Guide to the Human Genome
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Name: ZNF620 Sequence: fasta or formatted (422aa) NCBI GI: 52353239
Description:

zinc finger protein 620

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         17           1
 C cysteine            4.7         20           1
 D aspartate           2.1          9           1
 E glutamate           9.2         39           1
 F phenylalanine       5.5         23           1
 G glycine             7.3         31           2
 H histidine           5.5         23           2
 I isoleucine          3.6         15           2
 K lysine              8.5         36           2
 L leucine             6.4         27           2
 M methionine          1.4          6           1
 N asparagine          2.8         12           1
 P proline             4.0         17           1
 Q glutamine           6.6         28           1
 R arginine            5.0         21           2
 S serine              7.1         30           4
 T threonine           7.3         31           2
 V valine              4.3         18           1
 W tryptophan          1.7          7           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 620 
ZNF619                0.538   zinc finger protein 619 isoform 2 
ZNF619                0.520   zinc finger protein 619 isoform 1 
ZNF621                0.457   zinc finger protein 621 
ZNF621                0.457   zinc finger protein 621 
ZNF619                0.456   zinc finger protein 619 isoform 5 
ZNF383                0.429   zinc finger protein 383 
ZNF662                0.422   zinc finger protein 662 isoform 2 
ZNF619                0.403   zinc finger protein 619 isoform 4 
ZNF619                0.403   zinc finger protein 619 isoform 3 
ZNF570                0.398   zinc finger protein 570 
DKFZp686E2433         0.393   hypothetical protein LOC345462 
ZNF184                0.391   zinc finger protein 184 
ZNF3                  0.389   zinc finger protein 3 isoform 2 
ZNF566                0.387   zinc finger protein 566 isoform 1 
ZNF566                0.387   zinc finger protein 566 isoform 1 
ZNF566                0.387   zinc finger protein 566 isoform 1 
ZNF582                0.385   zinc finger protein 582 
ZNF829                0.384   zinc finger protein 829 
ZNF251                0.384   zinc finger protein 251 
ZNF566                0.384   zinc finger protein 566 isoform 2 
ZNF19                 0.383   zinc finger protein 19 
ZNF354C               0.383   zinc finger protein 354C 
ZNF34                 0.379   zinc finger protein 34 
ZNF485                0.374   zinc finger protein 485 
ZNF2                  0.371   zinc finger protein 2 isoform a 
ZNF790                0.369   zinc finger protein 790 
ZFP14                 0.368   zinc finger protein 14-like 
ZNF583                0.367   zinc finger protein 583 
ZNF583                0.367   zinc finger protein 583 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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