Guide to the Human Genome
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Name: SLC41A3 Sequence: fasta or formatted (487aa) NCBI GI: 56549671
Description:

solute carrier family 41, member 3 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [507aa] solute carrier family 41, member 3 isoform 1
alt prot [471aa] solute carrier family 41, member 3 isoform 3
alt prot [461aa] solute carrier family 41, member 3 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         40           2
 C cysteine            1.8          9           1
 D aspartate           3.1         15           2
 E glutamate           3.7         18           2
 F phenylalanine       4.1         20           2
 G glycine             7.8         38           2
 H histidine           1.6          8           1
 I isoleucine          6.2         30           2
 K lysine              3.5         17           2
 L leucine            16.0         78           4
 M methionine          2.3         11           1
 N asparagine          2.1         10           1
 P proline             6.2         30           2
 Q glutamine           3.7         18           2
 R arginine            2.9         14           2
 S serine              7.8         38           2
 T threonine           6.0         29           1
 V valine              9.2         45           2
 W tryptophan          1.8          9           1
 Y tyrosine            2.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 41, member 3 isoform 2 
SLC41A3               0.934   solute carrier family 41, member 3 isoform 1 
SLC41A3               0.839   solute carrier family 41, member 3 isoform 3 
SLC41A3               0.824   solute carrier family 41, member 3 isoform 4 
SLC41A1               0.471   solute carrier family 41 member 1 
SLC41A2               0.415   solute carrier family 41, member 2 
C15orf60              0.009   hypothetical protein LOC283677 
SOX14                 0.007   SRY-box 14 
MBL2                  0.005   soluble mannose-binding lectin precursor 
CC2D1B                0.005   coiled-coil and C2 domain containing 1B 
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 2 [Homo...
TP53BP1               0.004   tumor protein p53 binding protein 1 isoform 3 
SLC1A7                0.004   solute carrier family 1 (glutamate transporter), me...
PIGZ                  0.004   phosphatidylinositol glycan anchor biosynthesis, cla...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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