Guide to the Human Genome
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Name: CFL1 Sequence: fasta or formatted (166aa) NCBI GI: 5031635
Description:

cofilin 1 (non-muscle)

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         13           1
 C cysteine            2.4          4           1
 D aspartate           7.2         12           2
 E glutamate           9.0         15           2
 F phenylalanine       3.0          5           1
 G glycine             5.4          9           2
 H histidine           0.6          1           1
 I isoleucine          5.4          9           2
 K lysine             15.1         25           3
 L leucine             8.4         14           1
 M methionine          2.4          4           1
 N asparagine          1.8          3           1
 P proline             3.6          6           1
 Q glutamine           1.2          2           1
 R arginine            2.4          4           1
 S serine              7.2         12           2
 T threonine           4.2          7           1
 V valine              8.4         14           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cofilin 1 (non-muscle) 
CFL2                  0.813   cofilin 2 
CFL2                  0.813   cofilin 2 
DSTN                  0.695   destrin isoform a 
DSTN                  0.633   destrin isoform b 
LOC729454             0.466   PREDICTED: similar to Destrin (actin depolymerizing...
LOC729454             0.459   PREDICTED: similar to Destrin (actin depolymerizing...
LOC729454             0.459   PREDICTED: similar to destrin 
LOC100294015          0.390   PREDICTED: similar to destrin 
LOC100287016          0.390   PREDICTED: similar to destrin 
LOC100287016          0.390   PREDICTED: hypothetical protein XP_002342890 
TWF1                  0.066   twinfilin 1 
TWF2                  0.052   twinfilin-like protein 
GMFB                  0.033   glia maturation factor, beta 
GMFG                  0.020   glia maturation factor, gamma 
DBR1                  0.016   debranching enzyme homolog 1 
GOLGB1                0.016   golgi autoantigen, golgin subfamily b, macrogolgin ...
ZBTB2                 0.007   zinc finger and BTB domain containing 2 
EFHC2                 0.007   EF-hand domain (C-terminal) containing 2 
NAALADL2              0.007   N-acetylated alpha-linked acidic dipeptidase 2 [Hom...
PLAA                  0.007   phospholipase A2-activating protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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