 76

Query: 68  LGGG------------LGW---PLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLL 112
              G            LGW   P+ +  G+Y +   +S         V+   L+L+  + 
Sbjct: 77  FAVGAWEFNALLLLQLLGWVFIPIYIRSGVYTMPEYLSKRFGGHRIQVYFAALSLILYIF 136

Query: 113 ------LY--GLVVSTALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSL 157
                 LY   L +  +L W+    ++ +LL+   A LTVT  L   ++ D+L
Sbjct: 137 TKLSVDLYSGALFIQESLGWNLY--VSVILLIGMTALLTVTGGLVAVIYTDTL 187


>gi|170932464 Yip1 interacting factor homolog [Homo sapiens]
          Length = 293

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 115 GLVVSTALIWHPINKLAALLLLPYLAWLTVTSAL-TYHL 152
           GL  STAL+W  + ++ ALLL  YLA  TV S L T+HL
Sbjct: 169 GLCASTALVW-VVMEVLALLLGLYLA--TVRSDLSTFHL 204


>gi|24497587 adenylate cyclase 4 [Homo sapiens]
          Length = 1077

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 17  ILVWLFTRDHMSGWCEGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLV 64
           IL   F+ D M    +GP+ML W P    L+  +  +   +G A+ L+
Sbjct: 626 ILFVCFSEDLMRCVLKGPKMLHWLPALSGLVATRPGLRIALGTATILL 673


>gi|197276623 solute carrier family 6 (neurotransmitter transporter,
           taurine), member 6 isoform a [Homo sapiens]
          Length = 620

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 19/109 (17%)

Query: 17  ILVWLFTRDH-------MSGWCEGPRM-LSWCPFYKVLLLVQTAIYSVVGYASYL----- 63
           ++ W++  D+       M G+  GP M  SW     VL  V   I+S+V Y         
Sbjct: 478 VIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPVLC-VGCFIFSLVKYVPLTYNKTY 536

Query: 64  VWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLL 112
           V+ +   GLGW LAL     +  L +   +++       P L  +  LL
Sbjct: 537 VYPNWAIGLGWSLAL-----SSMLCVPLVIVIRLCQTEGPFLVRVKYLL 580


>gi|54607094 solute carrier family 6 (neurotransmitter transporter,
           taurine), member 6 isoform a [Homo sapiens]
          Length = 620

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 19/109 (17%)

Query: 17  ILVWLFTRDH-------MSGWCEGPRM-LSWCPFYKVLLLVQTAIYSVVGYASYL----- 63
           ++ W++  D+       M G+  GP M  SW     VL  V   I+S+V Y         
Sbjct: 478 VIAWIYGGDNLYDGIEDMIGYRPGPWMKYSWAVITPVLC-VGCFIFSLVKYVPLTYNKTY 536

Query: 64  VWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPGLALLHLLL 112
           V+ +   GLGW LAL     +  L +   +++       P L  +  LL
Sbjct: 537 VYPNWAIGLGWSLAL-----SSMLCVPLVIVIRLCQTEGPFLVRVKYLL 580


>gi|4504537 5-hydroxytryptamine (serotonin) receptor 1E [Homo
           sapiens]
          Length = 365

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 33  GPRMLSWCPFYKVLLLVQTAIYSVVG-YASYLVW 65
           G  +LSW PF+   L+V  +IY+V    A +L W
Sbjct: 298 GAFILSWLPFFIKELIVGLSIYTVSSEVADFLTW 331


>gi|145046269 rotatin [Homo sapiens]
          Length = 2226

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 107 LLHLLLLYGLVVSTALIWHP---INKLAALLLLPYLAWLTVTSALTYHLWRDSLCPV 160
           LLH  +LY   +S   I  P   +N  A  +LL  L    + +ALT++ + +SLCPV
Sbjct: 665 LLHPKVLYE--ISVFGIQEPESEVNTAAKAILLYLLQGRLMMTALTWNKFIESLCPV 719


>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
          Length = 857

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 103 PGLALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLTVTS 146
           PGL +L  L + GL+  T+  WHP+   A + L   L    + S
Sbjct: 541 PGLDVLIYLKITGLLFPTSDFWHPVVTPALVCLSQLLTKCPILS 584


>gi|38348402 transmembrane protein 110 [Homo sapiens]
          Length = 294

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 82  LYAVQLTISWTVLVLFFTVHNPGLALLHLLLLYGLVVSTALIW 124
           ++ V L + W  + L   + NP L L  ++L+    V+  + W
Sbjct: 169 VFIVLLILQWKKVALLNPIENPDLKLAIVMLIVPFFVNALMFW 211


>gi|13129032 hypothetical protein LOC79025 [Homo sapiens]
          Length = 318

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 145 TSALTYHLWRDSLCPVHQPQPTE 167
           TS L Y  WRDSL    +P+P E
Sbjct: 288 TSTLVYEPWRDSLTLHTKPEPLE 310


>gi|109255241 natural resistance-associated macrophage protein 1
           [Homo sapiens]
          Length = 550

 Score = 26.9 bits (58), Expect = 8.5
 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 21/143 (14%)

Query: 32  EGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLVWKDLGG-----GLGWPLALPLGLYAVQ 86
           EG   L W  F +VLL    AI   V  A +   +DL G      +   L LP  +  + 
Sbjct: 388 EGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPIL 447

Query: 87  LTISWTVLVLFF-------TVHNPGLALLHLLLLYGLVVSTALIWHPIN-KLAALLLLPY 138
              S   L+  F        V +  + L+  + LY +V     + HP    LAALL   Y
Sbjct: 448 TFTSMPTLMQEFANGLLNKVVTSSIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAY 507

Query: 139 LAWLTVTSALTYHLWRDSLCPVH 161
           L         TY +W  + C  H
Sbjct: 508 L------GLSTYLVW--TCCLAH 522


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.144    0.498 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,831,282
Number of Sequences: 37866
Number of extensions: 265164
Number of successful extensions: 678
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 665
Number of HSP's gapped (non-prelim): 19
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.