Guide to the Human Genome
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Name: DUPD1 Sequence: fasta or formatted (220aa) NCBI GI: 51491914
Description:

dual specificity phosphatase and pro isomerase domain containing 1

Referenced in:

Dual-Specificity Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         17           3
 C cysteine            1.4          3           1
 D aspartate           8.2         18           2
 E glutamate           7.7         17           3
 F phenylalanine       3.6          8           2
 G glycine             5.9         13           1
 H histidine           3.2          7           1
 I isoleucine          2.7          6           1
 K lysine              5.5         12           1
 L leucine            10.0         22           1
 M methionine          2.7          6           1
 N asparagine          2.7          6           1
 P proline             3.6          8           1
 Q glutamine           5.0         11           2
 R arginine            7.7         17           3
 S serine              5.5         12           2
 T threonine           4.5         10           1
 V valine              6.4         14           1
 W tryptophan          1.4          3           1
 Y tyrosine            4.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dual specificity phosphatase and pro isomerase domai... 
DUSP13                0.366   testis and skeletal muscle-specific dual specificity...
DUSP13                0.366   testis and skeletal muscle-specific dual specificity...
DUSP13                0.366   testis and skeletal muscle-specific dual specificity...
DUSP26                0.352   dual specificity phosphatase 26 
DUSP13                0.338   muscle-restricted dual specificity phosphatase isofo...
DUSP27                0.317   dual specificity phosphatase 27 
DUSP3                 0.258   dual specificity phosphatase 3 
DUSP22                0.122   dual specificity phosphatase 22 
DUSP9                 0.122   dual specificity phosphatase 9 
DUSP4                 0.117   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.117   dual specificity phosphatase 4 isoform 2 
SSH1                  0.113   slingshot 1 isoform 1 
SSH1                  0.113   slingshot 1 isoform 3 
SSH1                  0.113   slingshot 1 isoform 2 
DUSP2                 0.108   dual specificity phosphatase 2 
SSH3                  0.103   slingshot homolog 3 
DUSP14                0.101   dual specificity phosphatase 14 
DUSP19                0.101   dual specificity phosphatase 19 isoform 1 
DUSP16                0.099   dual specificity phosphatase 16 
DUSP10                0.099   dual specificity phosphatase 10 isoform a 
DUSP1                 0.094   dual specificity phosphatase 1 
DUSP18                0.094   dual specificity phosphatase 18 
SSH2                  0.092   slingshot 2 
LOC100290651          0.089   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.089   serine/threonine/tyrosine interacting protein [Homo...
STYX                  0.089   serine/threonine/tyrosine interacting protein 
DUSP7                 0.087   dual specificity phosphatase 7 
DUSP5                 0.087   dual specificity phosphatase 5 
DUSP6                 0.085   dual specificity phosphatase 6 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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