Search of human proteins with 51243059

Search of human proteins with 51243059

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51243059 mitochondrial malonyltransferase isoform a
precursor [Homo sapiens]
         (390 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51243059 mitochondrial malonyltransferase isoform a precursor...   786   0.0  
gi|27477045 mitochondrial malonyltransferase isoform b precursor...   342   3e-94
gi|41872631 fatty acid synthase [Homo sapiens]                         49   1e-05
gi|121949746 family with sequence similarity 132, member A [Homo...    30   4.9  
gi|13186302 calpain 10 isoform a [Homo sapiens]                        29   6.4  
gi|122937321 UNC homeobox [Homo sapiens]                               29   6.4  
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              29   8.3  
gi|38045915 pregnancy-associated plasma protein A preproprotein ...    29   8.3  
gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens]      29   8.3  
gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens]      29   8.3  
gi|122937480 Ras association (RalGDS/AF-6) domain family (N-term...    29   8.3  

>gi|51243059 mitochondrial malonyltransferase isoform a precursor
           [Homo sapiens]
          Length = 390

 Score =  786 bits (2030), Expect = 0.0
 Identities = 390/390 (100%), Positives = 390/390 (100%)

Query: 1   MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG 60
           MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG
Sbjct: 1   MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG 60

Query: 61  QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 120
           QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC
Sbjct: 61  QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 120

Query: 121 QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAE 180
           QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAE
Sbjct: 121 QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAE 180

Query: 181 AMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISG 240
           AMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISG
Sbjct: 181 AMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISG 240

Query: 241 HQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSN 300
           HQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSN
Sbjct: 241 HQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSN 300

Query: 301 VHAHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKS 360
           VHAHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKS
Sbjct: 301 VHAHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKS 360

Query: 361 CNMQAWKSYSAVDVLQTLEHVDLDPQEPPR 390
           CNMQAWKSYSAVDVLQTLEHVDLDPQEPPR
Sbjct: 361 CNMQAWKSYSAVDVLQTLEHVDLDPQEPPR 390


>gi|27477045 mitochondrial malonyltransferase isoform b precursor
           [Homo sapiens]
          Length = 180

 Score =  342 bits (877), Expect = 3e-94
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG 60
           MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG
Sbjct: 1   MSVRVARVAWVRGLGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPG 60

Query: 61  QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 120
           QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC
Sbjct: 61  QCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 120

Query: 121 QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEG 171
           QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEG
Sbjct: 121 QPAIFVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEG 171


>gi|41872631 fatty acid synthase [Homo sapiens]
          Length = 2511

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 80/328 (24%), Positives = 123/328 (37%), Gaps = 45/328 (13%)

Query: 44  GAEEEAPWAATERRMPGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYA---AARRVLGY 100
           G  E     A ER +   CS     G G+Q  GMG  L+   R R+       A +  G 
Sbjct: 478 GGPEVQQVPAGERPLWFICS-----GMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGL 532

Query: 101 DLLELSLHGPQETLDRTVHCQPAIFVASLAAVEKLH--HLQPSVIENCVAAAGFSVGEFA 158
            + +L L   + T D  VH   ++    +  ++ L    L+P  I       G S+GE A
Sbjct: 533 KVSQLLLSTDESTFDDIVHSFVSLTAIQIGLIDLLSCMGLRPDGI------VGHSLGEVA 586

Query: 159 ALVFAGAMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSL 218
                G +   E + A   R + ++EA   +P G ++ +G        +  E ++ C   
Sbjct: 587 CGYADGCLSQEEAVLAAYWRGQCIKEAH--LPPGAMAAVG-------LSWEECKQRCPPG 637

Query: 219 GIENPVCEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAV 278
            +  P C  S     D   ISG Q  +    +   K       +     AFH+  ME   
Sbjct: 638 VV--PACHNSK----DTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIA 691

Query: 279 EPLTQALKAVDIKKP-------LVSVYSNVHAHRYRHPGHIHKLLAQQLVSPVKWEQTMH 331
            PL Q LK V I++P       L +       H         +     LVSPV +++ + 
Sbjct: 692 PPLLQELKKV-IREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALW 750

Query: 332 AIYERKKGRGFPQTFEVGPGRQLGAILK 359
            + E           E+ P   L A+LK
Sbjct: 751 HVPEH------AVVLEIAPHALLQAVLK 772


>gi|121949746 family with sequence similarity 132, member A [Homo
           sapiens]
          Length = 302

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 26  PVPPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCSVLLFPGQGSQVVG 76
           P  PPGA+  AE L       +E    ATERR  G    LL  G G ++VG
Sbjct: 104 PPGPPGAEVTAETLLHEF---QELLKEATERRFSGLLDPLLPQGAGLRLVG 151


>gi|13186302 calpain 10 isoform a [Homo sapiens]
          Length = 672

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 20/96 (20%)

Query: 9   AWVRGLGASYRRGASSFPVPP--------PGAQGVAELLRDATGAEEEAPWAATERRMPG 60
           AWV+G  A   R  S FP  P        P    +A L R    A   A WA   R + G
Sbjct: 345 AWVKGQSAGGCRNNSGFPSNPKFWLRVSEPSEVYIAVLQRSRLHA---ADWAGRARALVG 401

Query: 61  QC----SVLLFPGQGSQVVGM-----GRGLLNYPRV 87
                 S    PG+  Q VG+      +  +N PRV
Sbjct: 402 DSHTSWSPASIPGKHYQAVGLHLWKVEKRRVNLPRV 437


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 28  PPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCSVLLFPGQGS 72
           PPP A+G       A+GA   AP    E   PG C    +P Q S
Sbjct: 250 PPPAAKGPGA---HASGAAGTAPAPPGEPPAPGTCDPAFYPSQRS 291


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 13  GLGASYRRGASSFPVPPPG--AQGVAELLRDATGAEEEAPWAATERRMPGQCSVLLFPGQ 70
           G G+  R G +  P PP G   +GV    R  +G E  +P        P   S    PG 
Sbjct: 177 GGGSGEREGGAPQPPPPRGWRGKGVRAQQRGGSGGEGASP-------SPSSSSAGKTPGT 229

Query: 71  GSQVVGMG 78
           GS+  G G
Sbjct: 230 GSRNSGSG 237


>gi|38045915 pregnancy-associated plasma protein A preproprotein
           [Homo sapiens]
          Length = 1627

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 20  RGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCSVLLFPGQGSQV 74
           RG  + P PPP   G  E +R     ++     ATE   P     L F G+G Q+
Sbjct: 53  RGRRASPPPPPPPGGAWEAVRVPRRRQQREARGATEEPSP-PSRALYFSGRGEQL 106


>gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens]
          Length = 350

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 14 LGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCS 63
          +GA+   GA++ P PPP +      L  A  A EE P   +E   PG CS
Sbjct: 12 VGAAKTEGAAALPPPPPVS---PPALTPAPAAGEEGPAPLSETGAPG-CS 57


>gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens]
          Length = 275

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 14 LGASYRRGASSFPVPPPGAQGVAELLRDATGAEEEAPWAATERRMPGQCS 63
          +GA+   GA++ P PPP +      L  A  A EE P   +E   PG CS
Sbjct: 12 VGAAKTEGAAALPPPPPVS---PPALTPAPAAGEEGPAPLSETGAPG-CS 57


>gi|122937480 Ras association (RalGDS/AF-6) domain family
          (N-terminal) member 10 [Homo sapiens]
          Length = 615

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 10/54 (18%)

Query: 15 GASYRRGASSFPVPPP---------GAQGVAELLRDATGAEEEAPWAATERRMP 59
          GA+  RGA   P PP          G +G + + R  T     APWA  ERR P
Sbjct: 11 GAARLRGAGLGPEPPALPATALGLGGGKGWSHVGRSKT-RRSRAPWAEPERREP 63


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,160,539
Number of Sequences: 37866
Number of extensions: 745647
Number of successful extensions: 1750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1747
Number of HSP's gapped (non-prelim): 12
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.