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Search of human proteins with 5803227
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide [Homo sapiens]
(245 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 484 e-137
gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 398 e-111
gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation p... 398 e-111
gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation p... 398 e-111
gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation p... 398 e-111
gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation p... 398 e-111
gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation pr... 398 e-111
gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 398 e-111
gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 398 e-111
gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 340 9e-94
gi|5454052 stratifin [Homo sapiens] 337 7e-93
gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 336 1e-92
gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 308 4e-84
gi|207452735 epiplakin 1 [Homo sapiens] 36 0.035
gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens] 34 0.10
gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens] 34 0.10
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 34 0.10
gi|38044112 restin isoform b [Homo sapiens] 31 1.1
gi|4506751 restin isoform a [Homo sapiens] 31 1.1
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 31 1.1
gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens] 30 1.5
gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens] 30 1.5
gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens] 30 1.5
gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens] 30 1.5
gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens] 30 1.5
gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens] 30 1.5
gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens] 30 1.5
gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens] 30 1.5
gi|40807469 TRAF interacting protein [Homo sapiens] 30 1.5
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 30 2.5
>gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide [Homo sapiens]
Length = 245
Score = 484 bits (1246), Expect = e-137
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK
Sbjct: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA
Sbjct: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
Query: 241 EGAEN 245
EGAEN
Sbjct: 241 EGAEN 245
>gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 398 bits (1023), Expect = e-111
Identities = 198/242 (81%), Positives = 222/242 (91%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS++ G+E DA
Sbjct: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
Query: 241 EG 242
EG
Sbjct: 243 EG 244
>gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 398 bits (1023), Expect = e-111
Identities = 195/245 (79%), Positives = 222/245 (90%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K EL+QKAKLAEQAERYDDMA CMK+VTEQGAELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
V+SSIEQKT+ ++KK Q+ ++YREK+E+ELR IC VL LL+K+LI NA+ ESKVFYLK
Sbjct: 61 VVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLK 120
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDY+RYLAEVA GDD+K +D SQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 180
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD+ G+E +A
Sbjct: 181 ILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAG 240
Query: 241 EGAEN 245
EG EN
Sbjct: 241 EGGEN 245
>gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 398 bits (1023), Expect = e-111
Identities = 198/242 (81%), Positives = 222/242 (91%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
M+K+EL+QKAKLAEQAERYDDMA MKAVTEQG ELSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
VISSIEQKT+ ++KK Q+ K+YREK+E+EL+ IC VLELLDKYLI NAT PESKVFYLK
Sbjct: 63 VISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 122
Query: 121 MKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYE 180
MKGDYFRYL+EVA GD+++ T+ NSQ AYQEAF+ISKKEMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE 182
Query: 181 ILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAA 240
ILN+PE AC+LAKTAFDEAIAELDTLNE+SYKDSTLIMQLLRDNLTLWTS++ G+E DA
Sbjct: 183 ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 242
Query: 241 EG 242
EG
Sbjct: 243 EG 244
>gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, eta polypeptide [Homo sapiens]
Length = 246
Score = 340 bits (871), Expect = 9e-94
Identities = 175/245 (71%), Positives = 204/245 (83%), Gaps = 6/245 (2%)
Query: 2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRV 61
++ +L+Q+A+LAEQAERYDDMA+ MKAVTE LSNE+RNLLSVAYKNVVG RRS+WRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 62 ISSIEQKT--DTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATN--PESKVF 117
ISSIEQKT D ++KKL+ +K YREK+E EL ++C VL LLDK+LI N + ESKVF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVF 122
Query: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVF 177
YLKMKGDY+RYLAEVA G+ + ++ S+ AY+EAF+ISK++MQPTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVF 182
Query: 178 YYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEEC 237
YYEI N PE AC LAK AFD+AIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD EE
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEE- 241
Query: 238 DAAEG 242
A EG
Sbjct: 242 -AGEG 245
>gi|5454052 stratifin [Homo sapiens]
Length = 248
Score = 337 bits (863), Expect = 7e-93
Identities = 171/238 (71%), Positives = 205/238 (86%), Gaps = 2/238 (0%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ LIQKAKLAEQAERY+DMA MK E+G ELS EERNLLSVAYKNVVGG+R+AWR
Sbjct: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 61 VISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFY 118
V+SSIEQK++ S++K +++YREKVE+EL+ +C TVL LLD +LI A + ES+VFY
Sbjct: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
Query: 119 LKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFY 178
LKMKGDY+RYLAEVA GDD+K+ ID+++ AYQEA DISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
Query: 179 YEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236
YEI N+PE A +LAKT FDEA+A+L TL+EDSYKDSTLIMQLLRDNLTLWT+D+AGEE
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEE 238
>gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, gamma polypeptide [Homo sapiens]
Length = 247
Score = 336 bits (862), Expect = 1e-92
Identities = 173/246 (70%), Positives = 202/246 (82%), Gaps = 6/246 (2%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
+++ +L+QKA+LAEQAERYDDMA MK VTE LSNEERNLLSVAYKNVVG RRS+WR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 61 VISSIEQKT--DTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANA--TNPESKV 116
VISSIEQKT D ++KK+++++ YREK+E EL ++C VL LLD YLI N T ESKV
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 117 FYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSV 176
FYLKMKGDY+RYLAEVA G+ R +++S+ AY EA +ISK+ MQPTHPIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 177 FYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236
FYYEI N PE AC LAKTAFD+AIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD ++
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ--QD 239
Query: 237 CDAAEG 242
D EG
Sbjct: 240 DDGGEG 245
>gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, epsilon polypeptide [Homo sapiens]
Length = 255
Score = 308 bits (788), Expect = 4e-84
Identities = 154/236 (65%), Positives = 190/236 (80%), Gaps = 2/236 (0%)
Query: 2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRV 61
++ +L+ +AKLAEQAERYD+M MK V EL+ EERNLLSVAYKNV+G RR++WR+
Sbjct: 3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 62
Query: 62 ISSIEQKTDTS--DKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYL 119
ISSIEQK + + KL++I++YR+ VE+EL+ IC +L++LDK+LI A ESKVFY
Sbjct: 63 ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYY 122
Query: 120 KMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYY 179
KMKGDY RYLAE A G+DRK+ +NS AY+ A DI+ E+ PTHPIRLGLALNFSVFYY
Sbjct: 123 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 182
Query: 180 EILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGE 235
EILN+P+ AC LAK AFD+AIAELDTL+E+SYKDSTLIMQLLRDNLTLWTSD G+
Sbjct: 183 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGD 238
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 35.8 bits (81), Expect = 0.035
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 5 ELIQKAKLAEQAERYDDMATCMKAVTEQGAE---LSNEERNLLSVAYKNVVGGR-----R 56
E + +L E+ +D + V + + + +E R L + GR
Sbjct: 2061 EKVSYRELQERCRPQEDTGWVLFPVNKAARDSEHIDDETRRALEAEQVEITVGRFRGQKP 2120
Query: 57 SAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIAN 108
+ W +++S + T +KKLQL++ YR L+++ +LEL++K +N
Sbjct: 2121 TLWALLNS---EYVTEEKKLQLVRMYRTHTRRALQTVAQLILELIEKQETSN 2169
Score = 28.9 bits (63), Expect = 4.3
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 43 LLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREK 85
LLSV Y G R SAW +I+S + + ++ QL++ YR++
Sbjct: 818 LLSVKYGRFQGQRVSAWELINS---EYFSEGRRRQLLRRYRQR 857
>gi|114155148 tropomyosin 3 isoform 5 [Homo sapiens]
Length = 247
Score = 34.3 bits (77), Expect = 0.10
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MEKTELIQKAKLAEQAER-YDDMATCMKAV------TEQGAELSNEERNLLSVAYKNVVG 53
+++ +L + +AE+A+R Y+++A + + TE+ AEL+ + + L KNV
Sbjct: 107 LQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTN 166
Query: 54 GRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVES 88
+S QK D +++++++ D ++ E+
Sbjct: 167 NLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAET 201
>gi|114155144 tropomyosin 3 isoform 4 [Homo sapiens]
Length = 248
Score = 34.3 bits (77), Expect = 0.10
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MEKTELIQKAKLAEQAER-YDDMATCMKAV------TEQGAELSNEERNLLSVAYKNVVG 53
+++ +L + +AE+A+R Y+++A + + TE+ AEL+ + + L KNV
Sbjct: 107 LQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTN 166
Query: 54 GRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVES 88
+S QK D +++++++ D ++ E+
Sbjct: 167 NLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAET 201
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 34.3 bits (77), Expect = 0.10
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MEKTELIQKAKLAEQAER-YDDMATCMKAV------TEQGAELSNEERNLLSVAYKNVVG 53
+++ +L + +AE+A+R Y+++A + + TE+ AEL+ + + L KNV
Sbjct: 144 LQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTN 203
Query: 54 GRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVES 88
+S QK D +++++++ D ++ E+
Sbjct: 204 NLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAET 238
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 60 RVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYL 119
R +S +E+K +TS + Q +K E+ SE ++ +L+ L K L+ + E K+
Sbjct: 960 RKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLL----DTEDKLKGA 1015
Query: 120 KMKGD-YFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPI------------ 166
+ + + L E+ D+ + ++ A Q ++K++ + +
Sbjct: 1016 REENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQN 1075
Query: 167 RLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLT 226
L ++ E LN + T+ +E E++TL + + + S + L +N+
Sbjct: 1076 ELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVK 1135
Query: 227 L 227
L
Sbjct: 1136 L 1136
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 60 RVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYL 119
R +S +E+K +TS + Q +K E+ SE ++ +L+ L K L+ + E K+
Sbjct: 995 RKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLL----DTEDKLKGA 1050
Query: 120 KMKGD-YFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPI------------ 166
+ + + L E+ D+ + ++ A Q ++K++ + +
Sbjct: 1051 REENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQN 1110
Query: 167 RLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLT 226
L ++ E LN + T+ +E E++TL + + + S + L +N+
Sbjct: 1111 ELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVK 1170
Query: 227 L 227
L
Sbjct: 1171 L 1171
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 30.8 bits (68), Expect = 1.1
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRV 61
EK +Q+ L++++ +A KA TE E ++E L V + N G S ++
Sbjct: 644 EKHTTLQEVSLSKES-----LAIQEKATTE---EEFSQELFSLHVKHTNKSG---SLFQE 692
Query: 62 ISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPES------- 114
+++KTD + L+ + +EK E S+ +L L ++ ATN ++
Sbjct: 693 ALVLQEKTDAEEDSLKNLLALQEKSTMEEESLINKLLALKEELSAEAATNIQTQLSLKKK 752
Query: 115 -----KVFYLK 120
KVF+LK
Sbjct: 753 STSHGKVFFLK 763
>gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 251 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 296
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 297 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 356
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 357 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 399
>gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 440 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 482
>gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 440 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 482
>gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 251 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 296
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 297 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 356
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 357 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 399
>gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]
Length = 549
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 293 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 338
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 339 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 398
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 399 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 441
>gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]
Length = 548
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 292 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 337
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 338 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 397
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 398 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 440
>gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 440 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 482
>gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]
Length = 595
Score = 30.4 bits (67), Expect = 1.5
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ L ++ ++ E+AER D ++ A ++NE +
Sbjct: 334 MERQRLAREKQMREEAERTRDELERRLLQMKEEATMANE--------------ALMRSEE 379
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLK 120
+ +K ++++ +L+ + E E++ I T + ++ + E++V LK
Sbjct: 380 TADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALK 439
Query: 121 MKGDYFRYLAEV-ACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHP 165
M + R E D ++ + + A Q+ +I+ K PT+P
Sbjct: 440 MAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATK---PTYP 482
>gi|40807469 TRAF interacting protein [Homo sapiens]
Length = 469
Score = 30.4 bits (67), Expect = 1.5
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
ME+ EL+ +++ E E DM AV + + L Y+N+ R+++
Sbjct: 166 MEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVS-----LKKEYENLKEARKASGE 220
Query: 61 VISSIEQKTDTSDKKLQLIKDYREKVESELRS 92
V + + +S KLQ + ++ + EL+S
Sbjct: 221 VADKLRKDLFSSRSKLQTVYSELDQAKLELKS 252
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 29.6 bits (65), Expect = 2.5
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 1 MEKTELIQKAKLAEQAERYDDMATCMK--AVTEQGAELSNEERNLLSVAYKNVVGGRRSA 58
+ + EL K K+ E + + K A ++ E N E L Y++ +
Sbjct: 252 IREKELDMKTKMMEAKFHEEKLKLQQKHDADVQKILERKNNEIEELKTLYRSK---QHET 308
Query: 59 WRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLD 102
I +E+K T + Q+I++ +E +EL+ IC E L+
Sbjct: 309 EETIRKLEKKVQTLIRDCQVIRETKEDQIAELKKICEQSTESLN 352
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,902,755
Number of Sequences: 37866
Number of extensions: 301754
Number of successful extensions: 771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 741
Number of HSP's gapped (non-prelim): 49
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.