Search of human proteins with 4758638

Search of human proteins with 4758638

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758638 peroxiredoxin 6 [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758638 peroxiredoxin 6 [Homo sapiens]                             456   e-129
gi|169205475 PREDICTED: similar to peroxiredoxin 6 [Homo sapiens]     167   9e-42
gi|32189392 peroxiredoxin 2 isoform a [Homo sapiens]                   81   8e-16
gi|32455266 peroxiredoxin 1 [Homo sapiens]                             80   2e-15
gi|32455264 peroxiredoxin 1 [Homo sapiens]                             80   2e-15
gi|4505591 peroxiredoxin 1 [Homo sapiens]                              80   2e-15
gi|5802974 peroxiredoxin 3 isoform a precursor [Homo sapiens]          64   8e-11
gi|32483377 peroxiredoxin 3 isoform b [Homo sapiens]                   64   8e-11
gi|5453549 peroxiredoxin 4 [Homo sapiens]                              64   8e-11
gi|33188454 peroxiredoxin 2 isoform c [Homo sapiens]                   53   2e-07
gi|239757765 PREDICTED: similar to thioredoxin peroxidase [Homo ...    47   1e-05
gi|145580586 kintoun isoform 2 [Homo sapiens]                          32   0.44 
gi|145580588 kintoun isoform 1 [Homo sapiens]                          32   0.44 
gi|224282165 zinc finger protein 200 isoform 3 [Homo sapiens]          32   0.44 
gi|224282163 zinc finger protein 200 isoform 3 [Homo sapiens]          32   0.44 
gi|224282161 zinc finger protein 200 isoform 3 [Homo sapiens]          32   0.44 
gi|37675270 zinc finger protein 200 isoform 1 [Homo sapiens]           29   3.7  
gi|37675273 zinc finger protein 200 isoform 1 [Homo sapiens]           29   3.7  
gi|7019499 peroxisome proliferator-activated receptor gamma, coa...    28   4.9  
gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [H...    28   6.3  
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]         28   8.3  
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]         28   8.3  
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]         28   8.3  
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]         28   8.3  
gi|8922528 kelch-like 11 [Homo sapiens]                                28   8.3  

>gi|4758638 peroxiredoxin 6 [Homo sapiens]
          Length = 224

 Score =  456 bits (1172), Expect = e-129
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPE 60
           MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPE
Sbjct: 1   MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPE 60

Query: 61  FAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPA 120
           FAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPA
Sbjct: 61  FAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPA 120

Query: 121 EKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVD 180
           EKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVD
Sbjct: 121 EKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVD 180

Query: 181 WKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP 224
           WKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP
Sbjct: 181 WKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP 224


>gi|169205475 PREDICTED: similar to peroxiredoxin 6 [Homo sapiens]
          Length = 137

 Score =  167 bits (422), Expect = 9e-42
 Identities = 82/110 (74%), Positives = 91/110 (82%)

Query: 26  HDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKD 85
           HDFLGDS GILFSHPRD  PVCT ELGRAAKLAPEF K NVKLIAL+ DS EDHLAWSKD
Sbjct: 25  HDFLGDSCGILFSHPRDSKPVCTMELGRAAKLAPEFTKSNVKLIALATDSAEDHLAWSKD 84

Query: 86  INAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVF 135
           INAYN +E TEK PFP ID ++++LA+LLGMLDP E +EKGM V A  V+
Sbjct: 85  INAYNSDERTEKCPFPNIDGKDQDLAVLLGMLDPPELEEKGMGVRAYGVY 134


>gi|32189392 peroxiredoxin 2 isoform a [Homo sapiens]
          Length = 198

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 17/206 (8%)

Query: 3   GGLLLGDVAPNFEANTTVG----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLA 58
           G   +G  AP+F+A   V      ++  D+ G  + +LF +P DFT VC TE+   +  A
Sbjct: 4   GNARIGKPAPDFKATAVVDGAFKEVKLSDYKG-KYVVLFFYPLDFTFVCPTEIIAFSNRA 62

Query: 59  PEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLD 118
            +F K   +++ +S+DS   HLAW   IN    E     L  P++ D  R L+   G+L 
Sbjct: 63  EDFRKLGCEVLGVSVDSQFTHLAW---INTPRKEGGLGPLNIPLLADVTRRLSEDYGVL- 118

Query: 119 PAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP 178
              K ++G  +  R +F+      L+   +     GR+ DE LR+V + Q T E     P
Sbjct: 119 ---KTDEG--IAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCP 173

Query: 179 VDWKDGDSVMVLPTIPEEEAKKLFPK 204
             WK G S  + P +  +++K+ F K
Sbjct: 174 AGWKPG-SDTIKPNV--DDSKEYFSK 196


>gi|32455266 peroxiredoxin 1 [Homo sapiens]
          Length = 199

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 16/206 (7%)

Query: 3   GGLLLGDVAPNFEANTTVGRIRFHDF-LGDSWG---ILFSHPRDFTPVCTTELGRAAKLA 58
           G   +G  APNF+A   +   +F D  L D  G   + F +P DFT VC TE+   +  A
Sbjct: 4   GNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRA 63

Query: 59  PEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLD 118
            EF K N ++I  S+DS   HLAW   +N    +     +  P++ D  R +A   G+L 
Sbjct: 64  EEFKKLNCQVIGASVDSHFCHLAW---VNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVL- 119

Query: 119 PAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP 178
              K ++G  ++ R +F+      L+   +     GR+ DE LR+V + Q T +     P
Sbjct: 120 ---KADEG--ISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCP 174

Query: 179 VDWKDGDSVMVLPTIPEEEAKKLFPK 204
             WK G S  + P +  +++K+ F K
Sbjct: 175 AGWKPG-SDTIKPDV--QKSKEYFSK 197


>gi|32455264 peroxiredoxin 1 [Homo sapiens]
          Length = 199

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 16/206 (7%)

Query: 3   GGLLLGDVAPNFEANTTVGRIRFHDF-LGDSWG---ILFSHPRDFTPVCTTELGRAAKLA 58
           G   +G  APNF+A   +   +F D  L D  G   + F +P DFT VC TE+   +  A
Sbjct: 4   GNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRA 63

Query: 59  PEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLD 118
            EF K N ++I  S+DS   HLAW   +N    +     +  P++ D  R +A   G+L 
Sbjct: 64  EEFKKLNCQVIGASVDSHFCHLAW---VNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVL- 119

Query: 119 PAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP 178
              K ++G  ++ R +F+      L+   +     GR+ DE LR+V + Q T +     P
Sbjct: 120 ---KADEG--ISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCP 174

Query: 179 VDWKDGDSVMVLPTIPEEEAKKLFPK 204
             WK G S  + P +  +++K+ F K
Sbjct: 175 AGWKPG-SDTIKPDV--QKSKEYFSK 197


>gi|4505591 peroxiredoxin 1 [Homo sapiens]
          Length = 199

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 16/206 (7%)

Query: 3   GGLLLGDVAPNFEANTTVGRIRFHDF-LGDSWG---ILFSHPRDFTPVCTTELGRAAKLA 58
           G   +G  APNF+A   +   +F D  L D  G   + F +P DFT VC TE+   +  A
Sbjct: 4   GNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRA 63

Query: 59  PEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLD 118
            EF K N ++I  S+DS   HLAW   +N    +     +  P++ D  R +A   G+L 
Sbjct: 64  EEFKKLNCQVIGASVDSHFCHLAW---VNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVL- 119

Query: 119 PAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP 178
              K ++G  ++ R +F+      L+   +     GR+ DE LR+V + Q T +     P
Sbjct: 120 ---KADEG--ISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCP 174

Query: 179 VDWKDGDSVMVLPTIPEEEAKKLFPK 204
             WK G S  + P +  +++K+ F K
Sbjct: 175 AGWKPG-SDTIKPDV--QKSKEYFSK 197


>gi|5802974 peroxiredoxin 3 isoform a precursor [Homo sapiens]
          Length = 256

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 15/196 (7%)

Query: 11  APNFEANTTVGR----IRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNV 66
           AP F+    V      +   DF G  + +LF +P DFT VC TE+   +  A EF   N 
Sbjct: 69  APYFKGTAVVNGEFKDLSLDDFKG-KYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNC 127

Query: 67  KLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKG 126
           +++A+S+DS   HLAW   IN          +   ++ D  ++++   G+L       +G
Sbjct: 128 EVVAVSVDSHFSHLAW---INTPRKNGGLGHMNIALLSDLTKQISRDYGVL------LEG 178

Query: 127 MPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDW-KDGD 185
             +  R +F+  P+  +K   +     GR+ +E LR+V + Q         P +W  D  
Sbjct: 179 SGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSP 238

Query: 186 SVMVLPTIPEEEAKKL 201
           ++   P   +E  +K+
Sbjct: 239 TIKPSPAASKEYFQKV 254


>gi|32483377 peroxiredoxin 3 isoform b [Homo sapiens]
          Length = 238

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 15/196 (7%)

Query: 11  APNFEANTTVGR----IRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNV 66
           AP F+    V      +   DF G  + +LF +P DFT VC TE+   +  A EF   N 
Sbjct: 51  APYFKGTAVVNGEFKDLSLDDFKG-KYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNC 109

Query: 67  KLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKG 126
           +++A+S+DS   HLAW   IN          +   ++ D  ++++   G+L       +G
Sbjct: 110 EVVAVSVDSHFSHLAW---INTPRKNGGLGHMNIALLSDLTKQISRDYGVL------LEG 160

Query: 127 MPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDW-KDGD 185
             +  R +F+  P+  +K   +     GR+ +E LR+V + Q         P +W  D  
Sbjct: 161 SGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTPDSP 220

Query: 186 SVMVLPTIPEEEAKKL 201
           ++   P   +E  +K+
Sbjct: 221 TIKPSPAASKEYFQKV 236


>gi|5453549 peroxiredoxin 4 [Homo sapiens]
          Length = 271

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 14/183 (7%)

Query: 11  APNFEANTTVG----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNV 66
           AP +E    +      ++  D+ G  + + F +P DFT VC TE+        EF   N 
Sbjct: 85  APYWEGTAVIDGEFKELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINT 143

Query: 67  KLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKG 126
           +++A S+DS   HLAW   IN    +     +  P++ D   +++   G+      ++ G
Sbjct: 144 EVVACSVDSQFTHLAW---INTPRRQGGLGPIRIPLLSDLTHQISKDYGVY----LEDSG 196

Query: 127 MPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDS 186
              T R +F+      L+   L     GR+ DE LR+V + Q T +     P  WK G  
Sbjct: 197 H--TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSE 254

Query: 187 VMV 189
            ++
Sbjct: 255 TII 257


>gi|33188454 peroxiredoxin 2 isoform c [Homo sapiens]
          Length = 142

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 3  GGLLLGDVAPNFEANTTVG----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLA 58
          G   +G  AP+F+A   V      ++  D+ G  + +LF +P DFT VC TE+   +  A
Sbjct: 4  GNARIGKPAPDFKATAVVDGAFKEVKLSDYKG-KYVVLFFYPLDFTFVCPTEIIAFSNRA 62

Query: 59 PEFAKRNVKLIALSIDSVEDHLAW 82
           +F K   +++ +S+DS   HLAW
Sbjct: 63 EDFRKLGCEVLGVSVDSQFTHLAW 86


>gi|239757765 PREDICTED: similar to thioredoxin peroxidase [Homo
           sapiens]
          Length = 233

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 38/177 (21%)

Query: 11  APNFEANTTVG----RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNV 66
           AP +E    +      ++  D+ G  + + F +P DFT VC TE+        EF   N 
Sbjct: 85  APYWEGTAVIDGEFKELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINT 143

Query: 67  KLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKG 126
           +++A S+DS   HLAWS              + +  I  + R   +L G+      D+KG
Sbjct: 144 EVVACSVDSQFTHLAWS--------------VSYTYIRRKKRMDLLLKGLF---IIDDKG 186

Query: 127 MPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATP-VDWK 182
           +               L+   L     GR+ DE LR+V + Q T +     P   WK
Sbjct: 187 I---------------LRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEDNPRSSWK 228


>gi|145580586 kintoun isoform 2 [Homo sapiens]
          Length = 789

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 85  DINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFG--PDKK 142
           D+  Y C   +   P P       EL I + +      ++  + VT +++ +    PD +
Sbjct: 264 DLQDYRCSRDSAPSPVP------HELVITIELPLLRSAEQAALEVTRKLLCLDSRKPDYR 317

Query: 143 LKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKK 200
           L+LS+ YP   GR   +  +     QL     V  P   ++  +V V    PEE A +
Sbjct: 318 LRLSLPYPVDDGRGKAQFNKA--RRQLVVTLPVVLPAARRE-PAVAVAAAAPEESADR 372


>gi|145580588 kintoun isoform 1 [Homo sapiens]
          Length = 837

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 85  DINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFG--PDKK 142
           D+  Y C   +   P P       EL I + +      ++  + VT +++ +    PD +
Sbjct: 264 DLQDYRCSRDSAPSPVP------HELVITIELPLLRSAEQAALEVTRKLLCLDSRKPDYR 317

Query: 143 LKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKK 200
           L+LS+ YP   GR   +  +     QL     V  P   ++  +V V    PEE A +
Sbjct: 318 LRLSLPYPVDDGRGKAQFNKA--RRQLVVTLPVVLPAARRE-PAVAVAAAAPEESADR 372


>gi|224282165 zinc finger protein 200 isoform 3 [Homo sapiens]
          Length = 394

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 56  KLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEE------PTEKLPFPIIDDRN-R 108
           KL P+  ++  + ++L + +  + L   +D+N ++C+E      PT++L     DD +  
Sbjct: 91  KLLPKGVQKEQETVSLYLKANPEELVVFEDLNVFHCQEECVSLDPTQQLTSEKEDDSSVG 150

Query: 109 ELAILLGMLDPAEKDEKGMPV 129
           E+ +L+   +P  +D +  PV
Sbjct: 151 EMMLLVNGSNPEGEDPEREPV 171


>gi|224282163 zinc finger protein 200 isoform 3 [Homo sapiens]
          Length = 394

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 56  KLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEE------PTEKLPFPIIDDRN-R 108
           KL P+  ++  + ++L + +  + L   +D+N ++C+E      PT++L     DD +  
Sbjct: 91  KLLPKGVQKEQETVSLYLKANPEELVVFEDLNVFHCQEECVSLDPTQQLTSEKEDDSSVG 150

Query: 109 ELAILLGMLDPAEKDEKGMPV 129
           E+ +L+   +P  +D +  PV
Sbjct: 151 EMMLLVNGSNPEGEDPEREPV 171


>gi|224282161 zinc finger protein 200 isoform 3 [Homo sapiens]
          Length = 394

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 56  KLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEE------PTEKLPFPIIDDRN-R 108
           KL P+  ++  + ++L + +  + L   +D+N ++C+E      PT++L     DD +  
Sbjct: 91  KLLPKGVQKEQETVSLYLKANPEELVVFEDLNVFHCQEECVSLDPTQQLTSEKEDDSSVG 150

Query: 109 ELAILLGMLDPAEKDEKGMPV 129
           E+ +L+   +P  +D +  PV
Sbjct: 151 EMMLLVNGSNPEGEDPEREPV 171


>gi|37675270 zinc finger protein 200 isoform 1 [Homo sapiens]
          Length = 395

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 56  KLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEE------PTEKLPFPIIDDRNRE 109
           KL P+  ++  + ++L + +  + L   +D+N ++C+E      PT++L     DD +  
Sbjct: 91  KLLPKGVQKEQETVSLYLKANPEELVVFEDLNVFHCQEECVSLDPTQQLTSEKEDDSSVG 150

Query: 110 LAILLGM--LDPAEKDEKGMPV 129
             +LL +   +P  +D +  PV
Sbjct: 151 EMMLLAVNGSNPEGEDPEREPV 172


>gi|37675273 zinc finger protein 200 isoform 1 [Homo sapiens]
          Length = 395

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 56  KLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEE------PTEKLPFPIIDDRNRE 109
           KL P+  ++  + ++L + +  + L   +D+N ++C+E      PT++L     DD +  
Sbjct: 91  KLLPKGVQKEQETVSLYLKANPEELVVFEDLNVFHCQEECVSLDPTQQLTSEKEDDSSVG 150

Query: 110 LAILLGM--LDPAEKDEKGMPV 129
             +LL +   +P  +D +  PV
Sbjct: 151 EMMLLAVNGSNPEGEDPEREPV 172


>gi|7019499 peroxisome proliferator-activated receptor gamma,
           coactivator 1 alpha [Homo sapiens]
          Length = 798

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 47  CTTELGRAAKLAPEFAKRNVKLIA---LSIDSVEDHLAWSKD-----INAYNCEEPTEKL 98
           C   +G    L P+  + ++  +    L  DS    L W  D      N YN  EP+   
Sbjct: 19  CAALVGEDQPLCPDLPELDLSELDVNDLDTDSFLGGLKWCSDQSEIISNQYN-NEPSNI- 76

Query: 99  PFPIIDDRNRE--LAILLGMLDPAEKDEKGMP 128
            F  ID+ N    LA+L   LD    DE G+P
Sbjct: 77  -FEKIDEENEANLLAVLTETLDSLPVDEDGLP 107


>gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo
           sapiens]
          Length = 158

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/52 (23%), Positives = 30/52 (57%)

Query: 132 RVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKD 183
           R + +F    KL+L   Y AT+ +   +++R ++ + L  + ++ + ++W+D
Sbjct: 3   RFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRD 54


>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
          Length = 284

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 53  RAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDIN 87
           + A+   EFA+R+V  +  SID +E+ +A +K+ N
Sbjct: 233 KEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEEN 267


>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
          Length = 284

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 53  RAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDIN 87
           + A+   EFA+R+V  +  SID +E+ +A +K+ N
Sbjct: 233 KEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEEN 267


>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
          Length = 284

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 53  RAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDIN 87
           + A+   EFA+R+V  +  SID +E+ +A +K+ N
Sbjct: 233 KEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEEN 267


>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
          Length = 284

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 53  RAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDIN 87
           + A+   EFA+R+V  +  SID +E+ +A +K+ N
Sbjct: 233 KEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEEN 267


>gi|8922528 kelch-like 11 [Homo sapiens]
          Length = 708

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 50  ELGRAAKLAPEFAKRNVK----------LIALSIDSVEDHLAWSKDINAYNCEEPTEKLP 99
           +L R +++ P +  R+VK           + L  D+VE H   +++I +  C+ PT  + 
Sbjct: 290 KLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAENIQSGTCQHPTSHVS 349

Query: 100 FPIIDDRNRELAILLG 115
                 +N ++ +++G
Sbjct: 350 LLPRYGQNMDVIMVIG 365


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.139    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,215,428
Number of Sequences: 37866
Number of extensions: 410610
Number of successful extensions: 701
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 675
Number of HSP's gapped (non-prelim): 25
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.