BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens] (129 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens] 274 1e-74 gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] 205 9e-54 gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 205 9e-54 gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 205 9e-54 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 32 0.14 gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A... 31 0.24 gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A (... 31 0.24 gi|148746206 MAGE-like protein 2 [Homo sapiens] 31 0.31 gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo sap... 30 0.40 gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 30 0.40 gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B... 30 0.40 gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B... 30 0.40 gi|110611910 leukocyte immunoglobulin-like receptor, subfamily A... 30 0.40 gi|47519953 leukocyte immunoglobulin-like receptor subfamily A m... 30 0.40 gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 30 0.53 gi|239752280 PREDICTED: similar to family with sequence similari... 30 0.69 gi|210032463 family with sequence similarity 48, member B2 [Homo... 30 0.69 gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa... 29 0.90 gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa... 29 0.90 gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 29 0.90 gi|122937335 F-box protein 46 [Homo sapiens] 29 0.90 gi|34996489 pleckstrin homology domain interacting protein [Homo... 28 1.5 gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B... 28 1.5 gi|125987591 leukocyte immunoglobulin-like receptor, subfamily B... 28 1.5 gi|5803070 leukocyte immunoglobulin-like receptor, subfamily B, ... 28 1.5 gi|157276588 basonuclin 1 [Homo sapiens] 28 1.5 gi|61888836 Spi-B transcription factor (Spi-1/PU.1 related) [Hom... 28 2.0 gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 28 2.0 gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 28 2.0 gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 28 2.6 >gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens] Length = 129 Score = 274 bits (701), Expect = 1e-74 Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQPCFEW 120 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQPCFEW Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQPCFEW 120 Query: 121 RREQERGRP 129 RREQERGRP Sbjct: 121 RREQERGRP 129 >gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] Length = 163 Score = 205 bits (521), Expect = 9e-54 Identities = 104/130 (80%), Positives = 107/130 (82%), Gaps = 5/130 (3%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAE-----PKSCVVADPPLPAQ 115 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY A P S P Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 116 PCFEWRREQE 125 P +W+ + E Sbjct: 121 PEGQWQHQAE 130 >gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] Length = 184 Score = 205 bits (521), Expect = 9e-54 Identities = 104/130 (80%), Positives = 107/130 (82%), Gaps = 5/130 (3%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAE-----PKSCVVADPPLPAQ 115 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY A P S P Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 116 PCFEWRREQE 125 P +W+ + E Sbjct: 121 PEGQWQHQAE 130 >gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] Length = 184 Score = 205 bits (521), Expect = 9e-54 Identities = 104/130 (80%), Positives = 107/130 (82%), Gaps = 5/130 (3%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAE-----PKSCVVADPPLPAQ 115 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY A P S P Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 116 PCFEWRREQE 125 P +W+ + E Sbjct: 121 PEGQWQHQAE 130 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 32.0 bits (71), Expect = 0.14 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Query: 60 LRPTSQEDKAT---QTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQP 116 + P +++++A L+P +PS LP T P L P P V+ PPLP+ P Sbjct: 390 MMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPP----VSPPPLPSPP 445 Query: 117 CFEWRREQERGRP 129 + EQE P Sbjct: 446 PPPAQEEQEESPP 458 >gi|195972797 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 isoform a [Homo sapiens] Length = 483 Score = 31.2 bits (69), Expect = 0.24 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD-----PPL 112 PG +P + +A TL P SPS G C + AP++P ++ P L Sbjct: 267 PGWQPQAGLSQANFTLGPVSPSHGGQYRCYSAHNLSSEWSAPSDPLDILITGQFYDRPSL 326 Query: 113 PAQP 116 QP Sbjct: 327 SVQP 330 >gi|5803068 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 isoform b [Homo sapiens] Length = 466 Score = 31.2 bits (69), Expect = 0.24 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD-----PPL 112 PG +P + +A TL P SPS G C + AP++P ++ P L Sbjct: 267 PGWQPQAGLSQANFTLGPVSPSHGGQYRCYSAHNLSSEWSAPSDPLDILITGQFYDRPSL 326 Query: 113 PAQP 116 QP Sbjct: 327 SVQP 330 >gi|148746206 MAGE-like protein 2 [Homo sapiens] Length = 646 Score = 30.8 bits (68), Expect = 0.31 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 62 PTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQP 116 P+S AT PAS + P +E P+ L YA +P +CV A P +P P Sbjct: 182 PSSSVFPATSQFQPASLN-AFKGPSAASETPKSLPYALQDPFACVEALPAVPWVP 235 >gi|223005864 carboxypeptidase X (M14 family), member 2 [Homo sapiens] Length = 756 Score = 30.4 bits (67), Expect = 0.40 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 96 FYAPAEPKSCVVADPPLPAQPCFEWRREQERGRP 129 +YA EP+ PPLPA P EW R + RP Sbjct: 46 YYARPEPE-LETFSPPLPAGPGEEWERRPQEPRP 78 >gi|100913209 heat shock transcription factor 4 isoform b [Homo sapiens] Length = 492 Score = 30.4 bits (67), Expect = 0.40 Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 13/98 (13%) Query: 26 PGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQ--TLSPASPSQGVM 83 PG+LL F QS L P + L L P GP + ++ + + LSP+S + Sbjct: 231 PGALLQDPYFIQSPL--PETNLGLSP-HRARGPIISDIPEDSPSPEGTRLSPSSDGRREK 287 Query: 84 LPCGVTEEPQR--------LFYAPAEPKSCVVADPPLP 113 + EEP L AP E CV A PPLP Sbjct: 288 GLALLKEEPASPGGDGEAGLALAPNECDFCVTAPPPLP 325 >gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B, member 3 isoform 1 [Homo sapiens] Length = 632 Score = 30.4 bits (67), Expect = 0.40 Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVA 108 PG +P + +A TL P SPS G C + AP++P + ++A Sbjct: 268 PGQQPQAGLSQANFTLGPVSPSNGGQYRCYGAHNLSSEWSAPSDPLNILMA 318 >gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B, member 3 isoform 2 [Homo sapiens] Length = 631 Score = 30.4 bits (67), Expect = 0.40 Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVA 108 PG +P + +A TL P SPS G C + AP++P + ++A Sbjct: 268 PGQQPQAGLSQANFTLGPVSPSNGGQYRCYGAHNLSSEWSAPSDPLNILMA 318 >gi|110611910 leukocyte immunoglobulin-like receptor, subfamily A, member 6 [Homo sapiens] Length = 481 Score = 30.4 bits (67), Expect = 0.40 Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVA 108 PG +P + +A TL P SPS G C + AP++P + ++A Sbjct: 268 PGQQPQAGLSQANFTLGPVSPSHGGQYRCYGAHNLSSEWSAPSDPLNILMA 318 >gi|47519953 leukocyte immunoglobulin-like receptor subfamily A member 4 [Homo sapiens] Length = 499 Score = 30.4 bits (67), Expect = 0.40 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD-----PPL 112 PG +P + +A TLSP S S G C + AP++P ++A P L Sbjct: 267 PGRQPQAGLSQANFTLSPVSRSYGGQYRCYGAHNVSSEWSAPSDPLDILIAGQISDRPSL 326 Query: 113 PAQP 116 QP Sbjct: 327 SVQP 330 >gi|55741675 hypothetical protein LOC22889 [Homo sapiens] Length = 614 Score = 30.0 bits (66), Expect = 0.53 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 59 GLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVADPPLPAQPCF 118 G+ P + TQ PAS Q M + P + PA P+ PPLP+QP Sbjct: 401 GVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTAL-PAGPQPQPQPQPPLPSQPQA 459 Query: 119 EWRREQE 125 + RR E Sbjct: 460 QKRRFTE 466 >gi|239752280 PREDICTED: similar to family with sequence similarity 48, member B2 [Homo sapiens] Length = 779 Score = 29.6 bits (65), Expect = 0.69 Identities = 16/47 (34%), Positives = 23/47 (48%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPK 103 G GL+P Q + S P QGV LP + ++PQ L +P+ Sbjct: 679 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPLLLLQPQPQ 725 >gi|210032463 family with sequence similarity 48, member B2 [Homo sapiens] Length = 817 Score = 29.6 bits (65), Expect = 0.69 Identities = 16/47 (34%), Positives = 23/47 (48%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPK 103 G GL+P Q + S P QGV LP + ++PQ L +P+ Sbjct: 717 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPLLLLQPQPQ 763 >gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sapiens] Length = 694 Score = 29.3 bits (64), Expect = 0.90 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%) Query: 15 FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74 F P + +PV PGS L Q+ D PL+ + P P++Q D ++ TL Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159 Query: 75 PASPSQGVMLP-----CGVTEEPQ 93 P P Q + +P G+ E+PQ Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181 >gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sapiens] Length = 724 Score = 29.3 bits (64), Expect = 0.90 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%) Query: 15 FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74 F P + +PV PGS L Q+ D PL+ + P P++Q D ++ TL Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159 Query: 75 PASPSQGVMLP-----CGVTEEPQ 93 P P Q + +P G+ E+PQ Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181 >gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] Length = 480 Score = 29.3 bits (64), Expect = 0.90 Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 4/74 (5%) Query: 59 GLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEP--KSCVVADPPLPAQP 116 G RP SQ +T +PA P G P EP R A EP +S PP P Sbjct: 191 GGRPKSQPPLPQETAAPA-PQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPG 249 Query: 117 CF-EWRREQERGRP 129 R + GRP Sbjct: 250 ALSRASRSRAAGRP 263 >gi|122937335 F-box protein 46 [Homo sapiens] Length = 603 Score = 29.3 bits (64), Expect = 0.90 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 57 GPGLRPTSQEDKAT----QTLSP---ASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD 109 GPG R +DK T Q +SP A PS L E + APA P+ A Sbjct: 295 GPGARA---KDKITCDLYQLISPSRDALPSNVEFLLARADEASEGDSPAPARPEDTPPAP 351 Query: 110 PPLPAQPC 117 PP PA+ C Sbjct: 352 PPPPARDC 359 >gi|34996489 pleckstrin homology domain interacting protein [Homo sapiens] Length = 1821 Score = 28.5 bits (62), Expect = 1.5 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 5 QCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPL 44 QC EEL + +FQ ED EP QP LL + + ++D P+ Sbjct: 1324 QC-EELLNLIFQCEDSEPFRQPVDLLEYPDY-RDIIDTPM 1361 >gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B, member 5 isoform 3 [Homo sapiens] Length = 491 Score = 28.5 bits (62), Expect = 1.5 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD--PPLPA 114 G G +P + +A TL P S S G C + AP++P ++A P +PA Sbjct: 166 GSGQQPQAGLSQANFTLGPVSRSHGGQYRCYGAHNLSPRWSAPSDPLDILIAGLIPDIPA 225 >gi|125987591 leukocyte immunoglobulin-like receptor, subfamily B, member 5 isoform 1 [Homo sapiens] Length = 591 Score = 28.5 bits (62), Expect = 1.5 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD--PPLPA 114 G G +P + +A TL P S S G C + AP++P ++A P +PA Sbjct: 266 GSGQQPQAGLSQANFTLGPVSRSHGGQYRCYGAHNLSPRWSAPSDPLDILIAGLIPDIPA 325 >gi|5803070 leukocyte immunoglobulin-like receptor, subfamily B, member 5 isoform 2 [Homo sapiens] Length = 590 Score = 28.5 bits (62), Expect = 1.5 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEPKSCVVAD--PPLPA 114 G G +P + +A TL P S S G C + AP++P ++A P +PA Sbjct: 266 GSGQQPQAGLSQANFTLGPVSRSHGGQYRCYGAHNLSPRWSAPSDPLDILIAGLIPDIPA 325 >gi|157276588 basonuclin 1 [Homo sapiens] Length = 994 Score = 28.5 bits (62), Expect = 1.5 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY-APAEPKSCVVADPPLP 113 C P P S ED Q P GV+ P T +P FY +PA P LP Sbjct: 450 CRPPPSYPGSGEDSKGQPAFPNIGQNGVLFPNLKTVQPVLPFYRSPATPAEVANTPGILP 509 Query: 114 AQP 116 + P Sbjct: 510 SLP 512 >gi|61888836 Spi-B transcription factor (Spi-1/PU.1 related) [Homo sapiens] Length = 262 Score = 28.1 bits (61), Expect = 2.0 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 43 PLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAEP 102 P L+L P GPGL E+ A+QTL P P+ ++EE +PA Sbjct: 85 PAGNLELAPSLEAPGPGLPAYPTENFASQTLVP--PAYAPYPSPVLSEEEDLPLDSPALE 142 Query: 103 KSCVVADPPLPAQP 116 S +D L A P Sbjct: 143 VSDSESDEALVAGP 156 >gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] Length = 1184 Score = 28.1 bits (61), Expect = 2.0 Identities = 14/38 (36%), Positives = 17/38 (44%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92 CCG GLR ++ + P VML C EEP Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558 >gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] Length = 1231 Score = 28.1 bits (61), Expect = 2.0 Identities = 14/38 (36%), Positives = 17/38 (44%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92 CCG GLR ++ + P VML C EEP Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558 >gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo sapiens] Length = 457 Score = 27.7 bits (60), Expect = 2.6 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLP-CGVTEEPQRLFYAPAEPKSCV 106 C G ++++K + SPA S P G+ +E QR Y P+ P S V Sbjct: 145 CLGGAQATAAEKEKLPSSSSPACQSPPQSFPNAGIPQESQRASY-PSSPASAV 196 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.135 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,891,772 Number of Sequences: 37866 Number of extensions: 359029 Number of successful extensions: 1252 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 54 Number of HSP's that attempted gapping in prelim test: 1199 Number of HSP's gapped (non-prelim): 109 length of query: 129 length of database: 18,247,518 effective HSP length: 90 effective length of query: 39 effective length of database: 14,839,578 effective search space: 578743542 effective search space used: 578743542 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.