Search of human proteins with 56549673

Search of human proteins with 56549673

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56549673 solute carrier family 41, member 3 isoform 1 [Homo
sapiens]
         (507 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56549673 solute carrier family 41, member 3 isoform 1 [Homo s...  1002   0.0  
gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo s...   914   0.0  
gi|56549671 solute carrier family 41, member 3 isoform 2 [Homo s...   898   0.0  
gi|56549677 solute carrier family 41, member 3 isoform 4 [Homo s...   733   0.0  
gi|51702206 solute carrier family 41 member 1 [Homo sapiens]          449   e-126
gi|207444687 solute carrier family 41, member 2 [Homo sapiens]        400   e-111
gi|108796649 hypothetical protein LOC283677 [Homo sapiens]             33   0.80 
gi|4759162 SRY-box 14 [Homo sapiens]                                   32   1.0  
gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens neandert...    32   1.4  
gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]               32   1.4  
gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]     30   5.2  
gi|61742814 coiled-coil and C2 domain containing 1B [Homo sapiens]     30   6.8  
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo...    29   8.8  
gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo...    29   8.8  
gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo s...    29   8.8  
gi|194239697 solute carrier family 1 (glutamate transporter), me...    29   8.8  
gi|30581137 phosphatidylinositol glycan anchor biosynthesis, cla...    29   8.8  

>gi|56549673 solute carrier family 41, member 3 isoform 1 [Homo
           sapiens]
          Length = 507

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 507/507 (100%), Positives = 507/507 (100%)

Query: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60
           MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE
Sbjct: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60

Query: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL 120
           TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL
Sbjct: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL 120

Query: 121 ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 180
           ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK
Sbjct: 121 ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 180

Query: 181 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 240
           VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV
Sbjct: 181 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 240

Query: 241 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 300
           SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG
Sbjct: 241 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 300

Query: 301 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 360
           LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN
Sbjct: 301 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 360

Query: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 420
           PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT
Sbjct: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 420

Query: 421 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ 480
           ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ
Sbjct: 421 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ 480

Query: 481 PFICTQHLIVSLLSFYFPFCLLAKTSI 507
           PFICTQHLIVSLLSFYFPFCLLAKTSI
Sbjct: 481 PFICTQHLIVSLLSFYFPFCLLAKTSI 507


>gi|56549675 solute carrier family 41, member 3 isoform 3 [Homo
           sapiens]
          Length = 471

 Score =  914 bits (2361), Expect = 0.0
 Identities = 471/507 (92%), Positives = 471/507 (92%), Gaps = 36/507 (7%)

Query: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60
           MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE
Sbjct: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60

Query: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL 120
           TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQ                             
Sbjct: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQ----------------------------- 91

Query: 121 ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 180
                  ANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK
Sbjct: 92  -------ANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 144

Query: 181 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 240
           VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV
Sbjct: 145 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 204

Query: 241 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 300
           SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG
Sbjct: 205 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 264

Query: 301 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 360
           LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN
Sbjct: 265 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 324

Query: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 420
           PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT
Sbjct: 325 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 384

Query: 421 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ 480
           ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ
Sbjct: 385 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQ 444

Query: 481 PFICTQHLIVSLLSFYFPFCLLAKTSI 507
           PFICTQHLIVSLLSFYFPFCLLAKTSI
Sbjct: 445 PFICTQHLIVSLLSFYFPFCLLAKTSI 471


>gi|56549671 solute carrier family 41, member 3 isoform 2 [Homo
           sapiens]
          Length = 487

 Score =  898 bits (2320), Expect = 0.0
 Identities = 456/457 (99%), Positives = 457/457 (100%)

Query: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60
           MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE
Sbjct: 1   MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE 60

Query: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL 120
           TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL
Sbjct: 61  TAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTL 120

Query: 121 ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 180
           ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK
Sbjct: 121 ASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVAK 180

Query: 181 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 240
           VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV
Sbjct: 181 VELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALV 240

Query: 241 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 300
           SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG
Sbjct: 241 SSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGG 300

Query: 301 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 360
           LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN
Sbjct: 301 LILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPN 360

Query: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 420
           PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT
Sbjct: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVT 420

Query: 421 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 457
           ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLG+
Sbjct: 421 ILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGT 457



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 14/154 (9%)

Query: 98  EVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQE-QHRVISSNLALIQVQATV 156
           + K +    P + G+ GNL     SR+ST  +          Q +    N       + +
Sbjct: 311 QYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEI 370

Query: 157 VGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTA--FLAAFAL-GVLMVCIVIGARKL 213
             + A V  LLL VV    +    + L+   SV+ +  F+  + L G++ V I++   ++
Sbjct: 371 NSMSARV--LLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEV 428

Query: 214 GV--------NPDNIATPIAASLGDLITLSILAL 239
            V        +PDN   P    LGDL+   +LAL
Sbjct: 429 MVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLAL 462


>gi|56549677 solute carrier family 41, member 3 isoform 4 [Homo
           sapiens]
          Length = 461

 Score =  733 bits (1893), Expect = 0.0
 Identities = 376/398 (94%), Positives = 387/398 (97%)

Query: 60  ETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 119
           E+ ++I  QV VP + +GL +  AG++++  QHWPVFVEVKDLLTLVPPLVGLKGNLEMT
Sbjct: 34  ESFFTIMCQVVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMT 93

Query: 120 LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 179
           LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA
Sbjct: 94  LASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALLLGVVSREEVDVA 153

Query: 180 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 239
           KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL
Sbjct: 154 KVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAL 213

Query: 240 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 299
           VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG
Sbjct: 214 VSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGWFPIILAMVISSFG 273

Query: 300 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 359
           GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP
Sbjct: 274 GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWP 333

Query: 360 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 419
           NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV
Sbjct: 334 NPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQV 393

Query: 420 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGS 457
           TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLG+
Sbjct: 394 TILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGT 431



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 14/154 (9%)

Query: 98  EVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQE-QHRVISSNLALIQVQATV 156
           + K +    P + G+ GNL     SR+ST  +          Q +    N       + +
Sbjct: 285 QYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEI 344

Query: 157 VGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTA--FLAAFAL-GVLMVCIVIGARKL 213
             + A V  LLL VV    +    + L+   SV+ +  F+  + L G++ V I++   ++
Sbjct: 345 NSMSARV--LLLLVVPGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEV 402

Query: 214 GV--------NPDNIATPIAASLGDLITLSILAL 239
            V        +PDN   P    LGDL+   +LAL
Sbjct: 403 MVRLTWHQALDPDNHCIPYLTGLGDLLGTGLLAL 436


>gi|51702206 solute carrier family 41 member 1 [Homo sapiens]
          Length = 513

 Score =  449 bits (1154), Expect = e-126
 Identities = 236/432 (54%), Positives = 306/432 (70%), Gaps = 7/432 (1%)

Query: 33  VASEDGAL----RAPESQSVTPK--PLETEPSRETAWSIGLQVTVPFMFAGLGLSWAGML 86
           V  ED  L    ++ ES  V+    P    P +ET++SIGLQV  PF+ AG G   AGM+
Sbjct: 60  VREEDALLENGSQSNESDDVSTDRGPAPPSPLKETSFSIGLQVLFPFLLAGFGTVAAGMV 119

Query: 87  LDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSN 146
           LD  QHW VF +V ++  LVP L+GLKGNLEMTLASRLSTAAN G +D P+E  R+I+ N
Sbjct: 120 LDIVQHWEVFQKVTEVFILVPALLGLKGNLEMTLASRLSTAANIGHMDTPKELWRMITGN 179

Query: 147 LALIQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCI 206
           +ALIQVQATVVG LA++AA++ G +      +    LLCASSV TAF+A+  LG++M+ +
Sbjct: 180 MALIQVQATVVGFLASIAAVVFGWIPDGHFSIPHAFLLCASSVATAFIASLVLGMIMIGV 239

Query: 207 VIGARKLGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDS-RYLTPLVCLSFAALT 265
           +IG+RK+G+NPDN+ATPIAASLGDLITL++L+ +S   Y   +  RY+ PLVC  F AL 
Sbjct: 240 IIGSRKIGINPDNVATPIAASLGDLITLALLSGISWGLYLELNHWRYIYPLVCAFFVALL 299

Query: 266 PVWVLIAKQSPPIVKILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGV 325
           PVWV++A++SP   ++L  GW P+I+AM ISS GGLIL KTVS   + GMA+FTPVI GV
Sbjct: 300 PVWVVLARRSPATREVLYSGWEPVIIAMAISSVGGLILDKTVSDPNFAGMAVFTPVINGV 359

Query: 326 GGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPG 385
           GGNLVA+Q SRIST+LHM   PG    Q  +  P+PC+TF + ++NS SARVL LLVVPG
Sbjct: 360 GGNLVAVQASRISTFLHMNGMPGENSEQAPRRCPSPCTTFFSPDVNSRSARVLFLLVVPG 419

Query: 386 HLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCI 445
           HL+F Y I  ++G     +  F++ Y+ A L+QV ILLY+A+ MV   W + LDPDN  I
Sbjct: 420 HLVFLYTISCMQGGHTTLTLIFIIFYMTAALLQVLILLYIADWMVHWMWGRGLDPDNFSI 479

Query: 446 PYLTGLGDLLGS 457
           PYLT LGDLLG+
Sbjct: 480 PYLTALGDLLGT 491



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 17/192 (8%)

Query: 58  SRETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLE 117
           +RE  +S    V +    + +G    G++LD     P F     +    P + G+ GNL 
Sbjct: 312 TREVLYSGWEPVIIAMAISSVG----GLILDKTVSDPNFA---GMAVFTPVINGVGGNLV 364

Query: 118 MTLASRLSTAANTGQI---DDPQEQHRVISSNLALIQVQ-----ATVVGLLAAVAALL-L 168
              ASR+ST  +   +   +  Q   R  S              A V+ LL     L+ L
Sbjct: 365 AVQASRISTFLHMNGMPGENSEQAPRRCPSPCTTFFSPDVNSRSARVLFLLVVPGHLVFL 424

Query: 169 GVVSREEVDVAKVELLCASSVLTA-FLAAFALGVLMVCIVIGARKLGVNPDNIATPIAAS 227
             +S  +     + L+     +TA  L    L  +   +V      G++PDN + P   +
Sbjct: 425 YTISCMQGGHTTLTLIFIIFYMTAALLQVLILLYIADWMVHWMWGRGLDPDNFSIPYLTA 484

Query: 228 LGDLITLSILAL 239
           LGDL+   +LAL
Sbjct: 485 LGDLLGTGLLAL 496


>gi|207444687 solute carrier family 41, member 2 [Homo sapiens]
          Length = 573

 Score =  400 bits (1027), Expect = e-111
 Identities = 216/412 (52%), Positives = 287/412 (69%), Gaps = 7/412 (1%)

Query: 48  VTPKPLETEPSRETAWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVP 107
           VTPK       +E++  + LQ+ VPF+ AG G   AGM+LD  QHW VF +V ++  LVP
Sbjct: 147 VTPKL-----PKESSGIMALQILVPFLLAGFGTVSAGMVLDIVQHWEVFRKVTEVFILVP 201

Query: 108 PLVGLKGNLEMTLASRLSTAANTGQIDDPQEQHRVISSNLALIQVQATVVGLLAAVAALL 167
            L+GLKGNLEMTLASRLSTA N G++D P E+  +I  NLAL QVQATVVG LAAVAA++
Sbjct: 202 ALLGLKGNLEMTLASRLSTAVNIGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAII 261

Query: 168 LGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDNIATPIAAS 227
           LG +   +  +    LLC+SSV TAF+A+   G++MV +++G++K G+NPDN+ATPIAAS
Sbjct: 262 LGWIPEGKYYLDHSILLCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAAS 321

Query: 228 LGDLITLSILALVSSFFYRHKDS-RYLTPLVCLSFAALTPVWVLIAKQSPPIVKILKFGW 286
            GDLITL+ILA +S   Y   ++  Y++PLV + F ALTP+W++IA + P    +L  GW
Sbjct: 322 FGDLITLAILAWISQGLYSCLETYYYISPLVGVFFLALTPIWIIIAAKHPATRTVLHSGW 381

Query: 287 FPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSA 346
            P+I AMVISS GGLIL  TVS     G+ ++TPVI G+GGNLVAIQ SRISTYLH+ S 
Sbjct: 382 EPVITAMVISSIGGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSI 441

Query: 347 PGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQT 406
           PG LP + K  +  P  TF    +N+ SA+VLLLLV+PGHLIF Y I+L++      +  
Sbjct: 442 PGELPDEPKGCY-YPFRTFFGPGVNNKSAQVLLLLVIPGHLIFLYTIHLMKSGHTSLTII 500

Query: 407 FVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLLGSS 458
           F+V+YL   ++QV  LL++A+ MV   W +  DPD+  IPYLT LGDLLG++
Sbjct: 501 FIVVYLFGAVLQVFTLLWIADWMVHHFWRKGKDPDSFSIPYLTALGDLLGTA 552



 Score = 33.5 bits (75), Expect = 0.47
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 12/183 (6%)

Query: 72  PFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTG 131
           P + A +  S  G++LD     P  V +   +   P + G+ GNL    ASR+ST  +  
Sbjct: 383 PVITAMVISSIGGLILDTTVSDPNLVGI---VVYTPVINGIGGNLVAIQASRISTYLHLH 439

Query: 132 QI-----DDPQEQHRVISSNLAL-IQVQATVVGLLAAVAALLLGVVSREEVDVAKVELLC 185
            I     D+P+  +    +     +  ++  V LL  +   L+ + +   +      L  
Sbjct: 440 SIPGELPDEPKGCYYPFRTFFGPGVNNKSAQVLLLLVIPGHLIFLYTIHLMKSGHTSLTI 499

Query: 186 ASSVLTAF---LAAFALGVLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILALVSS 242
              V+  F   L  F L  +   +V    + G +PD+ + P   +LGDL+  ++LAL   
Sbjct: 500 IFIVVYLFGAVLQVFTLLWIADWMVHHFWRKGKDPDSFSIPYLTALGDLLGTALLALSFH 559

Query: 243 FFY 245
           F +
Sbjct: 560 FLW 562


>gi|108796649 hypothetical protein LOC283677 [Homo sapiens]
          Length = 266

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 361 PCSTFCTSEINSMSARVLLLLVVPGHLIFFYIIYLVEGQSVINSQTFV 408
           PC T+   + N  S  ++L +V+ GH   F    L+EG S+I S+ ++
Sbjct: 48  PCPTWKVFDSNEESGYLVLTIVISGHFFIFQGQTLLEGFSLIGSKDWL 95


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 20  LGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLET-----EPSRETAWSIGLQVTVPFM 74
           LG   PL   GLPV + DG L APE       P        +P++ ++ +I     VP  
Sbjct: 99  LGDTDPLKAAGLPVGASDGLLSAPEKARAFLPPASAPYSLLDPAQFSSSAIQKMGEVPHT 158

Query: 75  FAGLGLSWAGML 86
            A   L +A  L
Sbjct: 159 LATGALPYASTL 170


>gi|196123580 NADH dehydrogenase subunit 2 [Homo sapiens
           neanderthalensis]
          Length = 347

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 28/119 (23%)

Query: 400 SVINSQTFVVL----YLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLL 455
           +++N   +++L    +LL  L   T  L L+    +LTW   L P       L  LG L 
Sbjct: 201 TILNLTIYIILTTTAFLLLNLNSSTTTLLLSRTWNKLTWLTPLIPST-----LLSLGGL- 254

Query: 456 GSSSVGHTAAVPRRCTASPGWGLIQPFICTQHLI-------VSLLSFYFPFCLLAKTSI 507
                      P      P W +I+ F     LI       ++LL+ YF   L+  TSI
Sbjct: 255 -----------PPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSI 302


>gi|251831108 NADH dehydrogenase subunit 2 [Homo sapiens]
          Length = 347

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 28/119 (23%)

Query: 400 SVINSQTFVVL----YLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLGDLL 455
           +++N   +++L    +LL  L   T  L L+    +LTW   L P       L  LG L 
Sbjct: 201 TILNLTIYIILTTTAFLLLNLNSSTTTLLLSRTWNKLTWLTPLIPST-----LLSLGGL- 254

Query: 456 GSSSVGHTAAVPRRCTASPGWGLIQPFICTQHLI-------VSLLSFYFPFCLLAKTSI 507
                      P      P W +I+ F     LI       ++LL+ YF   L+  TSI
Sbjct: 255 -----------PPLTGFLPKWAIIEEFTKNNSLIIPTIMATITLLNLYFYLRLIYSTSI 302


>gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]
          Length = 248

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 10  RLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRETAW---SIG 66
           +L   G PG  G P P    G P  S DG      S+    K L+TE +R   W   S+G
Sbjct: 75  KLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASER---KALQTEMARIKKWLTFSLG 131

Query: 67  LQV 69
            QV
Sbjct: 132 KQV 134


>gi|61742814 coiled-coil and C2 domain containing 1B [Homo sapiens]
          Length = 858

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 16  KPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETE 56
           K  E  +P P++ G  P+A ++ A R+PE+    P  LE++
Sbjct: 215 KINEDEIPPPVALGKRPLAPQEPANRSPETDPPAPPALESD 255


>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
            sapiens]
          Length = 1977

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 3    GTETRQRRLDSC-GKPGELGLPHPLSTGGLPVASEDG----ALRAPESQSVTPK------ 51
            GTE     L S  G PG+L     +S  G PV  EDG     +R      VTP+      
Sbjct: 1348 GTEPADFALPSSRGGPGKLSPRKGVSQTGTPVCEEDGDAGLGIRQGGKAPVTPRGRGRRG 1407

Query: 52   --PLETEPSRETA 62
              P  T  +RETA
Sbjct: 1408 RPPSRTTGTRETA 1420


>gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo
            sapiens]
          Length = 1975

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 3    GTETRQRRLDSC-GKPGELGLPHPLSTGGLPVASEDG----ALRAPESQSVTPK------ 51
            GTE     L S  G PG+L     +S  G PV  EDG     +R      VTP+      
Sbjct: 1348 GTEPADFALPSSRGGPGKLSPRKGVSQTGTPVCEEDGDAGLGIRQGGKAPVTPRGRGRRG 1407

Query: 52   --PLETEPSRETA 62
              P  T  +RETA
Sbjct: 1408 RPPSRTTGTRETA 1420


>gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo
            sapiens]
          Length = 1972

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 3    GTETRQRRLDSC-GKPGELGLPHPLSTGGLPVASEDG----ALRAPESQSVTPK------ 51
            GTE     L S  G PG+L     +S  G PV  EDG     +R      VTP+      
Sbjct: 1343 GTEPADFALPSSRGGPGKLSPRKGVSQTGTPVCEEDGDAGLGIRQGGKAPVTPRGRGRRG 1402

Query: 52   --PLETEPSRETA 62
              P  T  +RETA
Sbjct: 1403 RPPSRTTGTRETA 1415


>gi|194239697 solute carrier family 1 (glutamate transporter),
           member 7 [Homo sapiens]
          Length = 560

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 22/157 (14%)

Query: 103 LTLVPPLVGLKGNLEMTLASRLSTAANTGQIDDPQE---QHRVISSNLA--LIQVQATV- 156
           +T   P+V ++G L+  L + L+T++++  +    +   ++  I   +A  ++ V AT+ 
Sbjct: 319 ITKKNPIVFIRGILQALLIA-LATSSSSATLPITFKCLLENNHIDRRIARFVLPVGATIN 377

Query: 157 ---VGLLAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKL 213
                L  AVAA+ +  V+  E+D  ++  +  ++   +  AA      +V +VI    +
Sbjct: 378 MDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSV 437

Query: 214 GVNPDNIATPIAAS------------LGDLITLSILA 238
           G+  D+I   IA              LGD +   I+A
Sbjct: 438 GLPTDDITLIIAVDWALDRFRTMINVLGDALAAGIMA 474


>gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class
           Z [Homo sapiens]
          Length = 579

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 29/190 (15%)

Query: 160 LAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALGVLMVCIVIGARKLGVNPDN 219
           LA    LL GV+  + +  A   L           A+  +G+L     +GAR L  +P +
Sbjct: 318 LAVNGFLLFGVLHAQALQAAWQRLQ------VGLQASAQMGLLRA---LGARSLLSSPRS 368

Query: 220 IATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIAKQSPPIV 279
                      L+    LAL+S+F   H+++R+L PL       L P+ +L + Q+ P+ 
Sbjct: 369 YLL--------LLYFMPLALLSAF--SHQEARFLIPL-------LVPLVLLCSPQTQPVP 411

Query: 280 KILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRIST 339
                G   +  A+    FG L     V   +Y    +  PV+     +   + T     
Sbjct: 412 ---WKGTVVLFNALGALLFGCLHQGGLVPGLEYLEQVVHAPVLPSTPTHYTLLFTHTYMP 468

Query: 340 YLHMWSAPGV 349
             H+   PG+
Sbjct: 469 PRHLLHLPGL 478


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,457,195
Number of Sequences: 37866
Number of extensions: 803113
Number of successful extensions: 3367
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3330
Number of HSP's gapped (non-prelim): 24
length of query: 507
length of database: 18,247,518
effective HSP length: 107
effective length of query: 400
effective length of database: 14,195,856
effective search space: 5678342400
effective search space used: 5678342400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.