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Search of human proteins with 51093874
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51093874 proline rich 19 [Homo sapiens]
(356 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51093874 proline rich 19 [Homo sapiens] 746 0.0
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 8e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 51 2e-06
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 51 2e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 4e-06
gi|47132519 Ras association and pleckstrin homology domains 1 is... 49 9e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 2e-05
gi|160707881 formin 2 [Homo sapiens] 48 2e-05
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 47 3e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 47 3e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 47 3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 4e-05
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 46 6e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 45 1e-04
gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens] 45 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 2e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 44 2e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 44 2e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 44 2e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 44 2e-04
gi|41281612 zinc finger protein 828 [Homo sapiens] 44 2e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 44 2e-04
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 44 3e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 43 4e-04
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 43 4e-04
>gi|51093874 proline rich 19 [Homo sapiens]
Length = 356
Score = 746 bits (1926), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MDTQGPVSQPFQQPEKPGRVRRRKTRRERNKALVGSRRPLAHHDPPVAIRDPPVVPTASK 60
MDTQGPVSQPFQQPEKPGRVRRRKTRRERNKALVGSRRPLAHHDPPVAIRDPPVVPTASK
Sbjct: 1 MDTQGPVSQPFQQPEKPGRVRRRKTRRERNKALVGSRRPLAHHDPPVAIRDPPVVPTASK 60
Query: 61 LVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRS 120
LVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRS
Sbjct: 61 LVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRS 120
Query: 121 RDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQA 180
RDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQA
Sbjct: 121 RDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQA 180
Query: 181 CHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFP 240
CHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFP
Sbjct: 181 CHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFP 240
Query: 241 MPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRP 300
MPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRP
Sbjct: 241 MPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRP 300
Query: 301 WGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPMRLY 356
WGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPMRLY
Sbjct: 301 WGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPMRLY 356
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 52.0 bits (123), Expect = 8e-07
Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 29/237 (12%)
Query: 99 SPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSLP 158
SP L PSP P P++ P + P PP+SP LS P
Sbjct: 600 SPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLS---------------P 644
Query: 159 QAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWINS 218
A P Q VH LQA P + P P P + P + +
Sbjct: 645 LATPSP---QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 701
Query: 219 PD-QVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAW 277
P QVP + + PM +++ P LA P PP P+ S +A
Sbjct: 702 PPLQVPP---------SPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT 752
Query: 278 GPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLP 334
PP LL + L P PP + P P P +P T L PSPP+ P
Sbjct: 753 PPPRVPPLLAAPPLQVPPSPPASLPMS-PLAKPPPQAPPALATPPLQALPSPPASFP 808
Score = 43.5 bits (101), Expect = 3e-04
Identities = 66/263 (25%), Positives = 90/263 (34%), Gaps = 46/263 (17%)
Query: 98 GSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSL 157
GSPTL A S +PR P PP SP L Q LSL
Sbjct: 419 GSPTLQATHS-----FLTMSPRQTQASLTSPSRPASTPPDSPPL----------QAPLSL 463
Query: 158 PQAFPRRNLIQDARDAI-----VHTLQACHGCVPDLALVLRGCQPPLPGA--KPGVSERK 210
P + P + + A + +H LQA +L Q PL P ++
Sbjct: 464 PASPPLQTSLSPAVSPLSSPLTIHPLQALS------SLASHSPQAPLSSLIMPPLETQSS 517
Query: 211 MTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLS 270
+ P + +P P + P T+S P PP P P +
Sbjct: 518 LAPPSLQTP---PASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPP---CPAPCPLQA 571
Query: 271 SPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPP 330
PS PP ++ +ATPPP P + P PS PL P + PP
Sbjct: 572 PPSPLTTPPP------ETPSSIATPPPQAPPALASPPLQGLPSPPLSPLAT------PPP 619
Query: 331 SPLPSLSWVVAQSSPEAWSFPPM 353
P L+ Q+ P + PP+
Sbjct: 620 QAPPXLALPPLQAPPSPPASPPL 642
Score = 43.1 bits (100), Expect = 4e-04
Identities = 75/289 (25%), Positives = 104/289 (35%), Gaps = 41/289 (14%)
Query: 91 SSGTLVPG-----SPTLPAKPSPSPGRAQEPAPRS-------RDKENQVPGGSGPGPPSS 138
+SGT PG + A+ + + G+A E RS RD PG P
Sbjct: 120 ASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR 179
Query: 139 PELSG--VGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACH-------GCVPDLA 189
+G VG + P PR+++ + + A G +
Sbjct: 180 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPAS 239
Query: 190 LVLRGCQPPLPG-AKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMP 248
L PL A+ G S R TP + P Q K +G + P
Sbjct: 240 RSLSSSATPLSSPARSGPSARG-TP-------RAPAHPSQPKPKGLQALRPPQV------ 285
Query: 249 TAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQP 308
T R AP GP + SPSGT P D + L AT PP P LP
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATP-LPATLPPSPPLATPLPLA 344
Query: 309 LPQPSSPLLPRTSVLDWSP-SPPSPL-PSLSWVVAQSSPEAWSFPPMRL 355
P PS+P P L P +PPS PS++ Q+ P + PP+++
Sbjct: 345 PPSPSAP--PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQV 391
Score = 36.6 bits (83), Expect = 0.035
Identities = 80/299 (26%), Positives = 100/299 (33%), Gaps = 68/299 (22%)
Query: 96 VPGSPTLPAKPSPSPGRAQEPA--PRSRDKENQVPGGSGPGPPSSPELS---GVGQLLA- 149
VP SP PA P SP P P QVP PP SP + V LLA
Sbjct: 706 VPPSP--PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAA 763
Query: 150 -ELQCQLSLPQAFPRRNLIQDARDA----IVHTLQACHG----------CVPDLALVLRG 194
LQ S P + P L + A LQA P +L +
Sbjct: 764 PPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823
Query: 195 CQPPLPGAKPGVSE--RKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHR 252
P P A P ++ ++ P SP P + R+ P P + + R
Sbjct: 824 LATPPPQAPPVLAAPLLQVPP----SPPASPTLQAPRRP--------PTPGPDTSVSGPR 871
Query: 253 GSLAPPRGPWPPYFPSLSSPSGTAWGPPTA---------------FDLLKSIWLVATPPP 297
+LA GP PP PS SPS T GP A +D A+PPP
Sbjct: 872 LTLALAPGPPPP--PS-RSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP 928
Query: 298 --------PRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSP-PSPLPSLSWVVAQSSPEA 347
P W G PL +P P L W P+ P L + PE+
Sbjct: 929 DAELAACHPAAWSRGPAPPLAFRGAPGAP----LPWPPATGPGSADGLCTIYETEGPES 983
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 50.8 bits (120), Expect = 2e-06
Identities = 43/126 (34%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 240 PMPYTSSMPTAHRGSLAPPRGPWPPYFPS-------LSSPSGTAWGPPTAFDLLKSIWLV 292
P P S+ P PP P PP P S P GTA PP +I
Sbjct: 591 PAPGDSTTPPP-----PPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI--- 642
Query: 293 ATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWS---PSPPSPLPSLSWVVAQSSP---E 346
PPPP P GVG+P P P +P L S P PP PLP + + P E
Sbjct: 643 -PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 701
Query: 347 AWSFPP 352
A PP
Sbjct: 702 AGMPPP 707
Score = 44.7 bits (104), Expect = 1e-04
Identities = 66/281 (23%), Positives = 88/281 (31%), Gaps = 72/281 (25%)
Query: 80 EVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSP 139
E+ SL A + ++ +P PA P P P P + P P PP P
Sbjct: 552 EMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP 611
Query: 140 ELSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPL 199
GV C +S P + P I + +P + G P
Sbjct: 612 LPGGV--------C-ISSPPSLPGGTAISPPPPL------SGDATIPPPPPLPEGVGIPS 656
Query: 200 PGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPR 259
P + PG + I P +P G+ P P P + PP
Sbjct: 657 PSSLPGGTA-------IPPPPPLP---------GSARIPPPPP-----PLPGSAGIPPPP 695
Query: 260 GPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPR 319
P P G A PP PPPP P G G+P P P P P +P
Sbjct: 696 PPLP----------GEAGMPP--------------PPPPLPGGPGIPPPPPFPGGPGIP- 730
Query: 320 TSVLDWSPSPPS----PLPSLSWVVAQSSPEAWSFPPMRLY 356
P PP P P + V + + P +LY
Sbjct: 731 -------PPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLY 764
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 50.8 bits (120), Expect = 2e-06
Identities = 43/126 (34%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 240 PMPYTSSMPTAHRGSLAPPRGPWPPYFPS-------LSSPSGTAWGPPTAFDLLKSIWLV 292
P P S+ P PP P PP P S P GTA PP +I
Sbjct: 600 PAPGDSTTPPP-----PPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATI--- 651
Query: 293 ATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWS---PSPPSPLPSLSWVVAQSSP---E 346
PPPP P GVG+P P P +P L S P PP PLP + + P E
Sbjct: 652 -PPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 710
Query: 347 AWSFPP 352
A PP
Sbjct: 711 AGMPPP 716
Score = 44.7 bits (104), Expect = 1e-04
Identities = 66/281 (23%), Positives = 88/281 (31%), Gaps = 72/281 (25%)
Query: 80 EVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSP 139
E+ SL A + ++ +P PA P P P P + P P PP P
Sbjct: 561 EMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP 620
Query: 140 ELSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPL 199
GV C +S P + P I + +P + G P
Sbjct: 621 LPGGV--------C-ISSPPSLPGGTAISPPPPL------SGDATIPPPPPLPEGVGIPS 665
Query: 200 PGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPR 259
P + PG + I P +P G+ P P P + PP
Sbjct: 666 PSSLPGGTA-------IPPPPPLP---------GSARIPPPPP-----PLPGSAGIPPPP 704
Query: 260 GPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPR 319
P P G A PP PPPP P G G+P P P P P +P
Sbjct: 705 PPLP----------GEAGMPP--------------PPPPLPGGPGIPPPPPFPGGPGIP- 739
Query: 320 TSVLDWSPSPPS----PLPSLSWVVAQSSPEAWSFPPMRLY 356
P PP P P + V + + P +LY
Sbjct: 740 -------PPPPGMGMPPPPPFGFGVPAAPVLPFGLTPKKLY 773
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 49.7 bits (117), Expect = 4e-06
Identities = 64/268 (23%), Positives = 91/268 (33%), Gaps = 44/268 (16%)
Query: 95 LVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQ 154
L P TLP K +P+P P P+ G + P P +P LS
Sbjct: 873 LSPKGVTLPPKETPTPSVVNLPFPKE--------GPATPAPKQAPALS------------ 912
Query: 155 LSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPF 214
+ + P++ A I + P A PP P P +P
Sbjct: 913 --MTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT------PPSPKGGPATP----SPK 960
Query: 215 WINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAP-PRGPWPPYFPSLSSPS 273
W +P + P P ++ P+ G P P+G P P+++ PS
Sbjct: 961 WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP--PAVTPPS 1018
Query: 274 GTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLL--------PRTSVLDW 325
T F S ATPP P+ P P P++P P T L
Sbjct: 1019 PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKG 1078
Query: 326 SPSPPSPL-PSLSWVVAQSSPEAWSFPP 352
+P+PP+ PS A SP+ PP
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPP 1106
Score = 47.8 bits (112), Expect = 2e-05
Identities = 66/248 (26%), Positives = 92/248 (37%), Gaps = 42/248 (16%)
Query: 98 GSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGP-PSSPELSGVGQLLAELQCQLS 156
G PTLPA PSP + PAP+ QV S P P++P G L A +
Sbjct: 1463 GDPTLPAVTPPSP--KEPPAPK------QVATSSSPKKAPATPAPMGAPTLPAVIPSSPK 1514
Query: 157 LPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWI 216
A P A A + + + P AL+ P P P + K P
Sbjct: 1515 EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATP 1574
Query: 217 NSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTA 276
+S KE + P T P+ ++G+ +P PP +++SPS
Sbjct: 1575 SS----------------KEASSPPAVT---PSTYKGAPSPKELLIPP---AVTSPSPKE 1612
Query: 277 WGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSL 336
P A TPP P G P P P+SP + +S+ D SP S +
Sbjct: 1613 APTPPA----------VTPPSPEK-GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661
Query: 337 SWVVAQSS 344
V Q+S
Sbjct: 1662 GATVPQAS 1669
Score = 37.7 bits (86), Expect = 0.016
Identities = 62/243 (25%), Positives = 84/243 (34%), Gaps = 45/243 (18%)
Query: 98 GSPTLPAKPSPSP-GRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLS 156
G+PT PA PSP G P+P+ S G P++P G A L
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275
Query: 157 LPQAFPRRNLIQDARDAIVHTLQACHG----CVPDLALVLRGCQPPLPGAKPGVSERKMT 212
A P + A + V T + G P A PP P PG K
Sbjct: 1276 GGLATPPH---KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332
Query: 213 PFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSP 272
P P +GT P + PT + + GP PP ++P
Sbjct: 1333 P--------TPPAVTPPSPKGTPTLPATTPSSKGGPT----TPSSKEGPTPP----AATP 1376
Query: 273 SGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSP--SPP 330
S GP TPP P+ G +P P P+SP +V+ SP +P
Sbjct: 1377 SHKG-GP------------AMTPPSPKR-GPAIPSPKGDPTSP-----AVIPLSPKKAPA 1417
Query: 331 SPL 333
+P+
Sbjct: 1418 TPV 1420
Score = 36.6 bits (83), Expect = 0.035
Identities = 61/253 (24%), Positives = 82/253 (32%), Gaps = 40/253 (15%)
Query: 98 GSPTLPAKPSPSP-GRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLS 156
G+PT PA PSP G P+P+ S G ++P G A +
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA------A 1223
Query: 157 LPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWI 216
P + P+ L + P A PP P P K P
Sbjct: 1224 TPPS-PKGGLATPS---------------PKGAPTTPAATPPSPKGGPATPPPKGAP--- 1264
Query: 217 NSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRG-SLAPPRGPWPPYFPSLSSPSGT 275
+P + P P + P+ G + +PP+G P + SP G+
Sbjct: 1265 -TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS 1323
Query: 276 AWGPPTAFDLLKSIWLVATPP---PPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
PP TPP PP P G P PSS P T P+PP+
Sbjct: 1324 PGTPPPKG--------APTPPAVTPPSPKGTPT-LPATTPSSKGGPTTPSSKEGPTPPAA 1374
Query: 333 LPSLSWVVAQSSP 345
PS A + P
Sbjct: 1375 TPSHKGGPAMTPP 1387
Score = 35.0 bits (79), Expect = 0.10
Identities = 60/258 (23%), Positives = 83/258 (32%), Gaps = 33/258 (12%)
Query: 98 GSPTLPAKPSPSP-GRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLS 156
G+PT PA PSP G P+P+ S G P++P G A
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPS-- 995
Query: 157 LPQAFPRRNLIQDARDAIVHTLQACHGC-----VPDLALVLRGCQPPLPGAKPGVSERKM 211
P+ P + A T + G P A PP P P
Sbjct: 996 -PKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA----- 1049
Query: 212 TPFWINSPDQ----VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFP 267
TP +P +P + K P T P + +P P PP
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAAT 1109
Query: 268 SLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSP 327
S G A P + ATPP P+ G+ P P P++P +
Sbjct: 1110 PPSPKGGLATPPHKGAPTTPA----ATPPSPKG-GLATPPPKGAPTTP----------AA 1154
Query: 328 SPPSPLPSLSWVVAQSSP 345
+PPSP L+ + +P
Sbjct: 1155 TPPSPKGGLATPPPKGAP 1172
Score = 31.2 bits (69), Expect = 1.5
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 245 SSMPTAHRGSLAPPRGPWPPYFPSLSSPS---GTAWGPPTAFDLLKSIWLVATPPPPRPW 301
++ P + +G LA P P P+ + PS G A P + ATPP P+
Sbjct: 1199 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA----ATPPSPKG- 1253
Query: 302 GVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPE 346
G P P P+ P S+ +PP VV SP+
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK 1298
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 48.5 bits (114), Expect = 9e-06
Identities = 58/252 (23%), Positives = 88/252 (34%), Gaps = 34/252 (13%)
Query: 88 RLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQL 147
++++ T SP LP P P P P P +Q +G P + S + +L
Sbjct: 614 KIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRL 673
Query: 148 LAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVS 207
Q +L + P + ++ L +G VP PP P PG +
Sbjct: 674 QNASQHSGALFK--PPTPPVMQSQSVKPQILVPPNGVVPP-------PPPPPPPPTPGSA 724
Query: 208 ERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFP 267
++ P +P +F+ P P H +APP P PP P
Sbjct: 725 MAQLKP--APCAPSLP------------QFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 770
Query: 268 SLSSPSG-----TAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSV 322
+ P PT+ + + A PP P P P P P P P + +
Sbjct: 771 APLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTP-----PVP-PAKKQPAFPASYI 824
Query: 323 LDWSPSPPSPLP 334
P+PP P+P
Sbjct: 825 PPSPPTPPVPVP 836
Score = 42.7 bits (99), Expect = 5e-04
Identities = 79/321 (24%), Positives = 118/321 (36%), Gaps = 60/321 (18%)
Query: 45 PPVAIRDPPVVPTASKLVV----ITQGRLSREHRG-LFNHEVKSLDVARLLSSGTLVPGS 99
PP+ + P +A+ + V IT+ + + +H G LF + ++ + LVP +
Sbjct: 647 PPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPN 706
Query: 100 ----PTLPAKPSPSPGRAQ---EPAPRSRDKENQVPGGSGPGPPSS-PELSGVGQLLAEL 151
P P P P+PG A +PAP + +P S P PP ++ + Q+
Sbjct: 707 GVVPPPPPPPPPPTPGSAMAQLKPAPCAPS----LPQFSAPPPPLKIHQVQHITQVAPPT 762
Query: 152 Q-----CQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGV 206
LP P + L+ T+ A V+ PP P P V
Sbjct: 763 PPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTV----------APVVTQAAPPTP--TPPV 810
Query: 207 SERKMTPFWINS--PDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPP 264
K P + S P P T P P ++P PP P P
Sbjct: 811 PPAKKQPAFPASYIPPSPP----------TPPVPVPPP---TLPKQQSFCAKPPPSPLSP 857
Query: 265 YFPSLSSPSGTAWGPPTAFDLLKSIWL------VATPPPP----RPWGVGLPQPLPQPSS 314
PS+ + + PP ++S L VA PP +P P+P P
Sbjct: 858 V-PSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDF 916
Query: 315 PLLPRTSVLDWSPSPPSPLPS 335
P P S L + P PPSP+P+
Sbjct: 917 PPPPPESSLVFPPPPPSPVPA 937
Score = 38.1 bits (87), Expect = 0.012
Identities = 78/310 (25%), Positives = 101/310 (32%), Gaps = 68/310 (21%)
Query: 97 PGSPTLPAKPSPSPGRAQE---------------------------PAPRSRDKENQV-- 127
P P LP++ +PS G A P +S+ + Q+
Sbjct: 644 PPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILV 703
Query: 128 -PGGSGPGPPSSPELSGVGQLLAELQ---CQLSLPQ--AFPRRNLIQDARDAIVHTLQAC 181
P G P PP P G +A+L+ C SLPQ A P I + H Q
Sbjct: 704 PPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQ----HITQVA 759
Query: 182 HGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPM 241
P PP+P P + K I +P Q T P+
Sbjct: 760 PPTPPP--------PPPIPAPLPPQAPPKPL-VTIPAPTSTKTVAPVVTQAAPPTPTPPV 810
Query: 242 PYTSSMPTAHRGSLAPPRGPWPPY-FPSLSSP---SGTAWGPPTAFD----LLKSIWLVA 293
P P A S PP P PP P + P S A PP+ ++K I
Sbjct: 811 PPAKKQP-AFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQF 869
Query: 294 TPPPPRPWGVGLP-QPLPQPSSPLLPRT--SVLDWSPSP--------PSPLPSLSWVVAQ 342
PPP P P +P+P +P P + W PS P P P S V
Sbjct: 870 PPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPP 929
Query: 343 SSPEAWSFPP 352
P PP
Sbjct: 930 PPPSPVPAPP 939
Score = 35.0 bits (79), Expect = 0.10
Identities = 34/104 (32%), Positives = 35/104 (33%), Gaps = 48/104 (46%)
Query: 254 SLAPPRGPWP----PYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPL 309
SL PP P P PY S SP PPPP P P
Sbjct: 604 SLVPPLSPQPKIVTPYTASQPSPP--------------------LPPPP-------PPPP 636
Query: 310 PQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPM 353
P P P P PP PLPS QS+P A S PM
Sbjct: 637 PPPPPP-----------PPPPPPLPS------QSAPSAGSAAPM 663
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.8 bits (112), Expect = 2e-05
Identities = 75/275 (27%), Positives = 97/275 (35%), Gaps = 29/275 (10%)
Query: 91 SSGTLVPGSPTLPAK----PSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQ 146
S T GSPTL A PSP P P++ P + P PP+SP LS +
Sbjct: 363 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT 422
Query: 147 LLAE---------LQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQP 197
+ LQ S P + P + V P P
Sbjct: 423 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 482
Query: 198 PLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAP 257
P P A P +S TP P Q P Q K P ++ T +L
Sbjct: 483 PSPPASPPMSP-SATP-----PPQAPPPLAAPPLQLAKP---PPQAPPALATPPLQALPS 533
Query: 258 PRGPWP---PYFPSLSSP-SGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQ--PLPQ 311
P +P P+ PS S P S A PP A +L + L P PP + P+ P P
Sbjct: 534 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG 593
Query: 312 PSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPE 346
P + + L +P PP P PS S S P+
Sbjct: 594 PDTSVSGPRLTLALAPGPPPP-PSRSPSSTLSGPD 627
Score = 43.1 bits (100), Expect = 4e-04
Identities = 44/150 (29%), Positives = 59/150 (39%), Gaps = 22/150 (14%)
Query: 197 PPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPT--AHRGS 254
PP A P + +P SP + + T P++SS+ A
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPAT-------PHSSSLTCQLATPLP 339
Query: 255 LAPPRGPWPPYFPSLSSPSGT-------AWGPPT-----AFDLLKSIWLVATPPPPRPWG 302
LAPP PP +L SP T + G PT +F + +ATPPP P
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 399
Query: 303 VGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
+ LP PS P P S L +PSP +P
Sbjct: 400 LALPPLQAPPSPPASPPLSPLA-TPSPQAP 428
Score = 38.1 bits (87), Expect = 0.012
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 242 PYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAW--GPPTAFDLLKSIWLVATPP--P 297
P + P+A S APP P P+ SL+ T PP+ S+ + +PP P
Sbjct: 303 PLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSP-SAPPSLQTLPSPPATP 361
Query: 298 PRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPM 353
P L P Q + LP + + PP P+L+ Q+ P + PP+
Sbjct: 362 PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPL 417
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 47.8 bits (112), Expect = 2e-05
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 240 PMPYT---SSMPTAHRGSLAPPRGPWP----PYFPSLSSPSGTAWGPPTAFDLLKSIWLV 292
P+P T SSMP G + PP P P P PS + P PP L+ ++
Sbjct: 860 PLPCTESSSSMPGL--GMVPPPPPPLPGMTVPTLPSTAIPQ-----PPP----LQGTEML 908
Query: 293 ATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLP 334
PPPP P G G+P P P P + +LP + PP PLP
Sbjct: 909 PPPPPPLP-GAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLP 949
Score = 43.5 bits (101), Expect = 3e-04
Identities = 77/318 (24%), Positives = 106/318 (33%), Gaps = 76/318 (23%)
Query: 71 REHRGLFNHEVKSLDVARLLSSGTL-VPGSPTLPAKPSPSPGRAQEP------------A 117
R HR L E KS+ + G L +P LP +P PG P +
Sbjct: 734 RHHRIL---EAKSIQTSPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVS 790
Query: 118 PR--SRDKENQVPGGSGPGPPSSPEL---SGVGQLLAELQCQLSLPQAFPRRNLIQDARD 172
PR S ++ P S PP P L +G GQ P + P ++ + +
Sbjct: 791 PRRISVQLDSHQPTQSISQPPPPPSLLWSAGQGQ-----------PGSQPPHSISTEFQT 839
Query: 173 AIVHTLQAC--HGC----------------VPDLALVLRGCQPPLPGAKPGVSERKMTPF 214
+ H++ + + C +P L +V PP P PG++ +
Sbjct: 840 SHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMV-----PPPPPPLPGMTVPTLPST 894
Query: 215 WINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSG 274
I P + QGT+ P P P G PP P P P
Sbjct: 895 AIPQPPPL---------QGTEMLPPPPP-----PLPGAGIPPPPPLPGAGILPLPPLPGA 940
Query: 275 TAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLP 334
PP A PPPP G G+P P P P + + P + PP PLP
Sbjct: 941 GIPPPPPLPG-------AAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLP 993
Query: 335 SLSWVVAQSSPEAWSFPP 352
P A PP
Sbjct: 994 GAGIPPPPPLPGAGIPPP 1011
Score = 40.8 bits (94), Expect = 0.002
Identities = 88/380 (23%), Positives = 115/380 (30%), Gaps = 59/380 (15%)
Query: 10 PFQQPEKPGRVRRRKTRRERNKALVGSRRPLA----HHDPPVAIRDPPVVPTASKLVVIT 65
P + P PG +T+ +L+ S R ++ H P +I PP P S L
Sbjct: 764 PGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPP--PPPSLLWSAG 821
Query: 66 QGR--------LSREHRGLFNHEVKSL----------DVARLLSSGTLVPGSPTLPAKPS 107
QG+ +S E + H V S S + +PG +P P
Sbjct: 822 QGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPP 881
Query: 108 PSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFPRRNLI 167
P PG P + + G+ PP P L G G + P P ++
Sbjct: 882 PLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAG---------IPPPPPLPGAGIL 932
Query: 168 Q--DARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPF---WINSPDQV 222
A + G L G PLP PG P I P +
Sbjct: 933 PLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPL 992
Query: 223 PEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW-----PPYFPSLSSPS---- 273
P P P P G PP P PP P P
Sbjct: 993 PGAGIPPPPPLPGAGIPPPP-----PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1047
Query: 274 -GTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
G PP PPPP G G+P P P P + + P + PP P
Sbjct: 1048 PGAGIPPPPPLPG------AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1101
Query: 333 LPSLSWVVAQSSPEAWSFPP 352
LP + P A PP
Sbjct: 1102 LPGVGIPPPPPLPGAGIPPP 1121
Score = 37.4 bits (85), Expect = 0.021
Identities = 29/97 (29%), Positives = 34/97 (35%), Gaps = 11/97 (11%)
Query: 261 PWPPYFPSLSSPS-----GTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSP 315
P PP P P G PP V PPPP G G+P P P P +
Sbjct: 1119 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPR------VGIPPPPPLPGAGIPPPPPLPGAG 1172
Query: 316 LLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPP 352
+ P + PP PLP + P A PP
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPP 1209
Score = 37.4 bits (85), Expect = 0.021
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 295 PPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSP 345
PPPP P GVG+P P P P + P + PP PLP + A + P
Sbjct: 1175 PPPPLP-GVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPP 1224
Score = 37.0 bits (84), Expect = 0.027
Identities = 67/273 (24%), Positives = 79/273 (28%), Gaps = 70/273 (25%)
Query: 93 GTLVPGSPTLPAK----PSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLL 148
G +P P LP P P PG P P +PG P PP P G G
Sbjct: 950 GAAIPPPPPLPGAGIPLPPPLPGAGIPPPP-------PLPGAGIPPPPPLP---GAG--- 996
Query: 149 AELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSE 208
+ P P G P L G PP P G+
Sbjct: 997 ------IPPPPPLPGA------------------GIPPPPPLPGAGIPPPPPLPGAGIPP 1032
Query: 209 RKMTP-FWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRG---PWPP 264
P I P +P +P +P A P G P PP
Sbjct: 1033 PPPLPGAGIPPPPPLPGAG--------------IPPPPPLPGAGIPPPPPLPGAGIPPPP 1078
Query: 265 YFPSLSSPS-----GTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPR 319
P P G PP V PPPP G G+P P P P + + P
Sbjct: 1079 PLPGAGIPPPPPLPGAGIPPPPPLPG------VGIPPPPPLPGAGIPPPPPLPGAGIPPP 1132
Query: 320 TSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPP 352
+ PP PLP + P A PP
Sbjct: 1133 PPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1165
Score = 35.0 bits (79), Expect = 0.10
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 292 VATPPPPRPWGVGLPQPLPQPSSPLLPRTSV--LDWSPSPPSPLP 334
V PPPP GVG+P P P P + + P + + P+P PLP
Sbjct: 1182 VGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLP 1226
Score = 34.7 bits (78), Expect = 0.13
Identities = 62/247 (25%), Positives = 75/247 (30%), Gaps = 83/247 (33%)
Query: 93 GTLVPGSPTLPAK----PSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLL 148
G +P P LP P P PG P P +PG P PP P GVG
Sbjct: 1060 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-------PLPGAGIPPPPPLP---GVG--- 1106
Query: 149 AELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSE 208
+ P P G P L G PP P G+
Sbjct: 1107 ------IPPPPPLPGA------------------GIPPPPPLPGAGIPPPPPLPGAGIPP 1142
Query: 209 RKMTP-FWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFP 267
P I P +P +P +P G+ PP PP P
Sbjct: 1143 PPPLPRVGIPPPPPLPGAG--------------IPPPPPLP----GAGIPP----PPPLP 1180
Query: 268 SLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSP 327
+ P PP V PPPP G G+P P P P + P +P
Sbjct: 1181 GVGIP------PPPPLPG------VGIPPPPPLPGAGIPPPPPLPGMGIPP-------AP 1221
Query: 328 SPPSPLP 334
+PP P P
Sbjct: 1222 APPLPPP 1228
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 46.6 bits (109), Expect = 3e-05
Identities = 74/274 (27%), Positives = 89/274 (32%), Gaps = 46/274 (16%)
Query: 97 PGSPTLPAKPSPSPGRAQEPAPR-SRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQL 155
P P P P P Q PA R P P PP P GQ A Q
Sbjct: 231 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQP 290
Query: 156 SLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFW 215
L P H+LQA +L+ PP P P + + P
Sbjct: 291 PLHGQGPPGP----------HSLQA--------GPLLQHPGPPQPFGLPPQASQGQAPLG 332
Query: 216 INSPDQVPEQERQ--------RKQQGTKEFTFP-----MPYTSSMPTAHRGSLAPPRGPW 262
+ P Q + QQ +E P MP+ PT L P+
Sbjct: 333 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 392
Query: 263 PPYFPSLSSPSGTAWG----PPTAFDLLKSIWLVATP---PPPRPWGVGLPQPLPQPSSP 315
P P LS PS + PP A L S+ P PPP +PQ P PSSP
Sbjct: 393 HP--PHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL---MPQSQPLPSSP 447
Query: 316 LLP--RTSVLDWSPSPPSPLPSLSWVVAQSSPEA 347
P T + P P S P+ VA P A
Sbjct: 448 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA 481
Score = 28.9 bits (63), Expect = 7.4
Identities = 37/136 (27%), Positives = 43/136 (31%), Gaps = 32/136 (23%)
Query: 196 QPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSL 255
QPP A GV TP +P P GT + P P S+ +GS
Sbjct: 183 QPPALQAPTGV-----TP----APSSAPP--------GTPQLPTPGPTPSATAVPPQGSP 225
Query: 256 APPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSP 315
+ P P P+ P P PP P P P P P P
Sbjct: 226 TASQAPNQPQAPTAPVPHTHIQQAPALHP--------QRPPSPHP------PPHPSPHPP 271
Query: 316 LLPRTSVLDWSPSPPS 331
L P T PS PS
Sbjct: 272 LQPLTGSAG-QPSAPS 286
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 74/274 (27%), Positives = 89/274 (32%), Gaps = 46/274 (16%)
Query: 97 PGSPTLPAKPSPSPGRAQEPAPR-SRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQL 155
P P P P P Q PA R P P PP P GQ A Q
Sbjct: 785 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQP 844
Query: 156 SLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFW 215
L P H+LQA +L+ PP P P + + P
Sbjct: 845 PLHGQGPPGP----------HSLQA--------GPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 216 INSPDQVPEQERQ--------RKQQGTKEFTFP-----MPYTSSMPTAHRGSLAPPRGPW 262
+ P Q + QQ +E P MP+ PT L P+
Sbjct: 887 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 263 PPYFPSLSSPSGTAWG----PPTAFDLLKSIWLVATP---PPPRPWGVGLPQPLPQPSSP 315
P P LS PS + PP A L S+ P PPP +PQ P PSSP
Sbjct: 947 HP--PHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL---MPQSQPLPSSP 1001
Query: 316 LLP--RTSVLDWSPSPPSPLPSLSWVVAQSSPEA 347
P T + P P S P+ VA P A
Sbjct: 1002 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA 1035
Score = 28.9 bits (63), Expect = 7.4
Identities = 37/136 (27%), Positives = 43/136 (31%), Gaps = 32/136 (23%)
Query: 196 QPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSL 255
QPP A GV TP +P P GT + P P S+ +GS
Sbjct: 737 QPPALQAPTGV-----TP----APSSAPP--------GTPQLPTPGPTPSATAVPPQGSP 779
Query: 256 APPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSP 315
+ P P P+ P P PP P P P P P P
Sbjct: 780 TASQAPNQPQAPTAPVPHTHIQQAPALHP--------QRPPSPHP------PPHPSPHPP 825
Query: 316 LLPRTSVLDWSPSPPS 331
L P T PS PS
Sbjct: 826 LQPLTGSAG-QPSAPS 840
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 74/274 (27%), Positives = 89/274 (32%), Gaps = 46/274 (16%)
Query: 97 PGSPTLPAKPSPSPGRAQEPAPR-SRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQL 155
P P P P P Q PA R P P PP P GQ A Q
Sbjct: 785 PNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQP 844
Query: 156 SLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFW 215
L P H+LQA +L+ PP P P + + P
Sbjct: 845 PLHGQGPPGP----------HSLQA--------GPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 216 INSPDQVPEQERQ--------RKQQGTKEFTFP-----MPYTSSMPTAHRGSLAPPRGPW 262
+ P Q + QQ +E P MP+ PT L P+
Sbjct: 887 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 263 PPYFPSLSSPSGTAWG----PPTAFDLLKSIWLVATP---PPPRPWGVGLPQPLPQPSSP 315
P P LS PS + PP A L S+ P PPP +PQ P PSSP
Sbjct: 947 HP--PHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL---MPQSQPLPSSP 1001
Query: 316 LLP--RTSVLDWSPSPPSPLPSLSWVVAQSSPEA 347
P T + P P S P+ VA P A
Sbjct: 1002 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA 1035
Score = 28.9 bits (63), Expect = 7.4
Identities = 37/136 (27%), Positives = 43/136 (31%), Gaps = 32/136 (23%)
Query: 196 QPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSL 255
QPP A GV TP +P P GT + P P S+ +GS
Sbjct: 737 QPPALQAPTGV-----TP----APSSAPP--------GTPQLPTPGPTPSATAVPPQGSP 779
Query: 256 APPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSP 315
+ P P P+ P P PP P P P P P P
Sbjct: 780 TASQAPNQPQAPTAPVPHTHIQQAPALHP--------QRPPSPHP------PPHPSPHPP 825
Query: 316 LLPRTSVLDWSPSPPS 331
L P T PS PS
Sbjct: 826 LQPLTGSAG-QPSAPS 840
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 46.2 bits (108), Expect = 4e-05
Identities = 77/300 (25%), Positives = 101/300 (33%), Gaps = 44/300 (14%)
Query: 90 LSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKEN----------QVPGGSGPGPPSSP 139
LSS L SP+ P PS P P+P + Q P PP SP
Sbjct: 290 LSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP 349
Query: 140 ELSGVGQ-----LLAELQCQLSLPQAFPRRNLIQDARDA----IVHTLQACHGCVPDLAL 190
+ Q L LQ S P + P L + A VH LQA P +
Sbjct: 350 LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 409
Query: 191 VLRGCQPPLPGAKPGVSERKMTPFWINSPD-QVPEQ---ERQRKQQGTKEFTFPMPYTS- 245
P P P + P + +P QVP T P P +
Sbjct: 410 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469
Query: 246 -------------SMPTAHRGSLAPPRGPWP---PYFPSLSSP-SGTAWGPPTAFDLLKS 288
++ T +L P +P P+ PS S P S A PP A +L +
Sbjct: 470 PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529
Query: 289 IWLVATPPPPRPWGVGLPQ--PLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPE 346
L P PP + P+ P P P + + L +P PP P PS S S P+
Sbjct: 530 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP-PSRSPSSTLSGPD 588
Score = 42.0 bits (97), Expect = 8e-04
Identities = 78/280 (27%), Positives = 98/280 (35%), Gaps = 74/280 (26%)
Query: 91 SSGTLVPGSPTLPAK----PSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQ 146
S T GSPTL A PSP P P++ P + P PP+SP LS
Sbjct: 324 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS---- 379
Query: 147 LLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGV 206
P A P Q VH LQA P P P V
Sbjct: 380 -----------PLATPSP---QAPNALAVHLLQA----------------PFSPPPSPPV 409
Query: 207 SERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYF 266
PF SP P P+ +++ P+ SLA P PP
Sbjct: 410 Q----APF---SPPASP----------------PVSPSATPPSQAPPSLAAPPLQVPPSP 446
Query: 267 PSLSSPSGTAWGPPTAFDLLKSIWL-VATPPPPRPWGVGLP--QPLPQP------SSPLL 317
P+ S +A PP A L + L +A PPP P + P Q LP P +P
Sbjct: 447 PASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS 506
Query: 318 PRTSVLDWSP---SPPSPLPSLSWVVAQSSPEAWSFPPMR 354
P S L SP PP P L+ + Q P + P ++
Sbjct: 507 PSAS-LPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 545
Score = 37.4 bits (85), Expect = 0.021
Identities = 78/344 (22%), Positives = 118/344 (34%), Gaps = 62/344 (18%)
Query: 26 RRERNKALVGSRRPLAHHD------PPVAIRDPPVVPTASKLVVITQGRLSREHRGLFNH 79
+R++ KA +R P A PP + R PP V A+ V+ G + R+
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKP------ 57
Query: 80 EVKSLDVARLLSSGTLVPGSPTLP-AKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSS 138
L+ G T+P + P P R P R + + PGP SS
Sbjct: 58 ----------LAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSS 107
Query: 139 P-ELSGVGQ--LLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGC 195
P SG + L + ++S + R + + + + A R
Sbjct: 108 PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALS------------AGARRDT 155
Query: 196 QPPLPGA-KPGVSER-KMTPFWINSPDQVPEQERQRKQQGTKE---------FTFPMPYT 244
P PG P ++ R + + P P + +G ++ T P P
Sbjct: 156 SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA 215
Query: 245 SSMPTAHRGSLAPPRGPWPPYFPSLSSPS---GTAWGPPTAFDLLKSIWLVATPPPPRPW 301
P+A G P LSSP+ +A G P A A P P+P
Sbjct: 216 RRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRA---------PAHPSQPKPK 266
Query: 302 GVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSP 345
G+ +P PQ + P L S P PS S + S+P
Sbjct: 267 GLQALRP-PQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP 309
Score = 35.4 bits (80), Expect = 0.079
Identities = 68/287 (23%), Positives = 102/287 (35%), Gaps = 43/287 (14%)
Query: 91 SSGTLVPG-----SPTLPAKPSPSPGRAQEPAPRS-------RDKENQVPGGSGPGPPSS 138
+SGT PG + A+ + + G+A E RS RD PG P
Sbjct: 111 ASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARR 170
Query: 139 PELSG--VGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACH-------GCVPDLA 189
+G VG + P PR+++ + + A G +
Sbjct: 171 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPAS 230
Query: 190 LVLRGCQPPLPG-AKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMP 248
L PL A+ G S R TP + P Q K +G + P
Sbjct: 231 RSLSSSATPLSSPARSGPSARG-TP-------RAPAHPSQPKPKGLQALRPPQV------ 276
Query: 249 TAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPP--PPRPWGVGLP 306
T R AP GP L++PS +A P+A L+++ +PP PP L
Sbjct: 277 TPPRKDAAPALGPLSS--SPLATPSPSAPPSPSAPPSLQTL---PSPPATPPSQATTSLG 331
Query: 307 QPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSFPPM 353
P Q + LP + + PP P+L+ Q+ P + PP+
Sbjct: 332 SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPL 378
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 45.8 bits (107), Expect = 6e-05
Identities = 79/300 (26%), Positives = 105/300 (35%), Gaps = 81/300 (27%)
Query: 99 SPTLPAKPSP---SPGRAQEPAPRSRDKENQVPGGSGPGPPSSPELSGVGQLLAELQCQL 155
SPTL SP SP A +P++ + +P + PGP SP++ G +
Sbjct: 934 SPTLSQVHSPLVTSPS-ANLKSPQTPSQMVPLPSANPPGPLKSPQVLG-------SSLSV 985
Query: 156 SLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERKMTPFW 215
P P R L++ VP V P PGVS+ K P
Sbjct: 986 RSPTGSPSR-------------LKSPSMAVPSPGWV---ASPKTAMPSPGVSQNKQPPLN 1029
Query: 216 INSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGT 275
+NS + E QGT + P +SS P A+ PP G P P SSP T
Sbjct: 1030 MNSSTTLSNME-----QGTLPPSGPRS-SSSAPPAN-----PPSGLMNPSLPFTSSPDPT 1078
Query: 276 AWGPPTAFDLLK---------------SIWLVAT------------PPPPRPWGVGLPQP 308
P + + + +I +AT PPPP P G G
Sbjct: 1079 PSQNPLSLMMTQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPLLPPPPPPQGSGPGIS 1138
Query: 309 LPQPS----------SPL---LPRTSVLDWSPSP---PSPLPSLSWVVAQSSPEAWSFPP 352
QPS SP+ LP L P P PSP P S + + + PP
Sbjct: 1139 NSQPSQMHLNSAAAQSPMGMNLPGQQPLSHEPPPAMLPSPTPLGSNIPLHPNAQGTGGPP 1198
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 44.7 bits (104), Expect = 1e-04
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 236 EFTFPM----------PYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDL 285
EF++P+ P SS+ + APP G P P + P PP
Sbjct: 273 EFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPP---- 328
Query: 286 LKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
++ PPPP P G G P P PS P P P PP P
Sbjct: 329 -----MIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPP 370
Score = 33.5 bits (75), Expect = 0.30
Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 248 PTAHRGSLAPPRGPWPPYFP---SLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVG 304
P GS P P PP FP ++P PP A D PPPP G
Sbjct: 337 PPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPP--PPPAADY------PTLPPPPLSQPTG 388
Query: 305 ---LPQPLPQPSSPLLPRTSVLDWSPSPPSPL 333
P P P P P P + D P+ P PL
Sbjct: 389 GAPPPPPPPPPPGPPPPPFTGADGQPAIPPPL 420
>gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens]
Length = 712
Score = 44.7 bits (104), Expect = 1e-04
Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 19/89 (21%)
Query: 242 PYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPW 301
PY + MP + L P P P +P P PP W TPPPP P
Sbjct: 602 PYGARMPFGGQVPLGAP--PPFPTWPGCPQP------PPL------HAWQAGTPPPPSPQ 647
Query: 302 GVGLPQPLPQPSSPLLPRTSVLDWSPSPP 330
PQ LP P SP P SP+PP
Sbjct: 648 PAAFPQSLPFPQSPAFPTA-----SPAPP 671
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 44.3 bits (103), Expect = 2e-04
Identities = 66/268 (24%), Positives = 84/268 (31%), Gaps = 65/268 (24%)
Query: 96 VPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPG-----GSGPGP-PSSPELSGVGQLLA 149
VP + + A P P+P +PA + PG G GPGP P P G Q L
Sbjct: 140 VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTL- 198
Query: 150 ELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSER 209
+ L + H P ++LV G LP KP
Sbjct: 199 ----------------------NGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT 236
Query: 210 --KMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFP 267
+ PF + P P P + P A + PP PP
Sbjct: 237 VIQTPPFVGAAAPPAPAA--------------PSPPAAPAPAAPAAAPPPP----PPAPA 278
Query: 268 SLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVG----LPQPLPQPSSPL----LPR 319
+L+ P G GPPTA A PPP G P P P P P
Sbjct: 279 TLARPPGHPAGPPTA--------APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330
Query: 320 TSVLDWSPSPPSPLPSLSWVVAQSSPEA 347
+P+P S VV + P A
Sbjct: 331 PGAAAAAPAPGVKAESPKRVVQAAPPAA 358
Score = 33.5 bits (75), Expect = 0.30
Identities = 69/270 (25%), Positives = 88/270 (32%), Gaps = 37/270 (13%)
Query: 95 LVPGSPTLPAKPSPS------PGRAQEPAPRSRDKENQVPGGSGP---GPPSSPELSGVG 145
+V GSP A P+ PG A EP P R + PGG GP GPP SP V
Sbjct: 62 VVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRAR----PGGGGPQRPGPP-SPRRPLVP 116
Query: 146 QLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVP-----DLALVLRGCQPPLP 200
A +L P + A V P AL R P P
Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 201 GAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRG 260
G PG P P + P + A L P
Sbjct: 177 GPGPGPGPGPGKP---AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAA 233
Query: 261 P-----WPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSP 315
P PP+ + + P+ A PP A A PPPP P L +P P P
Sbjct: 234 PGTVIQTPPFVGAAAPPAPAAPSPPAA---PAPAAPAAAPPPPPPAPATLARP---PGHP 287
Query: 316 LLPRTSVLDWSPSPPSPLPSLSWVVAQSSP 345
P T+ +P+ P P + + A ++P
Sbjct: 288 AGPPTA----APAVPPPAAAQNGGSAGAAP 313
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 34/254 (13%)
Query: 106 PSPSPG--RAQEPAPRSRDKEN-QVPGGSGPGPPSSPELSGVGQLLAELQCQLSLPQAFP 162
PSP G A P P S Q+ G G P + +GQ Q P F
Sbjct: 121 PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQ-------QNRGPTPFN 173
Query: 163 RRNLIQDARDAIVHTLQACHGCVPD-LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQ 221
+ L Q + + + A +PD L + ++G +P PG+ ++ T + P
Sbjct: 174 QNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRP-----MPGMQQQMPT---LPPPSV 225
Query: 222 VPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPW--PPYFPSLSSPSGTAWGP 279
G P P S P G PP GP PP P P G GP
Sbjct: 226 SATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPG--QPPG---GP 280
Query: 280 PTAFD---LLKSIWLVATPP---PPRPWGVGLPQP--LPQPSSPLLPRTSVLDWSPSPPS 331
P + + + +TP PP+P G P P +P +SP++P + P+ P+
Sbjct: 281 PKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPA 340
Query: 332 PLPSLSWVVAQSSP 345
P+ L ++ +P
Sbjct: 341 PMVPLHQKQSRITP 354
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.9 bits (102), Expect = 2e-04
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 24/105 (22%)
Query: 240 PMPYTSSMPTAHRGSLAPP--RGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPP 297
P P + P+ HR ++ PP + PP PS PS ++ PP PPP
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPV-PSTPRPSASSQAPPPP------------PPP 313
Query: 298 PRPWGVGLPQPLPQPSS-----PLLPRTSVLDWSPSPPSPLPSLS 337
RP P PLP SS P LP+ ++ S +PP P P S
Sbjct: 314 SRPG----PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/195 (29%), Positives = 68/195 (34%), Gaps = 61/195 (31%)
Query: 194 GCQPPL--PGAKPGVSERKMTP------FWINSPDQ---VPEQERQRKQQ-----GTKEF 237
G +PPL PG + S + +P F + SP PE +R R G+K
Sbjct: 123 GSRPPLLPPGGR-STSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPD 181
Query: 238 TFPMPYTSS------------MPTAHRGSLAPPRGPWPPYFP-----------------S 268
+ P P S+ P G P GP PP FP S
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 269 LSSP-SGTAWGPPTAFDLLKSIWLVATPPPPRPWG-------VGLPQPLPQ---PSSPLL 317
SSP S PPT L PPPP P G +P P PQ P P
Sbjct: 242 SSSPFSNRPPLPPTPSRALDD----KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297
Query: 318 PRTSVLDWSPSPPSP 332
PR S +P PP P
Sbjct: 298 PRPSASSQAPPPPPP 312
Score = 37.7 bits (86), Expect = 0.016
Identities = 68/250 (27%), Positives = 86/250 (34%), Gaps = 25/250 (10%)
Query: 98 GSPTLPAKP-SPSPGRAQEPAPRSRDKENQVPGGSGPGPP--SSPELSGVGQLLAELQCQ 154
GSP +P P PSPG P P +R + GGS P SS S L
Sbjct: 202 GSPPVPGGPRQPSPGPTPPPFPGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 155 LS---LPQAFPRRNLIQDARDAIVHTL-QACHGCVPDLALVLRGCQPPLPGAKPGVSERK 210
L P P N R+A+ Q VP Q P P P
Sbjct: 260 LDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 211 MTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLS 270
P + D+ P ++ + P P S G L PP PP P +
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS-------GPLPPPPSERPP--PPVR 370
Query: 271 SPSGTAWG----PPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWS 326
P G + PP + + S L ATP P GV P+ P+P LP +
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP---LPPDRPSAGA 427
Query: 327 PSPPSPLPSL 336
P PP P S+
Sbjct: 428 PPPPPPSTSI 437
Score = 29.3 bits (64), Expect = 5.6
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 26/144 (18%)
Query: 6 PVSQPFQQPEKPGRVRRRKTRR--ERNKALVGSRRPLAHHD------PPVAIRDPPVVPT 57
P S+P P P +T R +RN +L S PL PP + R PP V
Sbjct: 312 PPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPV-- 369
Query: 58 ASKLVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPA 117
R+ G V+R S+ +P +P LP++ R+
Sbjct: 370 -------------RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Query: 118 PRSRDKENQVPGGSGPGPPSSPEL 141
P D+ + G+ P PP S +
Sbjct: 417 PLPPDRPS---AGAPPPPPPSTSI 437
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 43.9 bits (102), Expect = 2e-04
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 24/105 (22%)
Query: 240 PMPYTSSMPTAHRGSLAPP--RGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPP 297
P P + P+ HR ++ PP + PP PS PS ++ PP PPP
Sbjct: 267 PPPPVGNRPSIHREAVPPPPPQNNKPPV-PSTPRPSASSQAPPPP------------PPP 313
Query: 298 PRPWGVGLPQPLPQPSS-----PLLPRTSVLDWSPSPPSPLPSLS 337
RP P PLP SS P LP+ ++ S +PP P P S
Sbjct: 314 SRPG----PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/195 (29%), Positives = 68/195 (34%), Gaps = 61/195 (31%)
Query: 194 GCQPPL--PGAKPGVSERKMTP------FWINSPDQ---VPEQERQRKQQ-----GTKEF 237
G +PPL PG + S + +P F + SP PE +R R G+K
Sbjct: 123 GSRPPLLPPGGR-STSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPD 181
Query: 238 TFPMPYTSS------------MPTAHRGSLAPPRGPWPPYFP-----------------S 268
+ P P S+ P G P GP PP FP S
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS 241
Query: 269 LSSP-SGTAWGPPTAFDLLKSIWLVATPPPPRPWG-------VGLPQPLPQ---PSSPLL 317
SSP S PPT L PPPP P G +P P PQ P P
Sbjct: 242 SSSPFSNRPPLPPTPSRALDD----KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297
Query: 318 PRTSVLDWSPSPPSP 332
PR S +P PP P
Sbjct: 298 PRPSASSQAPPPPPP 312
Score = 37.7 bits (86), Expect = 0.016
Identities = 68/250 (27%), Positives = 86/250 (34%), Gaps = 25/250 (10%)
Query: 98 GSPTLPAKP-SPSPGRAQEPAPRSRDKENQVPGGSGPGPP--SSPELSGVGQLLAELQCQ 154
GSP +P P PSPG P P +R + GGS P SS S L
Sbjct: 202 GSPPVPGGPRQPSPGPTPPPFPGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 155 LS---LPQAFPRRNLIQDARDAIVHTL-QACHGCVPDLALVLRGCQPPLPGAKPGVSERK 210
L P P N R+A+ Q VP Q P P P
Sbjct: 260 LDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 211 MTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLS 270
P + D+ P ++ + P P S G L PP PP P +
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRS-------GPLPPPPSERPP--PPVR 370
Query: 271 SPSGTAWG----PPTAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWS 326
P G + PP + + S L ATP P GV P+ P+P LP +
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP---LPPDRPSAGA 427
Query: 327 PSPPSPLPSL 336
P PP P S+
Sbjct: 428 PPPPPPSTSI 437
Score = 29.3 bits (64), Expect = 5.6
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 26/144 (18%)
Query: 6 PVSQPFQQPEKPGRVRRRKTRR--ERNKALVGSRRPLAHHD------PPVAIRDPPVVPT 57
P S+P P P +T R +RN +L S PL PP + R PP V
Sbjct: 312 PPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPV-- 369
Query: 58 ASKLVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPA 117
R+ G V+R S+ +P +P LP++ R+
Sbjct: 370 -------------RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Query: 118 PRSRDKENQVPGGSGPGPPSSPEL 141
P D+ + G+ P PP S +
Sbjct: 417 PLPPDRPS---AGAPPPPPPSTSI 437
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 43.9 bits (102), Expect = 2e-04
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 22/152 (14%)
Query: 215 WINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAP-PRGPWPPYFPSLSSPS 273
W SP PE R+ + + E P P S P +++P PR P P P P
Sbjct: 257 WGPSPAASPES-RKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKP- 314
Query: 274 GTAWGPPTAFDLLKSI-------WLVATPPP---PRPWGVGLPQPLPQPSSPLLPRTSVL 323
GPP + KS W A P P P PW +P P P P P S
Sbjct: 315 ----GPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKP-IPSVSPGPWKPT-PSVSSA 368
Query: 324 DWSPSPPSPLPSLSWVVAQSSPEAWSFPPMRL 355
W S SP SW +SPE+W P L
Sbjct: 369 SWKSSSVSPS---SWKSPPASPESWKSGPPEL 397
Score = 34.3 bits (77), Expect = 0.18
Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 24/161 (14%)
Query: 200 PGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGT---KEFTFPMPYTSSMPTAHRGSLA 256
P P + E + P P +P + ++ G+ E P P T P GS+
Sbjct: 105 PVKSPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKP-GSVV 163
Query: 257 PPRGPWPPYFPSLSSPSGTAWG-PPTAFDLLKSIWL--VATPPPPRPWGVG-------LP 306
P P P S P+ + PP + + +S L V +P P +P V L
Sbjct: 164 SPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLS 223
Query: 307 QPLPQ----------PSSPLLPRTSVLDWSPSPPSPLPSLS 337
P PQ P S P + VL SP P P P+ S
Sbjct: 224 NPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAAS 264
Score = 33.9 bits (76), Expect = 0.23
Identities = 64/249 (25%), Positives = 84/249 (33%), Gaps = 59/249 (23%)
Query: 91 SSGTLVPGSPTLPAKPSP-------SPGRAQEPAPRSRD---KENQVPGGSGPGPPSSPE 140
SSG P P P P SPG +P P K + V S PP+SPE
Sbjct: 330 SSGPWKPAKPAPSVSPGPWKPIPSVSPG-PWKPTPSVSSASWKSSSVSPSSWKSPPASPE 388
Query: 141 L--SGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPP 198
SG +L + + P P VP ++ LR PP
Sbjct: 389 SWKSGPPEL------RKTAPTLSPEH-----------------WKAVPPVSPELRKPGPP 425
Query: 199 L------PGAKPGVSERKMTP-FWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSM---P 248
L P P + + +P W SPDQ ++ FP SS P
Sbjct: 426 LSPEIRSPAGSPELRKPSGSPDLWKLSPDQ--------RKTSPASLDFPESQKSSRGGSP 477
Query: 249 TAHRGSLAPPRGPWPPYFPSLSSP--SGTAWGPPTAFDLLKSIWLVATPPPPRPWGVGLP 306
+ S P P FP P SG + P A D+ K + + T P +P P
Sbjct: 478 DLWKSSFFIE--PQKPVFPETRKPGPSGPSESPKAASDIWKPVLSIDT-EPRKPALFPEP 534
Query: 307 QPLPQPSSP 315
P+SP
Sbjct: 535 AKTAPPASP 543
Score = 30.4 bits (67), Expect = 2.5
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 8/44 (18%)
Query: 103 PAKPSPS-------PGRAQEPAPRSRDKENQVPGGSGPGPPSSP 139
P KPSPS P A P PR R PG PGPP SP
Sbjct: 278 PRKPSPSESPEPWKPFPAVSPEPR-RPAPAVSPGSWKPGPPGSP 320
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 43.9 bits (102), Expect = 2e-04
Identities = 43/148 (29%), Positives = 56/148 (37%), Gaps = 16/148 (10%)
Query: 194 GCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRG 253
G +PP+P P +++ P P Q Q ++ P P SS P +G
Sbjct: 55 GPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQG 114
Query: 254 --------SLAPPRGPWPPYFPSLS-SPSGTAWGP-PTAFDLLKSIWLVATP--PPPRPW 301
S P PP P S +P G+ GP PT + S A P PPP P
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTS----APPGAPPPTPP 170
Query: 302 GVGLPQPLPQPSSPLLPRTSVLDWSPSP 329
G+P PQ P P +V P P
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
Score = 32.0 bits (71), Expect = 0.87
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 6/99 (6%)
Query: 43 HDPPVAIRDPPVVPTASKLVVITQGRLSREHRGLFNHEVKSLDVARLLSSGTLVPGS--- 99
H P + PP P S V+ QG G S A +SG PGS
Sbjct: 90 HPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA-PPGSGPG 148
Query: 100 --PTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPP 136
PT P + +P A P P S P GP PP
Sbjct: 149 PTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPP 187
Score = 32.0 bits (71), Expect = 0.87
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 100 PTLPAKPSPSPGRAQEP-----APRSRDKENQVPGGSGPGPPSSP 139
P + P P+PG P AP + + P GSGPGP +P
Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTP 153
Score = 28.5 bits (62), Expect = 9.6
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 98 GSPTLPAKPS-PSPGRAQEPAPRSRDKENQVPGG-------SGPGPPSSPELSGVG 145
G PT P + P P A P P K+ PGG GP P P LS G
Sbjct: 173 GVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPG 228
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 43.5 bits (101), Expect = 3e-04
Identities = 46/155 (29%), Positives = 60/155 (38%), Gaps = 19/155 (12%)
Query: 188 LALVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSM 247
L L G PL G PG P +SPDQ P Q K +G + +
Sbjct: 339 LQAFLAGAAGPLNGDHPG-------PGQSSSPDQAPPQ--LSKSKGLPKSA----WGGGT 385
Query: 248 PTAHR---GSLAPPRGPWP---PYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPPRPW 301
P AHR G+ + +GP P + + +P G+ G P + +KS + P P
Sbjct: 386 PEAHRPGFGATSEGQGPLPFLSMFMGAGDAPLGSRPGHPHSSSQVKSKLQIGPPSPGEAQ 445
Query: 302 GVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSL 336
G LP P LP TS SP P P L
Sbjct: 446 GPLLPSPARGLKFLKLPPTSEKSPSPGGPQLSPQL 480
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 42/154 (27%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 190 LVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQG-TKEFTFPMP------ 242
+++R +PP P G + K P I+S + E Q G T F P P
Sbjct: 271 VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPP 330
Query: 243 ----YTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPP 298
++S A S PP P PP P+ + + PP + + L PPP
Sbjct: 331 LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGV-LHPAPPPI 389
Query: 299 RPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
P PL QPS P+ V + P P P
Sbjct: 390 AP-------PLVQPSPPVARAAPVCETVPVHPLP 416
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 42/154 (27%), Positives = 58/154 (37%), Gaps = 19/154 (12%)
Query: 190 LVLRGCQPPLPGAKPGVSERKMTPFWINSPDQVPEQERQRKQQG-TKEFTFPMP------ 242
+++R +PP P G + K P I+S + E Q G T F P P
Sbjct: 271 VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPP 330
Query: 243 ----YTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPPTAFDLLKSIWLVATPPPP 298
++S A S PP P PP P+ + + PP + + L PPP
Sbjct: 331 LPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGV-LHPAPPPI 389
Query: 299 RPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSP 332
P PL QPS P+ V + P P P
Sbjct: 390 AP-------PLVQPSPPVARAAPVCETVPVHPLP 416
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,510,087
Number of Sequences: 37866
Number of extensions: 1578890
Number of successful extensions: 12271
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 798
Number of HSP's that attempted gapping in prelim test: 8471
Number of HSP's gapped (non-prelim): 3866
length of query: 356
length of database: 18,247,518
effective HSP length: 103
effective length of query: 253
effective length of database: 14,347,320
effective search space: 3629871960
effective search space used: 3629871960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.