Guide to the Human Genome
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Name: DUSP13 Sequence: fasta or formatted (188aa) NCBI GI: 56117818
Description:

muscle-restricted dual specificity phosphatase isoform 1

Referenced in:

Dual-Specificity Phosphatases
Muscle
Testes and Sperm

Other entries for this name:
alt prot [248aa] testis and skeletal muscle-specific dual specificity phosphatase ...
alt prot [291aa] testis and skeletal muscle-specific dual specificity phosphatase ...
alt prot [198aa] testis and skeletal muscle-specific dual specificity phosphatase ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         18           2
 C cysteine            2.7          5           1
 D aspartate           4.8          9           1
 E glutamate           4.3          8           2
 F phenylalanine       4.3          8           1
 G glycine             8.0         15           2
 H histidine           4.3          8           1
 I isoleucine          3.2          6           1
 K lysine              2.7          5           1
 L leucine            13.3         25           2
 M methionine          1.1          2           1
 N asparagine          3.2          6           2
 P proline             4.8          9           1
 Q glutamine           4.3          8           2
 R arginine            6.4         12           1
 S serine              8.0         15           2
 T threonine           3.7          7           1
 V valine              7.4         14           2
 W tryptophan          1.6          3           1
 Y tyrosine            2.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscle-restricted dual specificity phosphatase isofo... 
DUSP13                0.478   testis and skeletal muscle-specific dual specificity...
DUSP26                0.475   dual specificity phosphatase 26 
DUPD1                 0.400   dual specificity phosphatase and pro isomerase domai...
DUSP13                0.350   testis and skeletal muscle-specific dual specificity...
DUSP13                0.350   testis and skeletal muscle-specific dual specificity...
DUSP27                0.331   dual specificity phosphatase 27 
DUSP3                 0.311   dual specificity phosphatase 3 
DUSP1                 0.175   dual specificity phosphatase 1 
DUSP14                0.172   dual specificity phosphatase 14 
DUSP4                 0.167   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.167   dual specificity phosphatase 4 isoform 2 
DUSP2                 0.164   dual specificity phosphatase 2 
DUSP5                 0.150   dual specificity phosphatase 5 
DUSP9                 0.147   dual specificity phosphatase 9 
DUSP22                0.139   dual specificity phosphatase 22 
DUSP19                0.136   dual specificity phosphatase 19 isoform 1 
DUSP18                0.136   dual specificity phosphatase 18 
SSH3                  0.136   slingshot homolog 3 
DUSP10                0.136   dual specificity phosphatase 10 isoform a 
DUSP16                0.133   dual specificity phosphatase 16 
DUSP21                0.128   dual specificity phosphatase 21 
DUSP15                0.122   dual specificity phosphatase 15 isoform a 
DUSP28                0.119   dual specificity phosphatase 28 
DUSP7                 0.117   dual specificity phosphatase 7 
SSH1                  0.117   slingshot 1 isoform 1 
SSH1                  0.117   slingshot 1 isoform 3 
SSH1                  0.117   slingshot 1 isoform 2 
SSH2                  0.114   slingshot 2 
DUSP10                0.114   dual specificity phosphatase 10 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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