Guide to the Human Genome
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Name: TWF1 Sequence: fasta or formatted (384aa) NCBI GI: 40068475
Description:

twinfilin 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         29           4
 C cysteine            1.0          4           1
 D aspartate           5.5         21           1
 E glutamate           7.8         30           3
 F phenylalanine       3.6         14           2
 G glycine             5.7         22           3
 H histidine           3.4         13           1
 I isoleucine          7.0         27           3
 K lysine              7.0         27           2
 L leucine             8.9         34           2
 M methionine          1.6          6           1
 N asparagine          2.9         11           2
 P proline             4.2         16           2
 Q glutamine           5.5         21           1
 R arginine            7.3         28           3
 S serine              7.3         28           2
 T threonine           4.7         18           2
 V valine              4.2         16           1
 W tryptophan          0.8          3           1
 Y tyrosine            4.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   twinfilin 1 
TWF2                  0.622   twinfilin-like protein 
CFL1                  0.027   cofilin 1 (non-muscle) 
GMFG                  0.024   glia maturation factor, gamma 
CFL2                  0.024   cofilin 2 
CFL2                  0.024   cofilin 2 
DSTN                  0.019   destrin isoform b 
DSTN                  0.019   destrin isoform a 
LOC729454             0.011   PREDICTED: similar to Destrin (actin depolymerizing...
LOC729454             0.011   PREDICTED: similar to destrin 
LOC729454             0.011   PREDICTED: similar to Destrin (actin depolymerizing...
C21orf56              0.008   hypothetical protein LOC84221 isoform 1 
C21orf56              0.008   hypothetical protein LOC84221 isoform 2 
THAP8                 0.007   THAP domain containing 8 
CTR9                  0.007   SH2 domain binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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