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Search of human proteins with 13375846
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13375846 2-oxoglutarate and iron-dependent oxygenase domain
containing 2 [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13375846 2-oxoglutarate and iron-dependent oxygenase domain c... 592 e-169
gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens] 57 2e-08
gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 pr... 46 3e-05
gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i... 44 1e-04
gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 i... 44 1e-04
gi|44955929 calmodulin regulated spectrin-associated protein 1-l... 33 0.29
gi|45827701 pad-1-like [Homo sapiens] 30 2.5
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 30 3.2
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 30 3.2
gi|224922791 amidohydrolase domain containing 2 isoform 2 [Homo ... 29 5.5
gi|21361513 amidohydrolase domain containing 2 isoform 1 [Homo s... 29 5.5
gi|239740995 PREDICTED: hypothetical protein XP_002342058 [Homo ... 28 7.2
gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens] 28 7.2
gi|73695475 protein BAP28 [Homo sapiens] 28 7.2
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
>gi|13375846 2-oxoglutarate and iron-dependent oxygenase domain
containing 2 [Homo sapiens]
Length = 290
Score = 592 bits (1526), Expect = e-169
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MVELEQEVERRQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPD 60
MVELEQEVERRQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPD
Sbjct: 1 MVELEQEVERRQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPD 60
Query: 61 ADLKGLLQRLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNYGVLL 120
ADLKGLLQRLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNYGVLL
Sbjct: 61 ADLKGLLQRLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNYGVLL 120
Query: 121 HELGLDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAE 180
HELGLDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAE
Sbjct: 121 HELGLDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAE 180
Query: 181 LTLNVALGKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGER 240
LTLNVALGKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGER
Sbjct: 181 LTLNVALGKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGER 240
Query: 241 WNLVVWLRASAVRNSLCPMCCREPDLVDDEGFGDGFTREEPATVDVCALT 290
WNLVVWLRASAVRNSLCPMCCREPDLVDDEGFGDGFTREEPATVDVCALT
Sbjct: 241 WNLVVWLRASAVRNSLCPMCCREPDLVDDEGFGDGFTREEPATVDVCALT 290
>gi|32307144 lysyl hydroxylase 1 precursor [Homo sapiens]
Length = 727
Score = 57.0 bits (136), Expect = 2e-08
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 79 IYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMN-------NYGVLLHELGLDEPLMT 131
+Y P+FT C L+EE+EHF Q + + N + + ++++G +
Sbjct: 555 VYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENVPTIDIHMNQIGFEREWHK 614
Query: 132 PLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVALGKVF 191
L E ++ P+ LYP R AFVV+Y P + L H+D + T+N+AL +V
Sbjct: 615 FLLE-YIAPMTEKLYPGY-YTRAQFDLAFVVRYKPDEQPSLMPHHDASTFTINIALNRV- 671
Query: 192 TGGALYFGG 200
G Y GG
Sbjct: 672 --GVDYEGG 678
>gi|4505891 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
precursor [Homo sapiens]
Length = 738
Score = 46.2 bits (108), Expect = 3e-05
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 79 IYRVPVFTAPFCQALLEELEHF--------EQSDMPKGRPNTMNNYGVLLHELGLDEPLM 130
+Y P+ + C L+ E+EH+ E S + G N + + + ++G ++ +
Sbjct: 566 VYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYEN-VPTVDIHMKQVGYEDQWL 624
Query: 131 TPLRERFLQPLMALLYPDCGGGRLDSHRA---FVVKYAPGQDLELGCHYDNAELTLNVAL 187
LR ++ P+ L+P G RA FVV+Y P + L H+D++ TLNVAL
Sbjct: 625 QLLRT-YVGPMTESLFP----GYHTKARAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVAL 679
Query: 188 ---GKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRG--GQLHGARPLGTGERWN 242
G + GG F + ++ P + G +LH G H P G R+
Sbjct: 680 NHKGLDYEGGGCRF---LRYDCVISSPRK-----GWALLHPGRLTHYHEGLPTTWGTRYI 731
Query: 243 LV 244
+V
Sbjct: 732 MV 733
>gi|62739166 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
isoform b precursor [Homo sapiens]
Length = 737
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 79 IYRVPVFTAPFCQALLEELEHF--------EQSDMPKGRPNTMNNYGVLLHELGLDEPLM 130
++ P+F+ C L+EE+EH+ S + G N + + + ++ L+ +
Sbjct: 565 VFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTD-DIHMKQVDLENVWL 623
Query: 131 TPLRERFLQPLMALL---YPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVAL 187
+RE F+ P+ + Y G L+ FVVKY+P + L H+D + T+N+AL
Sbjct: 624 HFIRE-FIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHDASTFTINIAL 678
Query: 188 ---GKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRG--GQLHGARPLGTGERWN 242
G+ F GG F + ++ P + G +H G LH P+ G R+
Sbjct: 679 NNVGEDFQGGGCKF---LRYNCSIESPRK-----GWSFMHPGRLTHLHEGLPVKNGTRYI 730
Query: 243 LVVWL 247
V ++
Sbjct: 731 AVSFI 735
>gi|33636742 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
isoform a precursor [Homo sapiens]
Length = 758
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 30/185 (16%)
Query: 79 IYRVPVFTAPFCQALLEELEHF--------EQSDMPKGRPNTMNNYGVLLHELGLDEPLM 130
++ P+F+ C L+EE+EH+ S + G N + + + ++ L+ +
Sbjct: 586 VFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTD-DIHMKQVDLENVWL 644
Query: 131 TPLRERFLQPLMALL---YPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVAL 187
+RE F+ P+ + Y G L+ FVVKY+P + L H+D + T+N+AL
Sbjct: 645 HFIRE-FIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHDASTFTINIAL 699
Query: 188 ---GKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRG--GQLHGARPLGTGERWN 242
G+ F GG F + ++ P + G +H G LH P+ G R+
Sbjct: 700 NNVGEDFQGGGCKF---LRYNCSIESPRK-----GWSFMHPGRLTHLHEGLPVKNGTRYI 751
Query: 243 LVVWL 247
V ++
Sbjct: 752 AVSFI 756
>gi|44955929 calmodulin regulated spectrin-associated protein 1-like
1 [Homo sapiens]
Length = 1478
Score = 33.1 bits (74), Expect = 0.29
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 1 MVELEQEVERRQRL----GQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYS 56
++E EQ+++ + GQ++ RK P P V + L+D A+ +
Sbjct: 195 IMEQEQKLKEHHTVEAPGGQKARYRKEQTLLKQLPCIPLVENLLKDGTDGCALAALIHFY 254
Query: 57 VSPDADLKGLLQRLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNY 116
L+ + + ET+S +Y + + FCQ L + HF DM + +NY
Sbjct: 255 CPDVVRLEDICLK-ETMSLADSLYNLQLIQE-FCQEYLNQCCHFTLEDMLYAASSIKSNY 312
Query: 117 GVLLHEL 123
V + EL
Sbjct: 313 LVFMAEL 319
>gi|45827701 pad-1-like [Homo sapiens]
Length = 2298
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 116 YGVLLHELGLDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPG--QDLELG 173
+ +L H P++ L E++ PL LL P S +AF+V PG + E+
Sbjct: 111 FPLLAHAAVSVRPVLLTLYEKYFLPLQKLLLP--------SLQAFIVGLLPGLEEGSEIS 162
Query: 174 CHYDNAELTLNVALGKVFTGGALYFGGLFQAPT 206
D L L++ +GK AL+ G + +P+
Sbjct: 163 DRTDALLLRLSLVVGKEVFYTALW-GSVLASPS 194
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 29.6 bits (65), Expect = 3.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 VELEQEVERRQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDA 61
+E+ E ++ + L ES +KA A+ A PE+ D +Q L E + S A
Sbjct: 699 LEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQH--LEREITRYKDESSKAQA 756
Query: 62 DLKGLLQRLETVSEEK 77
++ LL+ L+ V EK
Sbjct: 757 EVDRLLEILKEVENEK 772
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 29.6 bits (65), Expect = 3.2
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 VELEQEVERRQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDA 61
+E+ E ++ + L ES +KA A+ A PE+ D +Q L E + S A
Sbjct: 671 LEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQH--LEREITRYKDESSKAQA 728
Query: 62 DLKGLLQRLETVSEEK 77
++ LL+ L+ V EK
Sbjct: 729 EVDRLLEILKEVENEK 744
>gi|224922791 amidohydrolase domain containing 2 isoform 2 [Homo
sapiens]
Length = 594
Score = 28.9 bits (63), Expect = 5.5
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 148 DCGGGRLDSHRAFVVKYAPGQ-DLEL--GCHYDNAELTLNVALGKVFTGGALYFGGLFQ- 203
DCGG L APG D+++ G D ++ T +V G + G+
Sbjct: 57 DCGGRIL----------APGFIDVQINGGFGVDFSQATEDVGSGVALVARRILSHGVTSF 106
Query: 204 APTALTEPLEVEHVVGQGVLHRGGQLHGARPLG 236
PT +T P EV H V + + G HGA LG
Sbjct: 107 CPTLVTSPPEVYHKVVPQIPVKSGGPHGAGVLG 139
>gi|21361513 amidohydrolase domain containing 2 isoform 1 [Homo
sapiens]
Length = 439
Score = 28.9 bits (63), Expect = 5.5
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Query: 148 DCGGGRLDSHRAFVVKYAPGQ-DLEL--GCHYDNAELTLNVALGKVFTGGALYFGGLFQ- 203
DCGG L APG D+++ G D ++ T +V G + G+
Sbjct: 57 DCGGRIL----------APGFIDVQINGGFGVDFSQATEDVGSGVALVARRILSHGVTSF 106
Query: 204 APTALTEPLEVEHVVGQGVLHRGGQLHGARPLG 236
PT +T P EV H V + + G HGA LG
Sbjct: 107 CPTLVTSPPEVYHKVVPQIPVKSGGPHGAGVLG 139
>gi|239740995 PREDICTED: hypothetical protein XP_002342058 [Homo
sapiens]
Length = 361
Score = 28.5 bits (62), Expect = 7.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 11 RQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYS 56
R+R G+ A + ++S HPARP V S++ AL E A T S
Sbjct: 128 RRRPGRSLATQNCQLSSRLHPARPPV-GSVRSCALLEEPAAPTASS 172
>gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens]
Length = 309
Score = 28.5 bits (62), Expect = 7.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Query: 221 GVLHRGGQLHGARPLGTGERWNLVVWLRASAVRNSLCPMCC 261
G+LH+G G PL VVW+ A R CP CC
Sbjct: 85 GILHQGSAEQG--PLTVH-----VVWVNHGAFRLQWCPKCC 118
>gi|73695475 protein BAP28 [Homo sapiens]
Length = 2144
Score = 28.5 bits (62), Expect = 7.2
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 13/138 (9%)
Query: 12 QRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAV---TEYSVSPDADLKGLLQ 68
+R +++ AL+ + + E Q +L P L T VS + L L
Sbjct: 1703 ERKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPSLLTTMKNTSELVSSEVYLLSALA 1762
Query: 69 RLETVSEEKRIYRVPVFTAPFCQALLEELEHFEQSDMPKGRPNTMNNYGVLLHELGLDEP 128
L+ V E +P F +P+ + +L ++ H E+ G + N + L +
Sbjct: 1763 ALQKVVET-----LPHFISPYLEGILSQVIHLEKITSEMGSASQAN-----IRLTSLKKT 1812
Query: 129 LMTPLRERFLQPLMALLY 146
L T L R L P + Y
Sbjct: 1813 LATTLAPRVLLPAIKKTY 1830
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 28.1 bits (61), Expect = 9.4
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 224 HRGGQLHGARPLGTGERWNLVVWLRASAVRNSLCPMCCREPDL 266
H GG L GA G+GE R S R+S P CR L
Sbjct: 614 HEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASL 656
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 28.1 bits (61), Expect = 9.4
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 224 HRGGQLHGARPLGTGERWNLVVWLRASAVRNSLCPMCCREPDL 266
H GG L GA G+GE R S R+S P CR L
Sbjct: 614 HEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASL 656
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,109,068
Number of Sequences: 37866
Number of extensions: 573179
Number of successful extensions: 1061
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1047
Number of HSP's gapped (non-prelim): 20
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.