Search of human proteins with 50897288

Search of human proteins with 50897288

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50897288 H2B histone family, member W, testis-specific [Homo
sapiens]
         (175 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50897288 H2B histone family, member W, testis-specific [Homo ...   345   1e-95
gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]   210   4e-55
gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]   210   4e-55
gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]   208   2e-54
gi|28173554 histone cluster 3, H2bb [Homo sapiens]                     97   5e-21
gi|4504259 histone cluster 1, H2bl [Homo sapiens]                      95   3e-20
gi|24586679 histone cluster 1, H2ba [Homo sapiens]                     95   3e-20
gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]          94   6e-20
gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]           94   6e-20
gi|10800138 histone cluster 1, H2bd [Homo sapiens]                     94   6e-20
gi|18105048 histone cluster 1, H2bk [Homo sapiens]                     94   6e-20
gi|4504269 histone cluster 1, H2bh [Homo sapiens]                      94   6e-20
gi|4504263 histone cluster 1, H2bm [Homo sapiens]                      94   6e-20
gi|20336752 histone cluster 1, H2bd [Homo sapiens]                     94   6e-20
gi|4504261 histone cluster 1, H2bn [Homo sapiens]                      94   6e-20
gi|21396484 histone cluster 1, H2be [Homo sapiens]                     94   6e-20
gi|4504265 histone cluster 1, H2bf [Homo sapiens]                      94   6e-20
gi|4504257 histone cluster 1, H2bg [Homo sapiens]                      94   6e-20
gi|21166389 histone cluster 1, H2bc [Homo sapiens]                     94   6e-20
gi|4504271 histone cluster 1, H2bi [Homo sapiens]                      94   6e-20
gi|4504277 histone cluster 2, H2be [Homo sapiens]                      94   8e-20
gi|20336754 histone cluster 1, H2bj [Homo sapiens]                     94   8e-20
gi|16306566 histone cluster 1, H2bo [Homo sapiens]                     94   8e-20
gi|10800140 histone cluster 1, H2bb [Homo sapiens]                     94   8e-20
gi|11761626 suppression of tumorigenicity 7 isoform b [Homo sapi...    33   0.097
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...    32   0.22 
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...    32   0.22 
gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene f...    30   1.4  
gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene f...    30   1.4  
gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene f...    30   1.4  

>gi|50897288 H2B histone family, member W, testis-specific [Homo
           sapiens]
          Length = 175

 Score =  345 bits (885), Expect = 1e-95
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MLRTEVPRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSK 60
           MLRTEVPRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSK
Sbjct: 1   MLRTEVPRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSK 60

Query: 61  QRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATE 120
           QRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATE
Sbjct: 61  QRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATE 120

Query: 121 AGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK 175
           AGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK
Sbjct: 121 AGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK 175


>gi|169216381 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score =  210 bits (535), Expect = 4e-55
 Identities = 119/173 (68%), Positives = 134/173 (77%), Gaps = 7/173 (4%)

Query: 7   PRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSKQRKRGR 66
           P LP S T  + SC+LMA ASAMA  SSETTSEE    QEPKEANST +QKQ   ++RG 
Sbjct: 88  PPLPWSPTVTLCSCYLMAAASAMAEASSETTSEEGQSIQEPKEANSTKAQKQ---KRRGC 144

Query: 67  HGPRRCHSNCRGDSFAT----YFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
            G RR H+N RGDSF      YF RVLKQVHQGLSLS+EAVSVMDS++HDILDRIATEAG
Sbjct: 145 RGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAG 204

Query: 123 HLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK 175
            LA  TKR TIT+ + +MAVRLLLPG+MGKLAE++GT A LRTSL AI QQRK
Sbjct: 205 QLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALRTSLCAIWQQRK 257


>gi|169216635 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 257

 Score =  210 bits (535), Expect = 4e-55
 Identities = 119/173 (68%), Positives = 134/173 (77%), Gaps = 7/173 (4%)

Query: 7   PRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSKQRKRGR 66
           P LP S T  + SC+LMA ASAMA  SSETTSEE    QEPKEANST +QKQ   ++RG 
Sbjct: 88  PPLPWSPTVTLCSCYLMAAASAMAEASSETTSEEGQSIQEPKEANSTKAQKQ---KRRGC 144

Query: 67  HGPRRCHSNCRGDSFAT----YFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
            G RR H+N RGDSF      YF RVLKQVHQGLSLS+EAVSVMDS++HDILDRIATEAG
Sbjct: 145 RGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAG 204

Query: 123 HLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK 175
            LA  TKR TIT+ + +MAVRLLLPG+MGKLAE++GT A LRTSL AI QQRK
Sbjct: 205 QLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALRTSLCAIWQQRK 257


>gi|169217174 PREDICTED: H2B histone family, member M [Homo sapiens]
          Length = 248

 Score =  208 bits (529), Expect = 2e-54
 Identities = 118/173 (68%), Positives = 133/173 (76%), Gaps = 7/173 (4%)

Query: 7   PRLPRSTTAIVWSCHLMATASAMAGPSSETTSEEQLITQEPKEANSTTSQKQSKQRKRGR 66
           P LP S T  + SC+LMA ASAMA  SSETTSEE    QEPKEANST +QKQ   ++RG 
Sbjct: 79  PPLPWSPTVTLCSCYLMAAASAMAEASSETTSEEGQSIQEPKEANSTKAQKQ---KRRGC 135

Query: 67  HGPRRCHSNCRGDSFAT----YFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
            G RR H+N RGDSF      YF RVLKQVH GLSLS+EAVSVMDS++HDILDRIATEAG
Sbjct: 136 RGSRRRHANRRGDSFGDSFTPYFPRVLKQVHXGLSLSQEAVSVMDSMIHDILDRIATEAG 195

Query: 123 HLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLRTSLYAIQQQRK 175
            LA  TKR TIT+ + +MAVRLLLPG+MGKLAE++GT A LRTSL AI QQRK
Sbjct: 196 QLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALRTSLCAIWQQRK 248


>gi|28173554 histone cluster 3, H2bb [Homo sapiens]
          Length = 126

 Score = 97.4 bits (241), Expect = 5e-21
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKRGR            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRGRK-----------ESYSIYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA+EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504259 histone cluster 1, H2bl [Homo sapiens]
          Length = 126

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA+EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|24586679 histone cluster 1, H2ba [Homo sapiens]
          Length = 127

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A   T +K+ K+RKR R            +S++ Y  +VLKQVH    +S +A+S+M+
Sbjct: 17  KKAVVKTQKKEGKKRKRTRK-----------ESYSIYIYKVLKQVHPDTGISSKAMSIMN 65

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V DI +RIA+EA  LA  +KR TI++ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 66  SFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTK 122


>gi|238624110 histone cluster 2, H2bf isoform b [Homo sapiens]
          Length = 134

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKVQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|66912162 histone cluster 2, H2bf isoform a [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKVQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|10800138 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|18105048 histone cluster 1, H2bk [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504269 histone cluster 1, H2bh [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504263 histone cluster 1, H2bm [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAINKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|20336752 histone cluster 1, H2bd [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504261 histone cluster 1, H2bn [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|21396484 histone cluster 1, H2be [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504265 histone cluster 1, H2bf [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504257 histone cluster 1, H2bg [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|21166389 histone cluster 1, H2bc [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504271 histone cluster 1, H2bi [Homo sapiens]
          Length = 126

 Score = 94.0 bits (232), Expect = 6e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSVYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|4504277 histone cluster 2, H2be [Homo sapiens]
          Length = 126

 Score = 93.6 bits (231), Expect = 8e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSIYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|20336754 histone cluster 1, H2bj [Homo sapiens]
          Length = 126

 Score = 93.6 bits (231), Expect = 8e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSIYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|16306566 histone cluster 1, H2bo [Homo sapiens]
          Length = 126

 Score = 93.6 bits (231), Expect = 8e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAVTKAQKKDGKKRKRSRK-----------ESYSIYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|10800140 histone cluster 1, H2bb [Homo sapiens]
          Length = 126

 Score = 93.6 bits (231), Expect = 8e-20
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 11/117 (9%)

Query: 48  KEANSTTSQKQSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMD 107
           K+A +   +K  K+RKR R            +S++ Y  +VLKQVH    +S +A+ +M+
Sbjct: 16  KKAITKAQKKDGKKRKRSRK-----------ESYSIYVYKVLKQVHPDTGISSKAMGIMN 64

Query: 108 SLVHDILDRIATEAGHLARSTKRQTITAWETRMAVRLLLPGQMGKLAESEGTKAVLR 164
           S V+DI +RIA EA  LA   KR TIT+ E + AVRLLLPG++ K A SEGTKAV +
Sbjct: 65  SFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 121


>gi|11761626 suppression of tumorigenicity 7 isoform b [Homo
           sapiens]
          Length = 585

 Score = 33.5 bits (75), Expect = 0.097
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 3   RTEVPRLPRSTTAIVWSCHLM---ATASAMAGPSSETT--SEEQLITQEPKEANSTTSQK 57
           R EVP +  ST   +W   L+   ATA  +      TT    E+L  Q  K  +    + 
Sbjct: 218 RVEVPLIASST---IWEIKLLPKCATAYILLAEEEATTIAEAEKLFKQALKAGDGCYRRS 274

Query: 58  QSKQRKRGRHGPRRCHSNCRGDSFATYFRRVLKQVHQGLSLSREAVSVMDSLVHD 112
           Q  Q     HG +    + R  +   Y +R L    + L  +REAV +M  L+ +
Sbjct: 275 QQLQH----HGSQYEAQHRRDTNVLVYIKRRLAMCARRLGRTREAVKMMRDLMKE 325


>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
           [Homo sapiens]
          Length = 881

 Score = 32.3 bits (72), Expect = 0.22
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 32  PSSETTSEEQLITQEPKEANSTTSQKQSKQ--RKRGRHGP------RRCHSNCRGDSFAT 83
           PS     E+Q   +E +EA  +     S+   RKR R GP      RR  +  R   F  
Sbjct: 623 PSRPALQEKQPEKEEEEEAGESVEDIFSEVVGRKRQRSGPNRGAKRRREEARQRDQEFYI 682

Query: 84  YFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGHLARSTKR 130
            +R       +GLS+S E  +        +LD +  EA +L R  ++
Sbjct: 683 PYRPKDFDSERGLSISGEGGAFEQQAAGAVLDLMGDEAQNLTRGRQQ 729


>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
           [Homo sapiens]
          Length = 882

 Score = 32.3 bits (72), Expect = 0.22
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 32  PSSETTSEEQLITQEPKEANSTTSQKQSKQ--RKRGRHGP------RRCHSNCRGDSFAT 83
           PS     E+Q   +E +EA  +     S+   RKR R GP      RR  +  R   F  
Sbjct: 623 PSRPALQEKQPEKEEEEEAGESVEDIFSEVVGRKRQRSGPNRGAKRRREEARQRDQEFYI 682

Query: 84  YFRRVLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAGHLARSTKR 130
            +R       +GLS+S E  +        +LD +  EA +L R  ++
Sbjct: 683 PYRPKDFDSERGLSISGEGGAFEQQAAGAVLDLMGDEAQNLTRGRQQ 729


>gi|169217181 PREDICTED: similar to RAB40A, member RAS oncogene
           family [Homo sapiens]
          Length = 224

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 88  VLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
           VLKQ H  +S +   + +M+  + DI + I T+AG
Sbjct: 31  VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKAG 65


>gi|169216368 PREDICTED: similar to RAB40A, member RAS oncogene
           family [Homo sapiens]
          Length = 224

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 88  VLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
           VLKQ H  +S +   + +M+  + DI + I T+AG
Sbjct: 31  VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKAG 65


>gi|169216631 PREDICTED: similar to RAB40A, member RAS oncogene
           family [Homo sapiens]
          Length = 224

 Score = 29.6 bits (65), Expect = 1.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 88  VLKQVHQGLSLSREAVSVMDSLVHDILDRIATEAG 122
           VLKQ H  +S +   + +M+  + DI + I T+AG
Sbjct: 31  VLKQFHPDISTTLNFLGIMNDFLIDIFEHITTKAG 65


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.125    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,812,903
Number of Sequences: 37866
Number of extensions: 206387
Number of successful extensions: 1214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1163
Number of HSP's gapped (non-prelim): 79
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.