Search of human proteins with 51873038

Search of human proteins with 51873038

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51873038 oxoglutarate (alpha-ketoglutarate) dehydrogenase
(lipoamide) isoform 2 precursor [Homo sapiens]
         (427 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51873038 oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...   859   0.0  
gi|51873036 oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...   811   0.0  
gi|221316661 oxoglutarate dehydrogenase-like isoform a [Homo sap...   544   e-155
gi|221316665 oxoglutarate dehydrogenase-like isoform b [Homo sap...   461   e-130
gi|221316669 oxoglutarate dehydrogenase-like isoform c [Homo sap...   328   4e-90
gi|38788380 dehydrogenase E1 and transketolase domain containing...   116   3e-26
gi|224586880 Ras protein-specific guanine nucleotide-releasing f...    35   0.13 
gi|24797099 Ras protein-specific guanine nucleotide-releasing fa...    35   0.13 
gi|10864047 epidermal growth factor receptor pathway substrate 1...    30   4.2  
gi|55953102 tubby like protein 4 isoform 2 [Homo sapiens]              29   7.1  
gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]              29   7.1  
gi|71774197 ubiquitin specific protease 47 [Homo sapiens]              29   7.1  
gi|238231392 dedicator of cytokinesis 8 [Homo sapiens]                 29   9.3  
gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]                  29   9.3  

>gi|51873038 oxoglutarate (alpha-ketoglutarate) dehydrogenase
           (lipoamide) isoform 2 precursor [Homo sapiens]
          Length = 427

 Score =  859 bits (2220), Expect = 0.0
 Identities = 427/427 (100%), Positives = 427/427 (100%)

Query: 1   MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE 60
           MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE
Sbjct: 1   MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE 60

Query: 61  MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV 120
           MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV
Sbjct: 61  MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV 120

Query: 121 DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES 180
           DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES
Sbjct: 121 DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES 180

Query: 181 DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET 240
           DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET
Sbjct: 181 DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET 240

Query: 241 PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN 300
           PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN
Sbjct: 241 PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN 300

Query: 301 GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR 360
           GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR
Sbjct: 301 GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR 360

Query: 361 VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVRPRERRARQIVKAPCSS 420
           VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVRPRERRARQIVKAPCSS
Sbjct: 361 VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVRPRERRARQIVKAPCSS 420

Query: 421 MEFRSPT 427
           MEFRSPT
Sbjct: 421 MEFRSPT 427


>gi|51873036 oxoglutarate (alpha-ketoglutarate) dehydrogenase
           (lipoamide) isoform 1 precursor [Homo sapiens]
          Length = 1023

 Score =  811 bits (2096), Expect = 0.0
 Identities = 403/403 (100%), Positives = 403/403 (100%)

Query: 1   MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE 60
           MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE
Sbjct: 1   MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAEPFLSGTSSNYVEE 60

Query: 61  MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV 120
           MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV
Sbjct: 61  MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNV 120

Query: 121 DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES 180
           DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES
Sbjct: 121 DKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDES 180

Query: 181 DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET 240
           DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET
Sbjct: 181 DLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFET 240

Query: 241 PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN 300
           PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN
Sbjct: 241 PGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSEN 300

Query: 301 GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR 360
           GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR
Sbjct: 301 GVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINR 360

Query: 361 VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403
           VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKV
Sbjct: 361 VTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKV 403


>gi|221316661 oxoglutarate dehydrogenase-like isoform a [Homo
           sapiens]
          Length = 1010

 Score =  544 bits (1402), Expect = e-155
 Identities = 275/364 (75%), Positives = 304/364 (83%), Gaps = 8/364 (2%)

Query: 41  SAPVAAEPFLSGTS-SNYVEEMYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPL 99
           S P A  P   G   S+Y+EEMY AWLENP+SVHKSWD FFR  +  A  G+A   P   
Sbjct: 34  SGPPATFPSSKGGGGSSYMEEMYFAWLENPQSVHKSWDSFFREASEEAFSGSAQPRPP-- 91

Query: 100 SRGSLAAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDS 159
                + V  ++S V ++    KLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDS
Sbjct: 92  -----SVVHESRSAVSSRTKTSKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDS 146

Query: 160 SVPADIISSTDKLGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIG 219
            VP+D+I++ DKL FY L E+DLDK F LPTTTFIGG E+ L LREIIRRLE  YCQHIG
Sbjct: 147 FVPSDLITTIDKLAFYDLQEADLDKEFQLPTTTFIGGSENTLSLREIIRRLENTYCQHIG 206

Query: 220 VEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFG 279
           +EFMFIND+EQCQWIRQKFETPG+MQF++EEKRTLLARLVRS RFE+FL RKWSSEKRFG
Sbjct: 207 LEFMFINDVEQCQWIRQKFETPGVMQFSSEEKRTLLARLVRSMRFEDFLARKWSSEKRFG 266

Query: 280 LEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEA 339
           LEGCEV+IPALKTIIDKSSE G++ VI+GMPHRGRLNVLANVIRK+LEQIFCQFD KLEA
Sbjct: 267 LEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEA 326

Query: 340 ADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTE 399
           ADEGSGDVKYHLGMYH RINRVT+RNITLSLVANPSHLEA DPVV GKTKAEQFY GD +
Sbjct: 327 ADEGSGDVKYHLGMYHERINRVTNRNITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDAQ 386

Query: 400 GKKV 403
           GKKV
Sbjct: 387 GKKV 390


>gi|221316665 oxoglutarate dehydrogenase-like isoform b [Homo
           sapiens]
          Length = 953

 Score =  461 bits (1186), Expect = e-130
 Identities = 224/267 (83%), Positives = 245/267 (91%)

Query: 137 YQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDESDLDKVFHLPTTTFIGG 196
           ++IRGHHVAQLDPLGILDADLDS VP+D+I++ DKL FY L E+DLDK F LPTTTFIGG
Sbjct: 67  HKIRGHHVAQLDPLGILDADLDSFVPSDLITTIDKLAFYDLQEADLDKEFQLPTTTFIGG 126

Query: 197 QESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLA 256
            E+ L LREIIRRLE  YCQHIG+EFMFIND+EQCQWIRQKFETPG+MQF++EEKRTLLA
Sbjct: 127 SENTLSLREIIRRLENTYCQHIGLEFMFINDVEQCQWIRQKFETPGVMQFSSEEKRTLLA 186

Query: 257 RLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLN 316
           RLVRS RFE+FL RKWSSEKRFGLEGCEV+IPALKTIIDKSSE G++ VI+GMPHRGRLN
Sbjct: 187 RLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRLN 246

Query: 317 VLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSH 376
           VLANVIRK+LEQIFCQFD KLEAADEGSGDVKYHLGMYH RINRVT+RNITLSLVANPSH
Sbjct: 247 VLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVANPSH 306

Query: 377 LEAADPVVMGKTKAEQFYCGDTEGKKV 403
           LEA DPVV GKTKAEQFY GD +GKKV
Sbjct: 307 LEAVDPVVQGKTKAEQFYRGDAQGKKV 333


>gi|221316669 oxoglutarate dehydrogenase-like isoform c [Homo
           sapiens]
          Length = 801

 Score =  328 bits (842), Expect = 4e-90
 Identities = 159/181 (87%), Positives = 171/181 (94%)

Query: 223 MFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEG 282
           MFIND+EQCQWIRQKFETPG+MQF++EEKRTLLARLVRS RFE+FL RKWSSEKRFGLEG
Sbjct: 1   MFINDVEQCQWIRQKFETPGVMQFSSEEKRTLLARLVRSMRFEDFLARKWSSEKRFGLEG 60

Query: 283 CEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADE 342
           CEV+IPALKTIIDKSSE G++ VI+GMPHRGRLNVLANVIRK+LEQIFCQFD KLEAADE
Sbjct: 61  CEVMIPALKTIIDKSSEMGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADE 120

Query: 343 GSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKK 402
           GSGDVKYHLGMYH RINRVT+RNITLSLVANPSHLEA DPVV GKTKAEQFY GD +GKK
Sbjct: 121 GSGDVKYHLGMYHERINRVTNRNITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDAQGKK 180

Query: 403 V 403
           V
Sbjct: 181 V 181


>gi|38788380 dehydrogenase E1 and transketolase domain containing 1
           [Homo sapiens]
          Length = 919

 Score =  116 bits (291), Expect = 3e-26
 Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 34/288 (11%)

Query: 115 EAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGF 174
           E Q  +++   DH  +  L+  Y   GH  A+++PL    A L++      +  T     
Sbjct: 42  EPQGALERPPVDH-GLARLVTVYCEHGHKAAKINPLFTGQALLENVPEIQALVQT----- 95

Query: 175 YGLDESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWI 234
                  L   FH      +G +E++L   E++  L   YC  I +E   +   ++  W 
Sbjct: 96  -------LQGPFHTAGLLNMGKEEASL--EEVLVYLNQIYCGQISIETSQLQSQDEKDWF 146

Query: 235 RQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTII 294
            ++FE      FT EE++ L   ++ S  F+ FL  K+S+ KR+G EG E ++     ++
Sbjct: 147 AKRFEELQKETFTTEERKHLSKLMLESQEFDHFLATKFSTVKRYGGEGAESMMGFFHELL 206

Query: 295 DKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAAD--EGSGDVKYHL- 351
             S+ +G+  VI+GMPHRGRLN+L  +++   E +F +     E  +    +GDV  HL 
Sbjct: 207 KMSAYSGITDVIIGMPHRGRLNLLTGLLQFPPELMFRKMRGLSEFPENFSATGDVLSHLT 266

Query: 352 -------GMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQ 392
                  G +H          + ++++ NPSHLEA +PV +GKT+  Q
Sbjct: 267 SSVDLYFGAHH---------PLHVTMLPNPSHLEAVNPVAVGKTRGRQ 305


>gi|224586880 Ras protein-specific guanine nucleotide-releasing
           factor 1 isoform 3 [Homo sapiens]
          Length = 1257

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 255 LARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGR 314
           L+R++     E    RK  + +R  +EGCE+L+   +T + + S   V     G   RGR
Sbjct: 419 LSRIMHDEVSETENIRKNLAIERMIIEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGR 478

Query: 315 LNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHL 351
           L  L+  ++KE E+    F   L     GSG  K HL
Sbjct: 479 LGSLS--LKKEGERQCFLFSKHLIICTRGSGG-KLHL 512


>gi|24797099 Ras protein-specific guanine nucleotide-releasing
           factor 1 isoform 1 [Homo sapiens]
          Length = 1273

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 255 LARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDKSSENGVDYVIMGMPHRGR 314
           L+R++     E    RK  + +R  +EGCE+L+   +T + + S   V     G   RGR
Sbjct: 419 LSRIMHDEVSETENIRKNLAIERMIIEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGR 478

Query: 315 LNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHL 351
           L  L+  ++KE E+    F   L     GSG  K HL
Sbjct: 479 LGSLS--LKKEGERQCFLFSKHLIICTRGSGG-KLHL 512


>gi|10864047 epidermal growth factor receptor pathway substrate
           15-like 1 [Homo sapiens]
          Length = 864

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 77  DIFFRNTNAGAPPGTAYQSPLPLSRGSLAAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRA 136
           ++   N N   PP   + +  PL     +A AH    VE +   D + E  L +  L+  
Sbjct: 88  EVTLSNLNLSMPPPKFHDTSSPLMVTPPSAEAHWAVRVEEKAKFDGIFESLLPINGLLSG 147

Query: 137 YQIRGHHVAQLDPLGILDADLDSSVPADIISSTDKLGFYGLDESDLDKVFHLPTTTFIGG 196
            +++                ++S +P D++           D SD+DK  HL    F   
Sbjct: 148 DKVK-------------PVLMNSKLPLDVLGRV-------WDLSDIDKDGHLDRDEF--- 184

Query: 197 QESALPLREIIRRLE 211
              A+ +  + R LE
Sbjct: 185 ---AVAMHLVYRALE 196


>gi|55953102 tubby like protein 4 isoform 2 [Homo sapiens]
          Length = 678

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 100 SRGSLAAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPL 150
           ++G L AVA     +E Q  + +L    L   ++++ Y +RG H+  LD L
Sbjct: 294 TQGDLLAVAG----MERQTQLGELPNGPLLKSAMVKFYNVRGEHIFTLDTL 340


>gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]
          Length = 1543

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 100 SRGSLAAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPL 150
           ++G L AVA     +E Q  + +L    L   ++++ Y +RG H+  LD L
Sbjct: 294 TQGDLLAVAG----MERQTQLGELPNGPLLKSAMVKFYNVRGEHIFTLDTL 340


>gi|71774197 ubiquitin specific protease 47 [Homo sapiens]
          Length = 1287

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 327  EQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVMG 386
            E  +  F ++  AADEGSG+        H+ +    D+ ITL+  A   HLE    V+  
Sbjct: 940  EMQYMYFKAEPYAADEGSGE-------GHKWLMVHVDKRITLA--AFKQHLEPFVGVLSS 990

Query: 387  KTKAEQFYCGDTEGKKVRPRE 407
              K  + Y  + E + VR  E
Sbjct: 991  HFKVFRVYASNQEFESVRLNE 1011


>gi|238231392 dedicator of cytokinesis 8 [Homo sapiens]
          Length = 2099

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 171  KLGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFM 223
            ++GF+G    DLD+        F+  + +   L EI  RLE  Y Q  G EF+
Sbjct: 1796 RVGFFGSKFGDLDE------QEFVYKEPAITKLPEISHRLEAFYGQCFGAEFV 1842


>gi|32880231 vestigial-like 2 isoform 1 [Homo sapiens]
          Length = 317

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 26/166 (15%)

Query: 13  PLTASQTVKTFSQNRPAAARTFQQIRCYSAPVAAE---------PFLSGTSSNYVEEMYC 63
           P ++     +FS   PA+ +  +       P  AE          +  G  S+ V+E + 
Sbjct: 45  PSSSGSGSSSFSSQTPASIKEEEGSPEKERPPEAEYINSRCVLFTYFQGDISSVVDEHFS 104

Query: 64  AWLENPKSVHKS------------W-DIFFRNTNAGAPPG---TAYQSPLPLSRGSLAAV 107
             L  P S   S            W D  F  +    P     +AYQ+P+P   GS  A 
Sbjct: 105 RALSQPSSYSPSCTSSKAPRSSGPWRDCSFPMSQRSFPASFWNSAYQAPVPPPLGSPLAT 164

Query: 108 AHAQ-SLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGI 152
           AH++     A P     +  HL   +    +    HH     P  +
Sbjct: 165 AHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAHPHHPYAL 210


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,908,089
Number of Sequences: 37866
Number of extensions: 687674
Number of successful extensions: 1624
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1613
Number of HSP's gapped (non-prelim): 18
length of query: 427
length of database: 18,247,518
effective HSP length: 105
effective length of query: 322
effective length of database: 14,271,588
effective search space: 4595451336
effective search space used: 4595451336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.