Guide to the Human Genome
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Name: GMFB Sequence: fasta or formatted (142aa) NCBI GI: 4758442
Description:

glia maturation factor, beta

Referenced in:

Oligodendrocytes and Myelin
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          5           2
 C cysteine            2.1          3           1
 D aspartate           7.0         10           2
 E glutamate          12.0         17           2
 F phenylalanine       5.6          8           2
 G glycine             3.5          5           1
 H histidine           1.4          2           1
 I isoleucine          4.9          7           2
 K lysine              9.2         13           1
 L leucine             9.9         14           1
 M methionine          2.8          4           2
 N asparagine          2.8          4           2
 P proline             4.2          6           1
 Q glutamine           3.5          5           2
 R arginine            6.3          9           1
 S serine              5.6          8           2
 T threonine           3.5          5           1
 V valine              7.7         11           2
 W tryptophan          0.7          1           1
 Y tyrosine            3.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glia maturation factor, beta 
GMFG                  0.833   glia maturation factor, gamma 
CFL2                  0.046   cofilin 2 
CFL2                  0.046   cofilin 2 
CFL1                  0.038   cofilin 1 (non-muscle) 
FKBP4                 0.011   FK506 binding protein 52 
TPR                   0.011   nuclear pore complex-associated protein TPR 
SUZ12                 0.008   joined to JAZF1 
CNTNAP1               0.008   contactin associated protein 1 precursor 
TBCKL                 0.008   TBC domain-containing protein kinase-like 
CLIC2                 0.008   chloride intracellular channel 2 
BSN                   0.004   bassoon protein 
KATNAL1               0.004   katanin p60 subunit A-like 1 
KATNAL1               0.004   katanin p60 subunit A-like 1 
C6orf103              0.004   hypothetical protein LOC79747 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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