Guide to the Human Genome
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Search of human proteins with 49249977

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|49249977 Na+/K+ -ATPase alpha 4 subunit isoform 2 [Homo
sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|49249977 Na+/K+ -ATPase alpha 4 subunit isoform 2 [Homo sapiens]   342   1e-94
gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo sapi...   342   1e-94
gi|4502271 Na+/K+ -ATPase alpha 2 subunit proprotein [Homo sapiens]   289   7e-79
gi|237681109 Na+/K+ -ATPase alpha 1 subunit isoform c [Homo sapi...   288   1e-78
gi|237681111 Na+/K+ -ATPase alpha 1 subunit isoform d [Homo sapi...   288   1e-78
gi|21361181 Na+/K+ -ATPase alpha 1 subunit isoform a [Homo sapiens]   288   1e-78
gi|22748667 Na+/K+ -ATPase alpha 3 subunit [Homo sapiens]             287   3e-78
gi|51944966 hydrogen/potassium-exchanging ATPase 4A [Homo sapiens]    176   1e-44
gi|83700225 hydrogen/potassium-exchanging ATPase 12A [Homo sapiens]   172   9e-44
gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...    32   0.25 
gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...    32   0.25 
gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...    32   0.25 
gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b [...    31   0.56 
gi|28373103 ATPase, Ca++ transporting, ubiquitous isoform a [Hom...    29   2.1  
gi|28373115 ATPase, Ca++ transporting, ubiquitous isoform c [Hom...    29   2.1  
gi|28373113 ATPase, Ca++ transporting, ubiquitous isoform f [Hom...    29   2.1  
gi|28373111 ATPase, Ca++ transporting, ubiquitous isoform c [Hom...    29   2.1  
gi|28373109 ATPase, Ca++ transporting, ubiquitous isoform b [Hom...    29   2.1  
gi|28373107 ATPase, Ca++ transporting, ubiquitous isoform d [Hom...    29   2.1  
gi|28373105 ATPase, Ca++ transporting, ubiquitous isoform e [Hom...    29   2.1  
gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a [...    29   2.1  
gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]     28   2.8  
gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]      28   2.8  
gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]      28   2.8  
gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]            27   8.0  
gi|169215109 PREDICTED: hypothetical protein [Homo sapiens]            27   8.0  
gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]            27   8.0  

>gi|49249977 Na+/K+ -ATPase alpha 4 subunit isoform 2 [Homo sapiens]
          Length = 165

 Score =  342 bits (876), Expect = 1e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
           MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC
Sbjct: 1   MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60

Query: 61  QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
           QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL
Sbjct: 61  QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120

Query: 121 RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
           RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY
Sbjct: 121 RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165


>gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo sapiens]
          Length = 1029

 Score =  342 bits (876), Expect = 1e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC
Sbjct: 865  MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 924

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
            QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL
Sbjct: 925  QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 984

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY
Sbjct: 985  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 1029


>gi|4502271 Na+/K+ -ATPase alpha 2 subunit proprotein [Homo sapiens]
          Length = 1020

 Score =  289 bits (740), Expect = 7e-79
 Identities = 132/165 (80%), Positives = 150/165 (90%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            MIQAL GFFTYFVILAENGF P  LLGIRL W+D+ +NDLEDSYGQ+WTYEQRKVVEFTC
Sbjct: 856  MIQALGGFFTYFVILAENGFLPSRLLGIRLDWDDRTMNDLEDSYGQEWTYEQRKVVEFTC 915

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
             TAFF +IVVVQWADLII KTRRNS+FQQGM+NK+LIFG+LEET LAAFLSY PGM VAL
Sbjct: 916  HTAFFASIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLLEETALAAFLSYCPGMGVAL 975

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            RMYPLK+TWW CA PYS+LIF+YDE+RKL++R++P GWVE+ETYY
Sbjct: 976  RMYPLKVTWWFCAFPYSLLIFIYDEVRKLILRRYPGGWVEKETYY 1020


>gi|237681109 Na+/K+ -ATPase alpha 1 subunit isoform c [Homo sapiens]
          Length = 1023

 Score =  288 bits (738), Expect = 1e-78
 Identities = 130/165 (78%), Positives = 150/165 (90%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            MIQAL GFFTYFVILAENGF P+ LLG+R+ W+D+++ND+EDSYGQQWTYEQRK+VEFTC
Sbjct: 859  MIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWINDVEDSYGQQWTYEQRKIVEFTC 918

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
             TAFFV+IVVVQWADL+I KTRRNS+FQQGM+NK+LIFG+ EET LAAFLSY PGM VAL
Sbjct: 919  HTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVAL 978

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            RMYPLK TWW CA PYS+LIFVYDE+RKL+IR+ P GWVE+ETYY
Sbjct: 979  RMYPLKPTWWFCAFPYSLLIFVYDEVRKLIIRRRPGGWVEKETYY 1023


>gi|237681111 Na+/K+ -ATPase alpha 1 subunit isoform d [Homo
           sapiens]
          Length = 992

 Score =  288 bits (738), Expect = 1e-78
 Identities = 130/165 (78%), Positives = 150/165 (90%)

Query: 1   MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
           MIQAL GFFTYFVILAENGF P+ LLG+R+ W+D+++ND+EDSYGQQWTYEQRK+VEFTC
Sbjct: 828 MIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWINDVEDSYGQQWTYEQRKIVEFTC 887

Query: 61  QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
            TAFFV+IVVVQWADL+I KTRRNS+FQQGM+NK+LIFG+ EET LAAFLSY PGM VAL
Sbjct: 888 HTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVAL 947

Query: 121 RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
           RMYPLK TWW CA PYS+LIFVYDE+RKL+IR+ P GWVE+ETYY
Sbjct: 948 RMYPLKPTWWFCAFPYSLLIFVYDEVRKLIIRRRPGGWVEKETYY 992


>gi|21361181 Na+/K+ -ATPase alpha 1 subunit isoform a [Homo sapiens]
          Length = 1023

 Score =  288 bits (738), Expect = 1e-78
 Identities = 130/165 (78%), Positives = 150/165 (90%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            MIQAL GFFTYFVILAENGF P+ LLG+R+ W+D+++ND+EDSYGQQWTYEQRK+VEFTC
Sbjct: 859  MIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWINDVEDSYGQQWTYEQRKIVEFTC 918

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
             TAFFV+IVVVQWADL+I KTRRNS+FQQGM+NK+LIFG+ EET LAAFLSY PGM VAL
Sbjct: 919  HTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVAL 978

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            RMYPLK TWW CA PYS+LIFVYDE+RKL+IR+ P GWVE+ETYY
Sbjct: 979  RMYPLKPTWWFCAFPYSLLIFVYDEVRKLIIRRRPGGWVEKETYY 1023


>gi|22748667 Na+/K+ -ATPase alpha 3 subunit [Homo sapiens]
          Length = 1013

 Score =  287 bits (735), Expect = 3e-78
 Identities = 133/165 (80%), Positives = 151/165 (91%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            MIQAL GFF+YFVILAENGF P +L+GIRL+W+D+ +NDLEDSYGQQWTYEQRKVVEFTC
Sbjct: 849  MIQALGGFFSYFVILAENGFLPGNLVGIRLNWDDRTVNDLEDSYGQQWTYEQRKVVEFTC 908

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
             TAFFV+IVVVQWADLII KTRRNS+FQQGM+NK+LIFG+ EET LAAFLSY PGMDVAL
Sbjct: 909  HTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVAL 968

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            RMYPLK +WW CA PYS LIFVYDEIRKL++R++P GWVE+ETYY
Sbjct: 969  RMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY 1013


>gi|51944966 hydrogen/potassium-exchanging ATPase 4A [Homo sapiens]
          Length = 1035

 Score =  176 bits (445), Expect = 1e-44
 Identities = 82/165 (49%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 2    IQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQ 61
            IQ+ AGF  YF  +A+ G+ P+  +G+R  WED +L DL+DSYGQ+WT+ QR   ++TC 
Sbjct: 871  IQSFAGFTDYFTAMAQEGWFPLLCVGLRAQWEDHHLQDLQDSYGQEWTFGQRLYQQYTCY 930

Query: 62   TAFFVTIVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVAL 120
            T FF++I V Q AD++I KTRR S FQQG  RNK+L+  I+ +  +  FL Y PGM    
Sbjct: 931  TVFFISIEVCQIADVLIRKTRRLSAFQQGFFRNKILVIAIVFQVCIGCFLCYCPGMPNIF 990

Query: 121  RMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
               P++  WWL  +PY ILIFVYDEIRKL +R  P  W ++E YY
Sbjct: 991  NFMPIRFQWWLVPLPYGILIFVYDEIRKLGVRCCPGSWWDQELYY 1035


>gi|83700225 hydrogen/potassium-exchanging ATPase 12A [Homo sapiens]
          Length = 1039

 Score =  172 bits (437), Expect = 9e-44
 Identities = 84/166 (50%), Positives = 114/166 (68%), Gaps = 1/166 (0%)

Query: 1    MIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTC 60
            ++QAL  F  YF + A+ GF P  L+ +R+ WE  Y+NDL+DSYGQ+WT  QR+ +E+T 
Sbjct: 874  LMQALGAFLVYFTVYAQEGFLPRTLINLRVEWEKDYVNDLKDSYGQEWTRYQREYLEWTG 933

Query: 61   QTAFFVTIVVVQWADLIISKTRRNSLFQQGM-RNKVLIFGILEETLLAAFLSYTPGMDVA 119
             TAFFV I+V Q ADLII KTRRNS+FQQG+ RNKV+  GI  + ++   LSY  G   A
Sbjct: 934  YTAFFVGILVQQIADLIIRKTRRNSIFQQGLFRNKVIWVGITSQIIIGLILSYGLGSVTA 993

Query: 120  LRMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDGWVERETYY 165
            L    L+  +W  A+P++ILI+VYDE+RKL IR +P  W ++  YY
Sbjct: 994  LSFTMLRAQYWFVAVPHAILIWVYDEVRKLFIRLYPGSWWDKNMYY 1039


>gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [Homo
           sapiens]
          Length = 997

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLS-YTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +      + + G +  ++   FL  Y   + +  ++ PL 
Sbjct: 903 LVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 962

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
           +T WL  +  S+ + + DE  K + R +
Sbjct: 963 VTQWLMVLKISLPVILMDETLKFVARNY 990


>gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1
           [Homo sapiens]
          Length = 1042

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLS-YTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +      + + G +  ++   FL  Y   + +  ++ PL 
Sbjct: 903 LVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 962

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
           +T WL  +  S+ + + DE  K + R +
Sbjct: 963 VTQWLMVLKISLPVILMDETLKFVARNY 990


>gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3
           [Homo sapiens]
          Length = 1015

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLS-YTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +      + + G +  ++   FL  Y   + +  ++ PL 
Sbjct: 876 LVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLN 935

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
           +T WL  +  S+ + + DE  K + R +
Sbjct: 936 VTQWLMVLKISLPVILMDETLKFVARNY 963


>gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b
           [Homo sapiens]
          Length = 994

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 30/169 (17%), Positives = 67/169 (39%), Gaps = 14/169 (8%)

Query: 3   QALAGFFTYFVILAENGFRPVDLLGIRLHW-----EDKYLNDLEDSYGQQWTYEQRKVVE 57
           + L   + +F  +A  G+     +G    W     +  ++N  + ++  Q T +      
Sbjct: 826 EPLISGWLFFRYMAIGGYVGAATVGAAAWWFLYAEDGPHVNYSQLTHFMQCTEDNTHFEG 885

Query: 58  FTCQ--------TAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAF 109
             C+        T     +V ++  + + S +   SL +      + + G +  ++   F
Sbjct: 886 IDCEVFEAPEPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWVNIWLLGSICLSMSLHF 945

Query: 110 LS-YTPGMDVALRMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQHPDG 157
           L  Y   + +  ++  L +T WL  +  S+ +   DEI K + R + +G
Sbjct: 946 LILYVDPLPMIFKLRALDLTQWLMVLKISLPVIGLDEILKFVARNYLEG 994


>gi|28373103 ATPase, Ca++ transporting, ubiquitous isoform a [Homo
           sapiens]
          Length = 999

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373115 ATPase, Ca++ transporting, ubiquitous isoform c [Homo
           sapiens]
          Length = 1029

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373113 ATPase, Ca++ transporting, ubiquitous isoform f [Homo
           sapiens]
          Length = 998

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373111 ATPase, Ca++ transporting, ubiquitous isoform c [Homo
           sapiens]
          Length = 1029

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373109 ATPase, Ca++ transporting, ubiquitous isoform b [Homo
           sapiens]
          Length = 1043

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373107 ATPase, Ca++ transporting, ubiquitous isoform d [Homo
           sapiens]
          Length = 1044

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|28373105 ATPase, Ca++ transporting, ubiquitous isoform e [Homo
           sapiens]
          Length = 1052

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 68  IVVVQWADLIISKTRRNSLFQQG-MRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           +V ++  + + S +   SL +     N  L+  +     L   +   P + +  ++ PL 
Sbjct: 904 LVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLILLVPPLPLIFQVTPLS 963

Query: 127 ITWWLCAIPYSILIFVYDEIRKLLIRQH 154
              W+  +  S+ + + DE  K L R H
Sbjct: 964 GRQWVVVLQISLPVILLDEALKYLSRNH 991


>gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a
           [Homo sapiens]
          Length = 1001

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 14/166 (8%)

Query: 3   QALAGFFTYFVILAENGFRPVDLLGIRLHW-----EDKYLNDLEDSYGQQWTYEQRKVVE 57
           + L   + +F  +A  G+     +G    W     +  ++N  + ++  Q T +      
Sbjct: 826 EPLISGWLFFRYMAIGGYVGAATVGAAAWWFLYAEDGPHVNYSQLTHFMQCTEDNTHFEG 885

Query: 58  FTCQ--------TAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAF 109
             C+        T     +V ++  + + S +   SL +      + + G +  ++   F
Sbjct: 886 IDCEVFEAPEPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWVNIWLLGSICLSMSLHF 945

Query: 110 LS-YTPGMDVALRMYPLKITWWLCAIPYSILIFVYDEIRKLLIRQH 154
           L  Y   + +  ++  L +T WL  +  S+ +   DEI K + R +
Sbjct: 946 LILYVDPLPMIFKLRALDLTQWLMVLKISLPVIGLDEILKFVARNY 991


>gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 30  LHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQ 89
           +H  DK+ N  +D  G    YE+     +T +  F    V+     L +   R  S+F Q
Sbjct: 416 VHPTDKFCN--KDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQ 473

Query: 90  GMRNKV 95
            +RN +
Sbjct: 474 AIRNTI 479


>gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 30  LHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQ 89
           +H  DK+ N  +D  G    YE+     +T +  F    V+     L +   R  S+F Q
Sbjct: 416 VHPTDKFCN--KDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQ 473

Query: 90  GMRNKV 95
            +RN +
Sbjct: 474 AIRNTI 479


>gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 30  LHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQ 89
           +H  DK+ N  +D  G    YE+     +T +  F    V+     L +   R  S+F Q
Sbjct: 416 VHPTDKFCN--KDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQ 473

Query: 90  GMRNKV 95
            +RN +
Sbjct: 474 AIRNTI 479


>gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 583

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 69  VVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           VV   A L +++ R+  L Q+G   +VL    +++   AA L  T    + LR  PL+
Sbjct: 488 VVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILRPQPLR 545


>gi|169215109 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 583

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 69  VVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           VV   A L +++ R+  L Q+G   +VL    +++   AA L  T    + LR  PL+
Sbjct: 488 VVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILRPQPLR 545


>gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 583

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 69  VVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLK 126
           VV   A L +++ R+  L Q+G   +VL    +++   AA L  T    + LR  PL+
Sbjct: 488 VVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILRPQPLR 545


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.143    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,779,491
Number of Sequences: 37866
Number of extensions: 213867
Number of successful extensions: 543
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 518
Number of HSP's gapped (non-prelim): 27
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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