Guide to the Human Genome
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Name: DUSP18 Sequence: fasta or formatted (188aa) NCBI GI: 51093845
Description:

dual specificity phosphatase 18

Referenced in:

Dual-Specificity Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         13           2
 C cysteine            2.7          5           1
 D aspartate           3.7          7           1
 E glutamate           3.7          7           1
 F phenylalanine       3.7          7           2
 G glycine             3.7          7           1
 H histidine           3.7          7           1
 I isoleucine          6.9         13           2
 K lysine              3.7          7           1
 L leucine             9.0         17           2
 M methionine          5.3         10           1
 N asparagine          4.8          9           2
 P proline             5.9         11           1
 Q glutamine           4.8          9           1
 R arginine            3.7          7           1
 S serine             10.1         19           2
 T threonine           4.3          8           1
 V valine              8.5         16           2
 W tryptophan          1.1          2           1
 Y tyrosine            3.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dual specificity phosphatase 18 
DUSP21                0.695   dual specificity phosphatase 21 
DUSP14                0.493   dual specificity phosphatase 14 
DUSP1                 0.210   dual specificity phosphatase 1 
DUSP4                 0.196   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.196   dual specificity phosphatase 4 isoform 2 
DUSP15                0.188   dual specificity phosphatase 15 isoform a 
DUSP28                0.182   dual specificity phosphatase 28 
DUSP5                 0.179   dual specificity phosphatase 5 
DUSP19                0.176   dual specificity phosphatase 19 isoform 1 
DUSP8                 0.174   dual specificity phosphatase 8 
DUSP22                0.160   dual specificity phosphatase 22 
DUSP16                0.157   dual specificity phosphatase 16 
DUSP10                0.157   dual specificity phosphatase 10 isoform a 
DUSP2                 0.154   dual specificity phosphatase 2 
SSH3                  0.148   slingshot homolog 3 
DUSP26                0.148   dual specificity phosphatase 26 
DUSP10                0.146   dual specificity phosphatase 10 isoform b 
DUSP10                0.146   dual specificity phosphatase 10 isoform b 
DUSP13                0.137   muscle-restricted dual specificity phosphatase isofo...
DUSP7                 0.137   dual specificity phosphatase 7 
DUSP13                0.134   testis and skeletal muscle-specific dual specificity...
DUSP13                0.134   testis and skeletal muscle-specific dual specificity...
DUSP13                0.134   testis and skeletal muscle-specific dual specificity...
DUSP9                 0.132   dual specificity phosphatase 9 
SSH1                  0.129   slingshot 1 isoform 1 
SSH1                  0.129   slingshot 1 isoform 3 
SSH1                  0.129   slingshot 1 isoform 2 
LOC100290651          0.126   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.126   serine/threonine/tyrosine interacting protein [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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