Guide to the Human Genome
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Name: SLC20A2 Sequence: fasta or formatted (652aa) NCBI GI: 5803173
Description:

solute carrier family 20, member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         65           2
 C cysteine            1.4          9           1
 D aspartate           3.5         23           2
 E glutamate           5.5         36           3
 F phenylalanine       5.1         33           2
 G glycine             9.2         60           2
 H histidine           2.1         14           1
 I isoleucine          6.4         42           2
 K lysine              4.1         27           2
 L leucine             9.8         64           2
 M methionine          2.3         15           1
 N asparagine          2.5         16           2
 P proline             4.3         28           1
 Q glutamine           1.7         11           1
 R arginine            3.8         25           2
 S serine              8.1         53           2
 T threonine           5.8         38           2
 V valine              9.4         61           2
 W tryptophan          2.1         14           1
 Y tyrosine            2.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 20, member 2 
SLC20A1               0.570   solute carrier family 20 (phosphate transporter), me...
CCDC114               0.011   coiled-coil domain containing 114 isoform 2 
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
MYT1                  0.008   myelin transcription factor 1 
NEFL                  0.006   neurofilament, light polypeptide 68kDa 
CDKL5                 0.005   cyclin-dependent kinase-like 5 
CDKL5                 0.005   cyclin-dependent kinase-like 5 
MYT1L                 0.005   myelin transcription factor 1-like 
SLC7A1                0.005   solute carrier family 7 (cationic amino acid transpor...
ADCY2                 0.005   adenylate cyclase 2 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform b 
SRRT                  0.005   arsenate resistance protein 2 isoform e 
SRRT                  0.005   arsenate resistance protein 2 isoform c 
GTF2F1                0.005   general transcription factor IIF, polypeptide 1, 74...
LOC728792             0.005   PREDICTED: hypothetical protein 
VEGFA                 0.004   vascular endothelial growth factor A isoform f precu...
VEGFA                 0.004   vascular endothelial growth factor A isoform e precu...
VEGFA                 0.004   vascular endothelial growth factor A isoform d precu...
VEGFA                 0.004   vascular endothelial growth factor A isoform c precu...
VEGFA                 0.004   vascular endothelial growth factor A isoform b precu...
VEGFA                 0.004   vascular endothelial growth factor A isoform a precu...
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.004   inhibitor of kappa light polypeptide gene enhancer ...
VEGFA                 0.004   vascular endothelial growth factor A isoform g precu...
TRIM28                0.004   tripartite motif-containing 28 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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