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Search of human proteins with 5453980
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
(504 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 1008 0.0
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 180 2e-45
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 174 2e-43
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ... 84 4e-16
gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b... 84 4e-16
gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens] 80 6e-15
gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo sa... 75 1e-13
gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precurso... 75 2e-13
gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform... 74 2e-13
gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform... 74 2e-13
gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ... 74 2e-13
gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ... 74 3e-13
gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo ... 74 3e-13
gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... 74 3e-13
gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... 74 3e-13
gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo sa... 73 5e-13
gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo sap... 72 9e-13
gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform... 72 9e-13
gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sap... 72 2e-12
gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo sap... 70 4e-12
gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform... 70 4e-12
gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo sap... 69 8e-12
gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... 68 2e-11
gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... 68 2e-11
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 67 3e-11
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 67 4e-11
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s... 66 8e-11
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s... 66 8e-11
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ... 64 4e-10
gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo s... 63 5e-10
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 1008 bits (2605), Expect = 0.0
Identities = 504/504 (100%), Positives = 504/504 (100%)
Query: 1 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQF 60
MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQF
Sbjct: 1 MVAPGSVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQF 60
Query: 61 HAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK 120
HAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK
Sbjct: 61 HAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK 120
Query: 121 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI 180
LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI
Sbjct: 121 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI 180
Query: 181 LEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHEL 240
LEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHEL
Sbjct: 181 LEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHEL 240
Query: 241 SLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS 300
SLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS
Sbjct: 241 SLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS 300
Query: 301 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI 360
IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI
Sbjct: 301 IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI 360
Query: 361 QDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ 420
QDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ
Sbjct: 361 QDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ 420
Query: 421 WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHR 480
WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHR
Sbjct: 421 WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHR 480
Query: 481 SWNSWQGFNPFSSGGPFRFKFHFN 504
SWNSWQGFNPFSSGGPFRFKFHFN
Sbjct: 481 SWNSWQGFNPFSSGGPFRFKFHFN 504
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 180 bits (457), Expect = 2e-45
Identities = 129/473 (27%), Positives = 220/473 (46%), Gaps = 11/473 (2%)
Query: 36 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLT 95
+ E E G A +A + + A+D P N Y RA + +G+ + AL D
Sbjct: 27 EAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQ 86
Query: 96 KVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQ 155
+ ++L F L+ G L G A F++ L+ +++ +AQ + ++ +
Sbjct: 87 QSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALEL---DHKNAQAQQEFKNANAVM 143
Query: 156 RLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAAS 215
A F D+ + +D+ LE + L+AEC G +A S
Sbjct: 144 EYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDIL 203
Query: 216 KLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESA 275
++ + N +A Y Y E ++ + L++ DH++ + K L E
Sbjct: 204 RMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDG 263
Query: 276 EELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 335
+ ++G Y A Y + +P+ + + SK K +AI C+ +++
Sbjct: 264 NKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKL 323
Query: 336 EPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDY 395
+ + A RA+ Y+ E Y+EA++DYE + E ++ ++ L+ AQ L++S+++DY
Sbjct: 324 DDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ-TEKTKEHKQLLKNAQLELRKSKRKDY 382
Query: 396 YKILGVKRNAKKQEIIKAYRKLALQWHPDNFQ--NEEEKKKAEKKFIDIAAAKEVLSDPE 453
YKILGV +NA + EI KAYRK AL HPD + E +K+ EKKF ++ A +LSDP+
Sbjct: 383 YKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPK 442
Query: 454 MRKKFDDGEDPLDAESQQGGGGNP---FHRSWNSWQGFNPFSSGGPFRFKFHF 503
+ ++D G+D LD E G +P F + GF+ F + GP F F F
Sbjct: 443 KKTRYDSGQD-LDEEGMNMGDFDPNNIFKAFFGGPGGFS-FEASGPGNFFFQF 493
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 174 bits (441), Expect = 2e-43
Identities = 123/441 (27%), Positives = 208/441 (47%), Gaps = 11/441 (2%)
Query: 68 PDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDD 127
P N Y RA + +G+ + AL D + ++L F L+ G L G A
Sbjct: 3 PKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRS 62
Query: 128 FKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWD 187
F++ L+ +++ +AQ + ++ + A F D+ + +D+ LE
Sbjct: 63 FQRALEL---DHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPAC 119
Query: 188 AELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 247
+ L+AEC G +A S ++ + N +A Y Y E ++ +
Sbjct: 120 HRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQ 179
Query: 248 CLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVR 307
L++ DH++ + K L E + ++G Y A Y + +P+ + +
Sbjct: 180 ALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAK 239
Query: 308 SKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQ 367
SK K +AI C+ ++++ + A RA+ Y+ E Y+EA++DYE
Sbjct: 240 LYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVY 299
Query: 368 EHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQ 427
+ E ++ ++ L+ AQ LK+S+++DYYKILGV +NA + EI KAYRK AL HPD
Sbjct: 300 Q-TEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHS 358
Query: 428 --NEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNP---FHRSW 482
+ E +K+ EKKF ++ A +LSDP+ + ++D G+D LD E G +P F +
Sbjct: 359 GASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQD-LDEEGMNMGDFDPNNIFKAFF 417
Query: 483 NSWQGFNPFSSGGPFRFKFHF 503
GF+ F + GP F F F
Sbjct: 418 GGPGGFS-FEASGPGNFFFQF 437
Score = 40.8 bits (94), Expect = 0.003
Identities = 43/236 (18%), Positives = 92/236 (38%), Gaps = 18/236 (7%)
Query: 183 VCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSL 242
+C +A RA + G R+A+ D + + +L + + + LG+ +
Sbjct: 1 MCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAC 60
Query: 243 SEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIA 302
+ L+LD + + +K + + + AE + + ++ P+
Sbjct: 61 RSFQRALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACH 120
Query: 303 EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQ- 361
+ + E C + + EA V S++L+M+ N +AL R E+ ++A+Q
Sbjct: 121 RFKILKAE----CLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQF 176
Query: 362 ---------DYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKI----LGVKRN 404
D+E A N + ++ E + K+ + Y++ LG+ N
Sbjct: 177 FVQALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPN 232
Score = 31.6 bits (70), Expect = 1.8
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 52 QLADALSQFHAAVDGDPDNYI-AYYRRATVFLAMGKSKAALPDLTKVIQL-KMDFTAARL 109
+L DA+ AV D D YI AY RRA ++ + + A+ D KV Q K L
Sbjct: 253 KLDDAIEDCTNAVKLD-DTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLL 311
Query: 110 QRGHLLLKQGKLDEAEDDFKKVL--KSNPSENEEKEA 144
+ L LK+ K D+ K+L N SE+E K+A
Sbjct: 312 KNAQLELKKSK----RKDYYKILGVDKNASEDEIKKA 344
>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
[Homo sapiens]
Length = 326
Score = 83.6 bits (205), Expect = 4e-16
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Query: 394 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 453
DYY++LGV+R+A ++I KAYRKLAL+WHPD +N E K++AE+KF +A A EVLSD +
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPD--KNPENKEEAERKFKQVAEAYEVLSDAK 60
Query: 454 MRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPFR 498
R D D E GGGG H +PF G FR
Sbjct: 61 KR----DIYDKYGKEGLNGGGGGGSHFD-------SPFEFGFTFR 94
>gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b
[Homo sapiens]
Length = 241
Score = 83.6 bits (205), Expect = 4e-16
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Query: 394 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 453
DYY++LGV+R+A ++I KAYRKLAL+WHPD +N E K++AE+KF +A A EVLSD +
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPD--KNPENKEEAERKFKQVAEAYEVLSDAK 60
Query: 454 MRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPFR 498
R D D E GGGG H +PF G FR
Sbjct: 61 KR----DIYDKYGKEGLNGGGGGGSHFD-------SPFEFGFTFR 94
>gi|23503241 DnaJ homolog, subfamily B, member 8 [Homo sapiens]
Length = 232
Score = 79.7 bits (195), Expect = 6e-15
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 12/116 (10%)
Query: 394 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 453
+YY++LGV+ +A ++I KAYRKLAL+WHPD +N + K++AEKKF ++ A EVLSD +
Sbjct: 3 NYYEVLGVQASASPEDIKKAYRKLALRWHPD--KNPDNKEEAEKKFKLVSEAYEVLSDSK 60
Query: 454 MRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGF-NP-------FSSGGPFRFKF 501
R +D D+ GG P+H +++ F NP F PF F+F
Sbjct: 61 KRSLYD--RAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEF 114
>gi|21553335 DnaJ (Hsp40) homolog, subfamily B, member 7 [Homo
sapiens]
Length = 309
Score = 75.1 bits (183), Expect = 1e-13
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 17/117 (14%)
Query: 394 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 453
DYY++LG++R A ++I KAY K+AL+WHPD +N E K++AE+KF ++A A EVLS+ E
Sbjct: 3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPD--KNPENKEEAERKFKEVAEAYEVLSNDE 60
Query: 454 MRKKFDDGEDPLDAESQQGGG---------GNPFHRSWNSWQGFNPFSSGGPFRFKF 501
R D D E GGG G FH+ + ++ F PF F F
Sbjct: 61 KR----DIYDKYGTEGLNGGGSHFDDECEYGFTFHKPDDVFKEI--FHERDPFSFHF 111
>gi|7706495 DnaJ (Hsp40) homolog, subfamily B, member 11 precursor
[Homo sapiens]
Length = 358
Score = 74.7 bits (182), Expect = 2e-13
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
RD+YKILGV R+A ++I KAYRKLALQ HPD + +A++KF D+ AA EVLSD
Sbjct: 24 RDFYKILGVPRSASIKDIKKAYRKLALQLHPD---RNPDDPQAQEKFQDLGAAYEVLSDS 80
Query: 453 EMRKKFDD-GEDPLDAESQQGGG 474
E RK++D GE+ L Q G
Sbjct: 81 EKRKQYDTYGEEGLKDGHQSSHG 103
>gi|201862587 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 1
[Homo sapiens]
Length = 420
Score = 74.3 bits (181), Expect = 2e-13
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 15/110 (13%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+DYYKILG+ A + EI KAYRK+AL++HPD + ++ AE+KF +IA A +VLSDP
Sbjct: 75 KDYYKILGIPSGANEDEIKKAYRKMALKYHPD----KNKEPNAEEKFKEIAEAYDVLSDP 130
Query: 453 EMRKKFDD-GEDPL-DAESQQGGGGNPFHRSWNS---------WQGFNPF 491
+ R +D GE+ L GG FH +++ + G NPF
Sbjct: 131 KKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPF 180
>gi|201862518 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 2
[Homo sapiens]
Length = 382
Score = 74.3 bits (181), Expect = 2e-13
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 15/110 (13%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+DYYKILG+ A + EI KAYRK+AL++HPD + ++ AE+KF +IA A +VLSDP
Sbjct: 37 KDYYKILGIPSGANEDEIKKAYRKMALKYHPD----KNKEPNAEEKFKEIAEAYDVLSDP 92
Query: 453 EMRKKFDD-GEDPL-DAESQQGGGGNPFHRSWNS---------WQGFNPF 491
+ R +D GE+ L GG FH +++ + G NPF
Sbjct: 93 KKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPF 142
>gi|56549115 DnaJ (Hsp40) homolog, subfamily B, member 5 isoform 3
[Homo sapiens]
Length = 348
Score = 74.3 bits (181), Expect = 2e-13
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 15/110 (13%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+DYYKILG+ A + EI KAYRK+AL++HPD + ++ AE+KF +IA A +VLSDP
Sbjct: 3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPD----KNKEPNAEEKFKEIAEAYDVLSDP 58
Query: 453 EMRKKFDD-GEDPL-DAESQQGGGGNPFHRSWNS---------WQGFNPF 491
+ R +D GE+ L GG FH +++ + G NPF
Sbjct: 59 KKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPF 108
>gi|194306642 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
sapiens]
Length = 409
Score = 73.9 bits (180), Expect = 3e-13
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 381 EKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFI 440
E+ + + Q +DYY+ILGV R A +++ KAYR+LAL++HPD + A + F
Sbjct: 131 EQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPD----KNHAPGATEAFK 186
Query: 441 DIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHRSWNS----WQGFNPFSSGG 495
I A VLS+PE RK++D D ++ G G FHR + + FN F GG
Sbjct: 187 AIGTAYAVLSNPEKRKQYDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGG 245
>gi|194306640 DnaJ (Hsp40) homolog, subfamily B, member 12 [Homo
sapiens]
Length = 409
Score = 73.9 bits (180), Expect = 3e-13
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 381 EKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFI 440
E+ + + Q +DYY+ILGV R A +++ KAYR+LAL++HPD + A + F
Sbjct: 131 EQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRRLALKFHPD----KNHAPGATEAFK 186
Query: 441 DIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHRSWNS----WQGFNPFSSGG 495
I A VLS+PE RK++D D ++ G G FHR + + FN F GG
Sbjct: 187 AIGTAYAVLSNPEKRKQYDQFGDDKSQAARHGHGHGDFHRGFEADISPEDLFNMFFGGG 245
>gi|88501736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform a
[Homo sapiens]
Length = 277
Score = 73.9 bits (180), Expect = 3e-13
Identities = 48/112 (42%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 395 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 454
YY+IL V R+A +I KAYR+ ALQWHPD +N + K+ AEKKF ++A A EVLSD
Sbjct: 4 YYEILDVPRSASADDIKKAYRRKALQWHPD--KNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Query: 455 RKKFD---------DGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPF 497
R+ +D G P AE+ GG G F F SG PF
Sbjct: 62 REIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPF 113
>gi|27151736 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform b
[Homo sapiens]
Length = 324
Score = 73.9 bits (180), Expect = 3e-13
Identities = 48/112 (42%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 395 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 454
YY+IL V R+A +I KAYR+ ALQWHPD +N + K+ AEKKF ++A A EVLSD
Sbjct: 4 YYEILDVPRSASADDIKKAYRRKALQWHPD--KNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Query: 455 RKKFD---------DGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPF 497
R+ +D G P AE+ GG G F F SG PF
Sbjct: 62 REIYDRYGREGLTGTGTGPSRAEAGSGGPGFTFTFRSPEEVFREFFGSGDPF 113
>gi|47777312 DnaJ (Hsp40) homolog, subfamily B, member 3 [Homo
sapiens]
Length = 145
Score = 73.2 bits (178), Expect = 5e-13
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 394 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 453
DYY++L V R A + I KAYRKLAL+WHPD +N E K++AE++F +A A EVLSD +
Sbjct: 3 DYYEVLDVPRQASSEAIKKAYRKLALKWHPD--KNPENKEEAERRFKQVAEAYEVLSDAK 60
Query: 454 MRKKFDDGEDPLDAESQQGG--GGNPF 478
R D D +GG GG PF
Sbjct: 61 KR----DIYDRYGEAGAEGGCTGGRPF 83
>gi|6631085 DnaJ (Hsp40) homolog, subfamily B, member 4 [Homo
sapiens]
Length = 337
Score = 72.4 bits (176), Expect = 9e-13
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 23/111 (20%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+DYY ILG+++ A ++I KAYRK AL++HPD + + +AE+KF ++A A EVLSDP
Sbjct: 3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPD----KNKSPQAEEKFKEVAEAYEVLSDP 58
Query: 453 EMRKKFDD-GEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGGPFRFKFH 502
+ R+ +D GE+ L + G GG GG FR+ FH
Sbjct: 59 KKREIYDQFGEEGL----KGGAGGTD--------------GQGGTFRYTFH 91
>gi|194328758 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
[Homo sapiens]
Length = 426
Score = 72.4 bits (176), Expect = 9e-13
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 371 ENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEE 430
E+D Q +E + R K ++ YY ILGVK +A +EI KAYRKLAL++HPD +E
Sbjct: 13 ESDGQPKEQTPEKPRH-KMVKETQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEG 71
Query: 431 EKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGFNP 490
EK K I+ A EVLSDP+ R +D G + ++GG G+P S F+
Sbjct: 72 EKFKL------ISQAYEVLSDPKKRDVYDQGG---EQAIKEGGSGSPSFSS--PMDIFDM 120
Query: 491 FSSGG 495
F GG
Sbjct: 121 FFGGG 125
>gi|4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo
sapiens]
Length = 397
Score = 71.6 bits (174), Expect = 2e-12
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Query: 395 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 454
YY +LGVK NA ++E+ KAYRKLAL++HPD NE E KF I+ A EVLSD +
Sbjct: 7 YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE------KFKQISQAYEVLSDAKK 60
Query: 455 RKKFDDGEDPLDAESQQGGG-GNP 477
R+ +D G + E GGG G+P
Sbjct: 61 RELYDKGGEQAIKEGGAGGGFGSP 84
>gi|5453690 DnaJ (Hsp40) homolog, subfamily B, member 1 [Homo
sapiens]
Length = 340
Score = 70.1 bits (170), Expect = 4e-12
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+DYY+ LG+ R A +EI +AYR+ AL++HPD + ++ AE+KF +IA A +VLSDP
Sbjct: 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPD----KNKEPGAEEKFKEIAEAYDVLSDP 58
Query: 453 EMRKKFDD-GEDPLDAESQQGGGG 475
R+ FD GE+ L GG G
Sbjct: 59 RKREIFDRYGEEGLKGSGPSGGSG 82
>gi|194328760 DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2
[Homo sapiens]
Length = 397
Score = 70.1 bits (170), Expect = 4e-12
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 14/110 (12%)
Query: 386 LLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAA 445
++K++Q YY ILGVK +A +EI KAYRKLAL++HPD +E EK K I+ A
Sbjct: 1 MVKETQ---YYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKL------ISQA 51
Query: 446 KEVLSDPEMRKKFDDGEDPLDAESQQGGGGNPFHRSWNSWQGFNPFSSGG 495
EVLSDP+ R +D G + ++GG G+P S F+ F GG
Sbjct: 52 YEVLSDPKKRDVYDQGG---EQAIKEGGSGSPSFSS--PMDIFDMFFGGG 96
>gi|9558755 DnaJ (Hsp40) homolog, subfamily B, member 9 [Homo
sapiens]
Length = 223
Score = 69.3 bits (168), Expect = 8e-12
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 14/121 (11%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+ YY ILGV ++A +++I KA+ KLA+++HPD + + AE KF +IA A E LSD
Sbjct: 25 KSYYDILGVPKSASERQIKKAFHKLAMKYHPD----KNKSPDAEAKFREIAEAYETLSDA 80
Query: 453 EMRKKFDD-GEDPLDAESQQGGGGNPFHRSWN-----SWQGFNPF----SSGGPFRFKFH 502
RK++D G + Q G G+ F +S+N ++ F F ++G RF+ H
Sbjct: 81 NRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNFDDLFKDFGFFGQNQNTGSKKRFENH 140
Query: 503 F 503
F
Sbjct: 141 F 141
>gi|205360840 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
[Homo sapiens]
Length = 453
Score = 68.2 bits (165), Expect = 2e-11
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 392 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSD 451
K DYY+ILGV RNA ++EI KAY +LA ++HPD ++ KA++KF +A A EVLSD
Sbjct: 91 KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPD---TNKDDPKAKEKFSQLAEAYEVLSD 147
Query: 452 PEMRKKFD----DGEDPLDAESQ 470
RK++D G DP + SQ
Sbjct: 148 EVKRKQYDAYGSAGFDPGASGSQ 170
>gi|205360838 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1
[Homo sapiens]
Length = 480
Score = 68.2 bits (165), Expect = 2e-11
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 392 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSD 451
K DYY+ILGV RNA ++EI KAY +LA ++HPD ++ KA++KF +A A EVLSD
Sbjct: 91 KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPD---TNKDDPKAKEKFSQLAEAYEVLSD 147
Query: 452 PEMRKKFD----DGEDPLDAESQ 470
RK++D G DP + SQ
Sbjct: 148 EVKRKQYDAYGSAGFDPGASGSQ 170
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 67.4 bits (163), Expect = 3e-11
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 38/301 (12%)
Query: 27 EGAECGVNADVEKHL---ELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLA 83
E E G++ D +K L E G K G+ +A+ + +D DP N + RA+ +
Sbjct: 120 ESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFR 179
Query: 84 MGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPS------ 137
+ K A D + L +T A +RG KL+EA+ D+++VL+ P+
Sbjct: 180 LKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATN 239
Query: 138 ------------ENEEKEAQSQLIKSD-------EMQRLRSQALNA-------FGSGDYT 171
EN + +IKS E Q+ + QA++ F G Y
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYE 299
Query: 172 AAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTL 231
AI + + +A L RA ++K + +A D A L ++AF + T
Sbjct: 300 RAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTA 359
Query: 232 YYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKK--LNK-LIESAEELIRDGRYTDAT 288
LG + + L L+ +K+ ++KK L K +IE LI+ D+T
Sbjct: 360 RTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKKPLKKVIIEETGNLIQTIDVPDST 419
Query: 289 S 289
+
Sbjct: 420 T 420
Score = 36.2 bits (82), Expect = 0.072
Identities = 55/298 (18%), Positives = 115/298 (38%), Gaps = 33/298 (11%)
Query: 121 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRL--RSQALNAFGSGDYTAAIAFLD 178
+D D+ K ++ S ++E E++ I D + L + + F G Y AI
Sbjct: 98 VDRILDELDKDDSTHESLSQESESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYT 157
Query: 179 KILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDH 238
K ++ ++ L RA + + + A SD A L T+A+ + + L
Sbjct: 158 KGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKL 217
Query: 239 ELSLSEVRECLKLDQDHKRCFAHYKQVK-----KLNKLIESAEELIR----DGRYTDAT- 288
E + + L+L+ ++ +++ K N + A+ +I+ + + +A
Sbjct: 218 EEAKKDYERVLELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQ 277
Query: 289 SKYESVMKTEPSIAEYTVRSKERICHCFS---------------------KDEKPVEAIR 327
+K +++ + + + ER C++ K +K EA +
Sbjct: 278 NKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEK 337
Query: 328 VCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQR 385
C++ + ++ A R A +EA QD+ET ++Q L K ++
Sbjct: 338 DCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK 395
Score = 31.6 bits (70), Expect = 1.8
Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 8/198 (4%)
Query: 200 KEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCF 259
K E K + +++K+ + EA+ K+ ++ D E L + + +
Sbjct: 68 KAKESSKKTREENTKNRIKSYDYEAWAKLDV--DRILDELDKDDSTHESLSQESESEEDG 125
Query: 260 AHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKD 319
H K L L E + + G+Y +A Y M +P Y + +
Sbjct: 126 IHVDSQKAL-VLKEKGNKYFKQGKYDEAIDCYTKGMDADP----YNPVLPTNRASAYFRL 180
Query: 320 EKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREG 379
+K A C+ + + A R A + +EA +DYE E N+ +
Sbjct: 181 KKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNE 240
Query: 380 LEKAQRLLKQSQKRDYYK 397
L K + L S++ Y K
Sbjct: 241 LRKISQAL-ASKENSYPK 257
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 67.0 bits (162), Expect = 4e-11
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 27 EGAECGVNADVEKHL---ELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLA 83
E E G++ D +K L E G K G+ +A+ + +D DP N + RA+ +
Sbjct: 120 ESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFR 179
Query: 84 MGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPS------ 137
+ K A D + L +T A +RG KL+EA+ D+++VL+ P+
Sbjct: 180 LKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATN 239
Query: 138 ------------ENEEKEAQSQLIKSD-------EMQRLRSQALNA-------FGSGDYT 171
EN + +IKS E Q+ + QA++ F G Y
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYE 299
Query: 172 AAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTL 231
AI + + +A L RA ++K + +A D A L ++AF + T
Sbjct: 300 RAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTA 359
Query: 232 YYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTD 286
LG + + L L+ +K+ ++KK ELI G + D
Sbjct: 360 RTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK---------ELIEKGHWDD 405
Score = 36.6 bits (83), Expect = 0.055
Identities = 56/300 (18%), Positives = 116/300 (38%), Gaps = 33/300 (11%)
Query: 121 LDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRL--RSQALNAFGSGDYTAAIAFLD 178
+D D+ K ++ S ++E E++ I D + L + + F G Y AI
Sbjct: 98 VDRILDELDKDDSTHESLSQESESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYT 157
Query: 179 KILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDH 238
K ++ ++ L RA + + + A SD A L T+A+ + + L
Sbjct: 158 KGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKL 217
Query: 239 ELSLSEVRECLKLDQDHKRCFAHYKQVK-----KLNKLIESAEELIR----DGRYTDAT- 288
E + + L+L+ ++ +++ K N + A+ +I+ + + +A
Sbjct: 218 EEAKKDYERVLELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQ 277
Query: 289 SKYESVMKTEPSIAEYTVRSKERICHCFS---------------------KDEKPVEAIR 327
+K +++ + + + ER C++ K +K EA +
Sbjct: 278 NKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEK 337
Query: 328 VCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLL 387
C++ + ++ A R A +EA QD+ET ++Q L K ++ L
Sbjct: 338 DCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKEL 397
Score = 31.6 bits (70), Expect = 1.8
Identities = 41/198 (20%), Positives = 73/198 (36%), Gaps = 8/198 (4%)
Query: 200 KEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCF 259
K E K + +++K+ + EA+ K+ ++ D E L + + +
Sbjct: 68 KAKESSKKTREENTKNRIKSYDYEAWAKLDV--DRILDELDKDDSTHESLSQESESEEDG 125
Query: 260 AHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKD 319
H K L L E + + G+Y +A Y M +P Y + +
Sbjct: 126 IHVDSQKAL-VLKEKGNKYFKQGKYDEAIDCYTKGMDADP----YNPVLPTNRASAYFRL 180
Query: 320 EKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREG 379
+K A C+ + + A R A + +EA +DYE E N+ +
Sbjct: 181 KKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNE 240
Query: 380 LEKAQRLLKQSQKRDYYK 397
L K + L S++ Y K
Sbjct: 241 LRKISQAL-ASKENSYPK 257
>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
sapiens]
Length = 576
Score = 65.9 bits (159), Expect = 8e-11
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 395 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 454
+Y+ LGV+R+A ++E+ KAYRKLAL+WHPD +N + +A ++F I AA +VLSDP+
Sbjct: 4 HYEALGVRRDASEEELKKAYRKLALKWHPD--KNLDNAAEAAEQFKLIQAAYDVLSDPQE 61
Query: 455 RKKFDDGEDPL 465
R +D+ + L
Sbjct: 62 RAWYDNHREAL 72
>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
sapiens]
Length = 531
Score = 65.9 bits (159), Expect = 8e-11
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 395 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 454
+Y+ LGV+R+A ++E+ KAYRKLAL+WHPD +N + +A ++F I AA +VLSDP+
Sbjct: 4 HYEALGVRRDASEEELKKAYRKLALKWHPD--KNLDNAAEAAEQFKLIQAAYDVLSDPQE 61
Query: 455 RKKFDDGEDPL 465
R +D+ + L
Sbjct: 62 RAWYDNHREAL 72
>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
sapiens]
Length = 860
Score = 63.5 bits (153), Expect = 4e-10
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 21/227 (9%)
Query: 34 NADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMG-----KSK 88
N + L + L+ +G +A+ F + +PD A Y R + G ++
Sbjct: 140 NDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAE 199
Query: 89 AALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 148
AL +L++VI L+ D QR +L G+++EA +D K ++ PS
Sbjct: 200 LALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSA---------- 249
Query: 149 IKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAI 208
+ R + F S DY A + LE+ + F G ++AI
Sbjct: 250 ------RLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAI 303
Query: 209 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDH 255
K A K K D +A+ + Y +LG+ E + ++ L L+Q+H
Sbjct: 304 ESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNH 350
Score = 32.7 bits (73), Expect = 0.79
Identities = 20/96 (20%), Positives = 41/96 (42%)
Query: 54 ADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGH 113
A A F +++ + + IA + F G K A+ + ++ K+DF A G
Sbjct: 266 ATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQ 325
Query: 114 LLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLI 149
+ G + A + F+K L N + + + + ++
Sbjct: 326 AYRELGNFEAATESFQKALLLNQNHVQTLQLRGMML 361
Score = 31.2 bits (69), Expect = 2.3
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 324 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQ--------- 374
EA+ ++ +Q++P + + R Y I E Y A +D++ + E N+N
Sbjct: 234 EAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLT 292
Query: 375 -----QIREGLEKAQRLLKQS-QKRDYYKILG 400
++E +E + LKQ D YK LG
Sbjct: 293 FFHRGLLKEAIESFKEALKQKVDFIDAYKSLG 324
>gi|24308127 DnaJ (Hsp40) homolog, subfamily C, member 10 [Homo
sapiens]
Length = 793
Score = 63.2 bits (152), Expect = 5e-10
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 393 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 452
+D+Y +LGV + A +EI +A++KLAL+ HPD N A F+ I A EVL D
Sbjct: 34 QDFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN---NPNAHGDFLKINRAYEVLKDE 90
Query: 453 EMRKKFDD-GEDPLDAESQQGGGGNPFHRSWNSWQ 486
++RKK+D GE L E QGG + SWN ++
Sbjct: 91 DLRKKYDKYGEKGL--EDNQGGQ----YESWNYYR 119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,376,167
Number of Sequences: 37866
Number of extensions: 795958
Number of successful extensions: 4322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 3608
Number of HSP's gapped (non-prelim): 811
length of query: 504
length of database: 18,247,518
effective HSP length: 107
effective length of query: 397
effective length of database: 14,195,856
effective search space: 5635754832
effective search space used: 5635754832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.