Search of human proteins with 4885287

Search of human proteins with 4885287

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4885287 guanine nucleotide binding protein (G protein),
gamma 5 [Homo sapiens]
         (68 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4885287 guanine nucleotide binding protein (G protein), gamma...   134   2e-32
gi|63055067 guanine nucleotide binding protein (G protein), gamm...    80   3e-16
gi|32698769 guanine nucleotide binding protein (G protein), gamm...    79   6e-16
gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo ...    73   4e-14
gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo ...    73   4e-14
gi|51036603 G-protein gamma-12 subunit [Homo sapiens]                  72   7e-14
gi|54114974 guanine nucleotide binding protein (G protein), gamm...    69   6e-13
gi|6912394 guanine nucleotide binding protein (G protein), gamma...    64   3e-11
gi|148922937 guanine nucleotide binding protein (G protein), gam...    64   3e-11
gi|148922892 guanine nucleotide binding protein (G protein), gam...    64   3e-11
gi|4758450 guanine nucleotide binding protein (G protein), gamma...    64   3e-11
gi|15147246 guanine nucleotide binding protein (G protein), gamm...    62   1e-10
gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]                       54   3e-08
gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]           52   8e-08
gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]           52   8e-08
gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]           52   8e-08
gi|4758448 guanine nucleotide binding protein gamma 11 precursor...    44   4e-05
gi|14589849 guanine nucleotide binding protein-gamma transducing...    42   1e-04
gi|11386179 guanine nucleotide binding protein (G protein), gamm...    39   0.001
gi|34452688 regulator of G-protein signalling 11 isoform 1 [Homo...    32   0.11 
gi|4506507 regulator of G-protein signalling 11 isoform 2 [Homo ...    32   0.11 
gi|7706567 guanine nucleotide binding protein (G protein), gamma...    28   1.6  

>gi|4885287 guanine nucleotide binding protein (G protein), gamma
          5 [Homo sapiens]
          Length = 68

 Score =  134 bits (337), Expect = 2e-32
 Identities = 68/68 (100%), Positives = 68/68 (100%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR
Sbjct: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60

Query: 61 PQKVCSFL 68
          PQKVCSFL
Sbjct: 61 PQKVCSFL 68


>gi|63055067 guanine nucleotide binding protein (G protein), gamma
          10 [Homo sapiens]
          Length = 68

 Score = 80.5 bits (197), Expect = 3e-16
 Identities = 36/68 (52%), Positives = 54/68 (79%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          MS  +S +A++++V+QL+LEAG+ R+KVSQAAA+L+Q+C+QNA  D LL GV + +NPFR
Sbjct: 1  MSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFR 60

Query: 61 PQKVCSFL 68
            + C+ L
Sbjct: 61 EPRSCALL 68


>gi|32698769 guanine nucleotide binding protein (G protein), gamma
          7 [Homo sapiens]
          Length = 68

 Score = 79.3 bits (194), Expect = 6e-16
 Identities = 35/68 (51%), Positives = 54/68 (79%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          MS ++++A  +K+V+QLR+EAG+ R+KVS+AA+DL  +C Q+A++DPLL GV +S NPF+
Sbjct: 1  MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFK 60

Query: 61 PQKVCSFL 68
           +K C  L
Sbjct: 61 DKKPCIIL 68


>gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo
          sapiens]
          Length = 68

 Score = 73.2 bits (178), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 51/68 (75%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          MS  +S +A++ +V+QL+LEAG+ R+ VSQAAA+L+Q+C+QNA  D LL GV + +NPF 
Sbjct: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60

Query: 61 PQKVCSFL 68
            + C+ L
Sbjct: 61 EPRSCALL 68


>gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo
          sapiens]
          Length = 68

 Score = 73.2 bits (178), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 51/68 (75%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          MS  +S +A++ +V+QL+LEAG+ R+ VSQAAA+L+Q+C+QNA  D LL GV + +NPF 
Sbjct: 1  MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFW 60

Query: 61 PQKVCSFL 68
            + C+ L
Sbjct: 61 EPRSCALL 68


>gi|51036603 G-protein gamma-12 subunit [Homo sapiens]
          Length = 72

 Score = 72.4 bits (176), Expect = 7e-14
 Identities = 31/67 (46%), Positives = 50/67 (74%)

Query: 2  SGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRP 61
          + ++++A  ++ VQQLRLEA + R+KVS+A+ADL  +C ++A+ DPLL G+ +S NPF+ 
Sbjct: 6  ASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKD 65

Query: 62 QKVCSFL 68
          +K C  L
Sbjct: 66 KKTCIIL 72


>gi|54114974 guanine nucleotide binding protein (G protein), gamma
          2 [Homo sapiens]
          Length = 71

 Score = 69.3 bits (168), Expect = 6e-13
 Identities = 33/68 (48%), Positives = 52/68 (76%), Gaps = 1/68 (1%)

Query: 2  SGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRP 61
          + ++S+A  +K+V+QL++EA ++R+KVS+AAADL  +C  +A+ DPLLT V +S NPFR 
Sbjct: 4  NNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFRE 63

Query: 62 QK-VCSFL 68
          +K  C+ L
Sbjct: 64 KKFFCAIL 71


>gi|6912394 guanine nucleotide binding protein (G protein), gamma
          3 [Homo sapiens]
          Length = 75

 Score = 63.9 bits (154), Expect = 3e-11
 Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)

Query: 1  MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFR 60
          ++ + S+   +K+V+QL++EA L R+KVS+AAADL  +C  +A  DPL+T V +S NPFR
Sbjct: 7  VNSTMSIGQARKMVEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFR 66

Query: 61 PQK-VCSFL 68
           +K  C+ L
Sbjct: 67 EKKFFCALL 75


>gi|148922937 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 2  SGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRP 61
          + ++S++  +K V+QL++EA ++RVKVSQAAADL  +C  + + DPL+  V +S NPFR 
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 QK-VCSFL 68
          +K  C+ L
Sbjct: 68 KKFFCTIL 75


>gi|148922892 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 2  SGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRP 61
          + ++S++  +K V+QL++EA ++RVKVSQAAADL  +C  + + DPL+  V +S NPFR 
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 QK-VCSFL 68
          +K  C+ L
Sbjct: 68 KKFFCTIL 75


>gi|4758450 guanine nucleotide binding protein (G protein), gamma
          4 [Homo sapiens]
          Length = 75

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 2  SGSSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRP 61
          + ++S++  +K V+QL++EA ++RVKVSQAAADL  +C  + + DPL+  V +S NPFR 
Sbjct: 8  NSTTSISQARKAVEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFRE 67

Query: 62 QK-VCSFL 68
          +K  C+ L
Sbjct: 68 KKFFCTIL 75


>gi|15147246 guanine nucleotide binding protein (G protein), gamma
          8 [Homo sapiens]
          Length = 70

 Score = 62.0 bits (149), Expect = 1e-10
 Identities = 28/60 (46%), Positives = 45/60 (75%)

Query: 5  SSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKV 64
          + +A  +K V+QL+LE  ++R+KVSQAAA+L  FC  +A+ DPL+T V ++ NPFR +++
Sbjct: 6  AKIAEARKTVEQLKLEVNIDRMKVSQAAAELLAFCETHAKDDPLVTPVPAAENPFRDKRL 65


>gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]
          Length = 153

 Score = 53.9 bits (128), Expect = 3e-08
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query: 26  VKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKVCSFL 68
           +KVSQAAA+L+Q+C+QNA  D LL GV + +NPFR  + C+ L
Sbjct: 111 LKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCALL 153


>gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 52.4 bits (124), Expect = 8e-08
 Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 4  SSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQK 63
          +S +      V+QL++EAG+++VK+   AADL +FC + A++DP L G+ ++TN F+ +K
Sbjct: 8  NSDIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKK 64

Query: 64 VCSFL 68
            + L
Sbjct: 65 PYAIL 69


>gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 52.4 bits (124), Expect = 8e-08
 Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 4  SSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQK 63
          +S +      V+QL++EAG+++VK+   AADL +FC + A++DP L G+ ++TN F+ +K
Sbjct: 8  NSDIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKK 64

Query: 64 VCSFL 68
            + L
Sbjct: 65 PYAIL 69


>gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 52.4 bits (124), Expect = 8e-08
 Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 4  SSSVAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQK 63
          +S +      V+QL++EAG+++VK+   AADL +FC + A++DP L G+ ++TN F+ +K
Sbjct: 8  NSDIGQALWAVEQLQMEAGIDQVKM---AADLLKFCTEQAKNDPFLVGIPAATNSFKEKK 64

Query: 64 VCSFL 68
            + L
Sbjct: 65 PYAIL 69


>gi|4758448 guanine nucleotide binding protein gamma 11 precursor
          [Homo sapiens]
          Length = 73

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 10 MKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKVC 65
          +K  V+QLR E  L R +VS+ + ++K +  + +  DPL+ G+    NPF+ +  C
Sbjct: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSC 70


>gi|14589849 guanine nucleotide binding protein-gamma transducing
          activity polypeptide 2 [Homo sapiens]
          Length = 69

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 10 MKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKVC 65
          +K  V+QL+ E    R+ +S+A  ++K++    A +DP L G+    NPF+ +  C
Sbjct: 11 LKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPFKEKGGC 66


>gi|11386179 guanine nucleotide binding protein (G protein), gamma
          transducing activity polypeptide 1 [Homo sapiens]
          Length = 74

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 10 MKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQK 63
          +K  V QL+ E  L R+ VS+   +++ +  + +  DPL+ G+    NPF+  K
Sbjct: 15 LKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELK 68


>gi|34452688 regulator of G-protein signalling 11 isoform 1 [Homo
           sapiens]
          Length = 467

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 11  KKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPF 59
           K+ ++  R   G  RVK S        FC Q   HDPL++G   S NP+
Sbjct: 227 KREIEYFRKALGRTRVKSSVCLEAYLSFCGQRGPHDPLVSGCLPS-NPW 274


>gi|4506507 regulator of G-protein signalling 11 isoform 2 [Homo
           sapiens]
          Length = 446

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 11  KKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPF 59
           K+ ++  R   G  RVK S        FC Q   HDPL++G   S NP+
Sbjct: 206 KREIEYFRKALGRTRVKSSVCLEAYLSFCGQRGPHDPLVSGCLPS-NPW 253


>gi|7706567 guanine nucleotide binding protein (G protein), gamma
          13 [Homo sapiens]
          Length = 67

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 7  VAAMKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKVCS 66
          V  MKK V+ L+ +    R   S+   +L ++       DP L       NP+  +  C+
Sbjct: 6  VPQMKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKGKCT 65

Query: 67 FL 68
           L
Sbjct: 66 IL 67


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.126    0.346 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,042,337
Number of Sequences: 37866
Number of extensions: 52308
Number of successful extensions: 165
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140
Number of HSP's gapped (non-prelim): 22
length of query: 68
length of database: 18,247,518
effective HSP length: 41
effective length of query: 27
effective length of database: 16,695,012
effective search space: 450765324
effective search space used: 450765324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.