Guide to the Human Genome
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Name: SRD5A3 Sequence: fasta or formatted (318aa) NCBI GI: 13375785
Description:

steroid 5 alpha-reductase 3

Referenced in:

Protein Glycosylation
Steroid Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         25           2
 C cysteine            2.5          8           1
 D aspartate           1.3          4           1
 E glutamate           2.2          7           1
 F phenylalanine       8.8         28           2
 G glycine             6.0         19           2
 H histidine           4.1         13           1
 I isoleucine          4.1         13           2
 K lysine              3.5         11           1
 L leucine            15.7         50           3
 M methionine          2.8          9           3
 N asparagine          3.8         12           1
 P proline             4.7         15           2
 Q glutamine           3.5         11           1
 R arginine            4.1         13           2
 S serine              6.3         20           2
 T threonine           3.1         10           1
 V valine              7.9         25           2
 W tryptophan          3.5         11           2
 Y tyrosine            4.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   steroid 5 alpha-reductase 3 
SRD5A2                0.056   3-oxo-5 alpha-steroid 4-dehydrogenase 2 
SRD5A1                0.039   steroid-5-alpha-reductase 1 
SRD5A2L2              0.014   steroid 5 alpha-reductase 2-like 2 
LOC100294376          0.013   PREDICTED: similar to hCG16318 
GPSN2                 0.013   glycoprotein, synaptic 2 
LOC100128267          0.011   PREDICTED: hypothetical protein, partial 
MPV17L                0.008   MPV17 mitochondrial membrane protein-like isoform 1...
SLC15A3               0.008   solute carrier family 15, member 3 
SLC9A11               0.008   solute carrier family 9, member 11 
LOC100293423          0.006   PREDICTED: hypothetical protein 
LOC100290837          0.006   PREDICTED: hypothetical protein XP_002347267 
LOC100289388          0.006   PREDICTED: hypothetical protein XP_002343124 
LOC100287219          0.006   PREDICTED: hypothetical protein XP_002342512, parti...
IGFBPL1               0.006   insulin-like growth factor binding protein-like 1 [H...
LBR                   0.005   lamin B receptor 
LBR                   0.005   lamin B receptor 
C18orf45              0.005   hypothetical protein LOC85019 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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