Guide to the Human Genome
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Name: OR6F1 Sequence: fasta or formatted (308aa) NCBI GI: 52627164
Description:

olfactory receptor, family 6, subfamily F, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         26           2
 C cysteine            3.2         10           1
 D aspartate           1.9          6           1
 E glutamate           1.6          5           1
 F phenylalanine       6.5         20           2
 G glycine             4.5         14           1
 H histidine           2.3          7           1
 I isoleucine          7.5         23           2
 K lysine              3.2         10           2
 L leucine            15.3         47           3
 M methionine          2.6          8           1
 N asparagine          2.6          8           1
 P proline             3.6         11           1
 Q glutamine           2.6          8           1
 R arginine            2.6          8           1
 S serine              9.4         29           2
 T threonine           7.8         24           2
 V valine              8.8         27           3
 W tryptophan          1.6          5           1
 Y tyrosine            3.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily F, member 1 ... 
OR6M1                 0.496   olfactory receptor, family 6, subfamily M, member 1 ...
OR6N1                 0.492   olfactory receptor, family 6, subfamily N, member 1 ...
OR6A2                 0.485   olfactory receptor, family 6, subfamily A, member 2 ...
OR6B1                 0.484   olfactory receptor, family 6, subfamily B, member 1 ...
OR6X1                 0.467   olfactory receptor, family 6, subfamily X, member 1 ...
OR6C75                0.465   olfactory receptor, family 6, subfamily C, member 75...
OR6S1                 0.455   olfactory receptor, family 6, subfamily S, member 1 ...
OR6T1                 0.453   olfactory receptor, family 6, subfamily T, member 1 ...
OR6C65                0.453   olfactory receptor, family 6, subfamily C, member 65...
OR6Y1                 0.450   olfactory receptor, family 6, subfamily Y, member 1 ...
OR6C3                 0.446   olfactory receptor, family 6, subfamily C, member 3 ...
OR6P1                 0.444   olfactory receptor, family 6, subfamily P, member 1...
OR6C76                0.443   olfactory receptor, family 6, subfamily C, member 76...
OR6C70                0.441   olfactory receptor, family 6, subfamily C, member 70...
OR6Q1                 0.439   olfactory receptor, family 6, subfamily Q, member 1...
OR6C74                0.438   olfactory receptor, family 6, subfamily C, member 74...
OR11L1                0.438   olfactory receptor, family 11, subfamily L, member 1...
OR6C4                 0.434   olfactory receptor, family 6, subfamily C, member 4 ...
OR6B3                 0.434   olfactory receptor, family 6, subfamily B, member 3 ...
OR6C6                 0.432   olfactory receptor, family 6, subfamily C, member 6 ...
OR6B2                 0.431   olfactory receptor, family 6, subfamily B, member 2 ...
OR5A2                 0.431   olfactory receptor, family 5, subfamily A, member 2 ...
OR8I2                 0.429   olfactory receptor, family 8, subfamily I, member 2 ...
OR6N2                 0.429   olfactory receptor, family 6, subfamily N, member 2 ...
OR6C2                 0.429   olfactory receptor, family 6, subfamily C, member 2 ...
OR9G4                 0.427   olfactory receptor, family 9, subfamily G, member 4 ...
OR5V1                 0.427   olfactory receptor, family 5, subfamily V, member 1 ...
OR11G2                0.424   olfactory receptor, family 11, subfamily G, member 2...
OR6C1                 0.424   olfactory receptor, family 6, subfamily C, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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