Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR6V1 Sequence: fasta or formatted (313aa) NCBI GI: 48717323
Description:

olfactory receptor, family 6, subfamily V, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         21           2
 C cysteine            3.2         10           1
 D aspartate           2.9          9           1
 E glutamate           1.6          5           1
 F phenylalanine       8.6         27           2
 G glycine             5.1         16           1
 H histidine           3.2         10           1
 I isoleucine          4.8         15           3
 K lysine              2.2          7           1
 L leucine            15.7         49           2
 M methionine          4.5         14           1
 N asparagine          2.2          7           1
 P proline             4.2         13           1
 Q glutamine           3.8         12           1
 R arginine            3.2         10           1
 S serine              8.0         25           2
 T threonine           7.7         24           2
 V valine              8.6         27           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily V, member 1 ... 
OR6S1                 0.439   olfactory receptor, family 6, subfamily S, member 1 ...
OR6C4                 0.416   olfactory receptor, family 6, subfamily C, member 4 ...
OR6F1                 0.409   olfactory receptor, family 6, subfamily F, member 1 ...
OR9A4                 0.406   olfactory receptor, family 9, subfamily A, member 4 ...
OR6C3                 0.404   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C76                0.398   olfactory receptor, family 6, subfamily C, member 76...
OR6C75                0.393   olfactory receptor, family 6, subfamily C, member 75...
OR9A2                 0.389   olfactory receptor, family 9, subfamily A, member 2 ...
OR6M1                 0.389   olfactory receptor, family 6, subfamily M, member 1 ...
OR6C74                0.388   olfactory receptor, family 6, subfamily C, member 74...
OR6C65                0.383   olfactory receptor, family 6, subfamily C, member 65...
OR6C70                0.383   olfactory receptor, family 6, subfamily C, member 70...
OR6T1                 0.383   olfactory receptor, family 6, subfamily T, member 1 ...
OR6C1                 0.381   olfactory receptor, family 6, subfamily C, member 1 ...
OR6X1                 0.379   olfactory receptor, family 6, subfamily X, member 1 ...
OR1L4                 0.379   olfactory receptor, family 1, subfamily L, member 4 ...
OR5A1                 0.379   olfactory receptor, family 5, subfamily A, member 1 ...
OR6N1                 0.379   olfactory receptor, family 6, subfamily N, member 1 ...
OR6C6                 0.378   olfactory receptor, family 6, subfamily C, member 6 ...
OR5V1                 0.373   olfactory receptor, family 5, subfamily V, member 1 ...
OR6B2                 0.371   olfactory receptor, family 6, subfamily B, member 2 ...
OR1L6                 0.371   olfactory receptor, family 1, subfamily L, member 6 ...
OR10Z1                0.371   olfactory receptor, family 10, subfamily Z, member 1...
OR6B3                 0.369   olfactory receptor, family 6, subfamily B, member 3 ...
OR5A2                 0.369   olfactory receptor, family 5, subfamily A, member 2 ...
OR6A2                 0.368   olfactory receptor, family 6, subfamily A, member 2 ...
OR6Y1                 0.366   olfactory receptor, family 6, subfamily Y, member 1 ...
OR6C2                 0.364   olfactory receptor, family 6, subfamily C, member 2 ...
OR6B1                 0.363   olfactory receptor, family 6, subfamily B, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press