Guide to the Human Genome
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Search of human proteins with 4758092

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]
         (385 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]                    809   0.0  
gi|133893286 acidic chitinase isoform c [Homo sapiens]                 65   8e-11
gi|42542398 acidic chitinase isoform a [Homo sapiens]                  65   8e-11
gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]                54   2e-07
gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]                54   2e-07
gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]                54   2e-07
gi|4502809 chitotriosidase [Homo sapiens]                              48   1e-05
gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]          46   5e-05
gi|144226251 chitinase 3-like 1 [Homo sapiens]                         45   1e-04
gi|215599992 cyclin D binding myb-like transcription factor 1 is...    32   1.3  
gi|215599981 cyclin D binding myb-like transcription factor 1 is...    32   1.3  
gi|215599967 cyclin D binding myb-like transcription factor 1 is...    32   1.3  
gi|15431316 keratin, hair, basic, 4 [Homo sapiens]                     31   1.6  
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens]    31   1.6  
gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens]    31   1.6  
gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens]    31   1.6  
gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens]    31   1.6  
gi|55956899 keratin 9 [Homo sapiens]                                   31   2.1  
gi|119709832 low density lipoprotein receptor-related protein 5 ...    30   3.7  
gi|206597470 neural precursor cell expressed, developmentally do...    29   6.3  
gi|206597468 neural precursor cell expressed, developmentally do...    29   6.3  
gi|23097254 neural precursor cell expressed, developmentally dow...    29   6.3  
gi|206597465 neural precursor cell expressed, developmentally do...    29   6.3  

>gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]
          Length = 385

 Score =  809 bits (2089), Expect = 0.0
 Identities = 385/385 (100%), Positives = 385/385 (100%)

Query: 1   MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEV 60
           MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEV
Sbjct: 1   MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEV 60

Query: 61  FVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRA 120
           FVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRA
Sbjct: 61  FVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRA 120

Query: 121 SWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDV 180
           SWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDV
Sbjct: 121 SWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDV 180

Query: 181 AWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKM 240
           AWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKM
Sbjct: 181 AWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKM 240

Query: 241 SINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINS 300
           SINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINS
Sbjct: 241 SINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINS 300

Query: 301 SISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLD 360
           SISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLD
Sbjct: 301 SISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLD 360

Query: 361 YSGDAVAKQQTEEMWEVLKPKLLQR 385
           YSGDAVAKQQTEEMWEVLKPKLLQR
Sbjct: 361 YSGDAVAKQQTEEMWEVLKPKLLQR 385


>gi|133893286 acidic chitinase isoform c [Homo sapiens]
          Length = 476

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 33/269 (12%)

Query: 116 PAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDA--LTALVKETTDSFHREIEG 173
           P  R ++I   +   +    DG++ D E   +  SP  D    T LV+E  ++F +E + 
Sbjct: 113 PENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQ 172

Query: 174 SQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYN 228
                  VT  VA    NI    Y    ++   D++ VM+YD     W E     N+P  
Sbjct: 173 INKPRLMVTAAVAAGISNIQSG-YEIPQLSQYLDYIHVMTYDLHGS-W-EGYTGENSPLY 229

Query: 229 Q--TLTGYNDYIKMSI----------NPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPF 276
           +  T TG N Y+ +              +KL++G P YG+++   N S   +        
Sbjct: 230 KYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAG 289

Query: 277 RGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVW--YDNPQ 334
              P +  +G    Y+      N +  G  WD  Q  PY        +   VW  YDN +
Sbjct: 290 PAGPYAKESGIWAYYEICTFLKNGATQG--WDAPQEVPY-------AYQGNVWVGYDNIK 340

Query: 335 SISLKATYIQNYRLRGIGMWNANCLDYSG 363
           S  +KA ++++ +  G  +W  +  D++G
Sbjct: 341 SFDIKAQWLKHNKFGGAMVWAIDLDDFTG 369


>gi|42542398 acidic chitinase isoform a [Homo sapiens]
          Length = 368

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 33/269 (12%)

Query: 116 PAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDA--LTALVKETTDSFHREIEG 173
           P  R ++I   +   +    DG++ D E   +  SP  D    T LV+E  ++F +E + 
Sbjct: 5   PENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQ 64

Query: 174 SQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYN 228
                  VT  VA    NI    Y    ++   D++ VM+YD     W E     N+P  
Sbjct: 65  INKPRLMVTAAVAAGISNIQSG-YEIPQLSQYLDYIHVMTYDLHGS-W-EGYTGENSPLY 121

Query: 229 Q--TLTGYNDYIKMSI----------NPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPF 276
           +  T TG N Y+ +              +KL++G P YG+++   N S   +        
Sbjct: 122 KYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAG 181

Query: 277 RGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVW--YDNPQ 334
              P +  +G    Y+      N +  G  WD  Q  PY        +   VW  YDN +
Sbjct: 182 PAGPYAKESGIWAYYEICTFLKNGATQG--WDAPQEVPY-------AYQGNVWVGYDNIK 232

Query: 335 SISLKATYIQNYRLRGIGMWNANCLDYSG 363
           S  +KA ++++ +  G  +W  +  D++G
Sbjct: 233 SFDIKAQWLKHNKFGGAMVWAIDLDDFTG 261


>gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]
          Length = 311

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 31/226 (13%)

Query: 157 TALVKETTDSFHREIEGSQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDE 211
           T L+ E  ++F ++   S      +T  V+   + ID   Y    +A   DF+ ++S+D 
Sbjct: 77  TVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNS-YQVEKLAKDLDFINLLSFDF 135

Query: 212 QSQIWSECIAAANAP-------------YN-QTLTGYNDYIKMSINPKKLVMGVPWYGYD 257
                   I   N+P             YN +   GY  +I   +  +K+VMG+P YG+ 
Sbjct: 136 HGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGY--WIHKGMPSEKVVMGIPTYGHS 193

Query: 258 YTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYN 317
           +T L  +E  V   A  P    P ++++G    Y+       + I+     +DQ+ PY  
Sbjct: 194 FT-LASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRL---QDQQVPYAV 249

Query: 318 YKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSG 363
             +       V YD+ +S+  K  +++N  L G  +W+ +  D++G
Sbjct: 250 KGN-----QWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTG 290


>gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]
          Length = 380

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 31/226 (13%)

Query: 157 TALVKETTDSFHREIEGSQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDE 211
           T L+ E  ++F ++   S      +T  V+   + ID   Y    +A   DF+ ++S+D 
Sbjct: 146 TVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNS-YQVEKLAKDLDFINLLSFDF 204

Query: 212 QSQIWSECIAAANAP-------------YN-QTLTGYNDYIKMSINPKKLVMGVPWYGYD 257
                   I   N+P             YN +   GY  +I   +  +K+VMG+P YG+ 
Sbjct: 205 HGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGY--WIHKGMPSEKVVMGIPTYGHS 262

Query: 258 YTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYN 317
           +T L  +E  V   A  P    P ++++G    Y+       + I+     +DQ+ PY  
Sbjct: 263 FT-LASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRL---QDQQVPYAV 318

Query: 318 YKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSG 363
             +       V YD+ +S+  K  +++N  L G  +W+ +  D++G
Sbjct: 319 KGN-----QWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTG 359


>gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]
          Length = 390

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 31/226 (13%)

Query: 157 TALVKETTDSFHREIEGSQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDE 211
           T L+ E  ++F ++   S      +T  V+   + ID   Y    +A   DF+ ++S+D 
Sbjct: 156 TVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNS-YQVEKLAKDLDFINLLSFDF 214

Query: 212 QSQIWSECIAAANAP-------------YN-QTLTGYNDYIKMSINPKKLVMGVPWYGYD 257
                   I   N+P             YN +   GY  +I   +  +K+VMG+P YG+ 
Sbjct: 215 HGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGY--WIHKGMPSEKVVMGIPTYGHS 272

Query: 258 YTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYN 317
           +T L  +E  V   A  P    P ++++G    Y+       + I+     +DQ+ PY  
Sbjct: 273 FT-LASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRL---QDQQVPYAV 328

Query: 318 YKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSG 363
             +       V YD+ +S+  K  +++N  L G  +W+ +  D++G
Sbjct: 329 KGN-----QWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTG 369


>gi|4502809 chitotriosidase [Homo sapiens]
          Length = 466

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 35/266 (13%)

Query: 119 RASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDA--LTALVKETTDSFHREIEGSQ- 175
           R +++   +   +    DG+++D E   +  SP  D    T LV++  ++F +E + S  
Sbjct: 116 RQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGK 175

Query: 176 ----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPY--NQ 229
               ++  V      +D   Y    IA   DF+ +M+YD     W E +   N+P    Q
Sbjct: 176 ERLLLSAAVPAGQTYVDAG-YEVDKIAQNLDFVNLMAYDFHGS-W-EKVTGHNSPLYKRQ 232

Query: 230 TLTG----------YNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGA 279
             +G             +++      KL++G+P YG  +T  + S+  V   A       
Sbjct: 233 EESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPG 292

Query: 280 PCSDAAGRQVPYKTIMKQINSSISGNLWDK--DQRAPYYNYKDPAGHFHQVWYDNPQSIS 337
           P +   G    Y+        S  G    +  DQ+ PY  ++D       V +D+ +S  
Sbjct: 293 PFTKEGGMLAYYEV------CSWKGATKQRIQDQKVPYI-FRDN----QWVGFDDVESFK 341

Query: 338 LKATYIQNYRLRGIGMWNANCLDYSG 363
            K +Y++   L G  +W  +  D++G
Sbjct: 342 TKVSYLKQKGLGGAMVWALDLDDFAG 367


>gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]
          Length = 678

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 29/263 (11%)

Query: 117 AFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTAL--VKETTDSFHREIEGS 174
           A R  +IA  ++L +T   DG+++         SP +D  T L  ++E   +F +E   +
Sbjct: 115 ANREKFIASVISLLRTHDFDGLDLFFLYPGLRGSPMHDRWTFLFLIEELLFAFRKEALLT 174

Query: 175 Q-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPY-- 227
                 ++  V+  P +I +  Y+   +    DF+ V+SYD     W E     N+P   
Sbjct: 175 MRPRLLLSAAVSGVP-HIVQTSYDVRFLGRLLDFINVLSYDLHGS-W-ERFTGHNSPLFS 231

Query: 228 -----NQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCS 282
                  +    N + K+    +KL+MG+P YG  +  L  S++ +   A  P      +
Sbjct: 232 LPEDPKSSAYAMNYWRKLGAPSEKLIMGIPTYGRTFRLLKASKNGLQARAIGPASPGKYT 291

Query: 283 DAAGRQVPYKTIMKQINSSISG--NLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKA 340
              G    +     +I S + G    W   Q  PY N          V YDN  S S KA
Sbjct: 292 KQEGFLAYF-----EICSFVWGAKKHWIDYQYVPYANKGK-----EWVGYDNAISFSYKA 341

Query: 341 TYIQNYRLRGIGMWNANCLDYSG 363
            +I+     G  +W  +  D  G
Sbjct: 342 WFIRREHFGGAMVWTLDMDDVRG 364


>gi|144226251 chitinase 3-like 1 [Homo sapiens]
          Length = 383

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 55/241 (22%), Positives = 87/241 (36%), Gaps = 64/241 (26%)

Query: 157 TALVKETTDSFHREIEGS--QVTFDVAWSPKNID-RRCYNYTGIADACDFLFVMSYD--- 210
           T L+KE    F +E +    Q+    A S   +     Y+   I+   DF+ +M+YD   
Sbjct: 151 TTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHG 210

Query: 211 -------EQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNL 263
                    S ++     A+   ++ T       +++     KLVMG+P +G  +T L  
Sbjct: 211 AWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFT-LAS 269

Query: 264 SEDHVCTIAKVP---------------------FRGAPCSDAAGRQVPYKTIMKQINSSI 302
           SE  V      P                      RGA      G+QVPY T         
Sbjct: 270 SETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYAT--------- 320

Query: 303 SGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYS 362
            GN W                    V YD+ +S+  K  Y+++ +L G  +W  +  D+ 
Sbjct: 321 KGNQW--------------------VGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQ 360

Query: 363 G 363
           G
Sbjct: 361 G 361


>gi|215599992 cyclin D binding myb-like transcription factor 1
           isoform a [Homo sapiens]
          Length = 760

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 126 KLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPK 185
           ++ + + + +D I+    +EV+ +S  +          T+  H+  +G        WS +
Sbjct: 107 QIQILQNEQLDEISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGM-------WSKE 159

Query: 186 NID------RRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAP----YNQTLTGYN 235
            ID       R     GI DA + +F MS DE+   +       N P    Y + L  Y+
Sbjct: 160 EIDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYD 219

Query: 236 D 236
           D
Sbjct: 220 D 220


>gi|215599981 cyclin D binding myb-like transcription factor 1
           isoform b [Homo sapiens]
          Length = 672

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 126 KLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPK 185
           ++ + + + +D I+    +EV+ +S  +          T+  H+  +G        WS +
Sbjct: 19  QIQILQNEQLDEISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGM-------WSKE 71

Query: 186 NID------RRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAP----YNQTLTGYN 235
            ID       R     GI DA + +F MS DE+   +       N P    Y + L  Y+
Sbjct: 72  EIDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYD 131

Query: 236 D 236
           D
Sbjct: 132 D 132


>gi|215599967 cyclin D binding myb-like transcription factor 1
           isoform a [Homo sapiens]
          Length = 760

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 126 KLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPK 185
           ++ + + + +D I+    +EV+ +S  +          T+  H+  +G        WS +
Sbjct: 107 QIQILQNEQLDEISPLGNEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGM-------WSKE 159

Query: 186 NID------RRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAP----YNQTLTGYN 235
            ID       R     GI DA + +F MS DE+   +       N P    Y + L  Y+
Sbjct: 160 EIDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMYD 219

Query: 236 D 236
           D
Sbjct: 220 D 220


>gi|15431316 keratin, hair, basic, 4 [Homo sapiens]
          Length = 600

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 86  KYDSELMCYAHSKGARVVLKGDV--SLKDIIDPAFRASWIAQKLNLAKTQYMDGINI 140
           KY+ E++C A+++   V LK DV  +  +  D       + Q+++  KT YM+ I +
Sbjct: 252 KYEEEVVCRANAENEFVALKKDVDAAFMNKSDLEANVDTLTQEIDFLKTLYMEEIQL 308


>gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens]
          Length = 418

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 32/242 (13%)

Query: 127 LNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKN 186
           + +AK Q+ DG  +++  ++  LS +   L  ++    ++ H+    + +    A +P  
Sbjct: 203 VQVAKNQHFDGFVVEVWNQL--LSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGT 260

Query: 187 IDRRCYN---YTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSIN 243
                +    +  +A   D   +M+YD  +          NAP +            S  
Sbjct: 261 DQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQP----GPNAPLSWVRACVQVLDPKSKW 316

Query: 244 PKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSIS 303
             K+++G+ +YG DY     S+D     A+ P  GA           Y   +K     + 
Sbjct: 317 RSKILLGLNFYGMDYAT---SKD-----AREPVVGAR----------YIQTLKDHRPRM- 357

Query: 304 GNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWN-ANCLDYS 362
             +WD      ++ YK      H V+Y   +S+ ++    +   + G+ +W     LDY 
Sbjct: 358 --VWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYF 414

Query: 363 GD 364
            D
Sbjct: 415 YD 416


>gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 32/242 (13%)

Query: 127 LNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKN 186
           + +AK Q+ DG  +++  ++  LS +   L  ++    ++ H+    + +    A +P  
Sbjct: 178 VQVAKNQHFDGFVVEVWNQL--LSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGT 235

Query: 187 IDRRCYN---YTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSIN 243
                +    +  +A   D   +M+YD  +          NAP +            S  
Sbjct: 236 DQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQP----GPNAPLSWVRACVQVLDPKSKW 291

Query: 244 PKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSIS 303
             K+++G+ +YG DY     S+D     A+ P  GA           Y   +K     + 
Sbjct: 292 RSKILLGLNFYGMDYAT---SKD-----AREPVVGAR----------YIQTLKDHRPRM- 332

Query: 304 GNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWN-ANCLDYS 362
             +WD      ++ YK      H V+Y   +S+ ++    +   + G+ +W     LDY 
Sbjct: 333 --VWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYF 389

Query: 363 GD 364
            D
Sbjct: 390 YD 391


>gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 32/242 (13%)

Query: 127 LNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKN 186
           + +AK Q+ DG  +++  ++  LS +   L  ++    ++ H+    + +    A +P  
Sbjct: 178 VQVAKNQHFDGFVVEVWNQL--LSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGT 235

Query: 187 IDRRCYN---YTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSIN 243
                +    +  +A   D   +M+YD  +          NAP +            S  
Sbjct: 236 DQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQP----GPNAPLSWVRACVQVLDPKSKW 291

Query: 244 PKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSIS 303
             K+++G+ +YG DY     S+D     A+ P  GA           Y   +K     + 
Sbjct: 292 RSKILLGLNFYGMDYAT---SKD-----AREPVVGAR----------YIQTLKDHRPRM- 332

Query: 304 GNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWN-ANCLDYS 362
             +WD      ++ YK      H V+Y   +S+ ++    +   + G+ +W     LDY 
Sbjct: 333 --VWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYF 389

Query: 363 GD 364
            D
Sbjct: 390 YD 391


>gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens]
          Length = 393

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 32/242 (13%)

Query: 127 LNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKN 186
           + +AK Q+ DG  +++  ++  LS +   L  ++    ++ H+    + +    A +P  
Sbjct: 178 VQVAKNQHFDGFVVEVWNQL--LSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPGT 235

Query: 187 IDRRCYN---YTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSIN 243
                +    +  +A   D   +M+YD  +          NAP +            S  
Sbjct: 236 DQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQP----GPNAPLSWVRACVQVLDPKSKW 291

Query: 244 PKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSIS 303
             K+++G+ +YG DY     S+D     A+ P  GA           Y   +K     + 
Sbjct: 292 RSKILLGLNFYGMDYAT---SKD-----AREPVVGAR----------YIQTLKDHRPRM- 332

Query: 304 GNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWN-ANCLDYS 362
             +WD      ++ YK      H V+Y   +S+ ++    +   + G+ +W     LDY 
Sbjct: 333 --VWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYF 389

Query: 363 GD 364
            D
Sbjct: 390 YD 391


>gi|55956899 keratin 9 [Homo sapiens]
          Length = 623

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 141 DIEQEVNCLSPEYDALTAL---VKETTDSFHREIEGSQVTFDVAWSPK 185
           D+ QE+ C + EY  L ++   +++  +++H  +EG Q  F+ + + K
Sbjct: 425 DVRQEIECQNQEYSLLLSIKMRLEKEIETYHNLLEGGQEDFESSGAGK 472


>gi|119709832 low density lipoprotein receptor-related protein 5
           [Homo sapiens]
          Length = 1615

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 22/115 (19%)

Query: 12  VSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPD-FEVFVFDVGQKTW 70
           + + P G P   LL LL LLAL       C CP P    P+    +  +V + D G    
Sbjct: 1   MEAAPPGPPWPLLLLLLLLLAL-------CGCPAPAAASPLLLFANRRDVRLVDAGGVKL 53

Query: 71  KSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQ 125
           +S       T+   G  D+  + +  SKGA       V   D+ + A + +++ Q
Sbjct: 54  ES-------TIVVSGLEDAAAVDFQFSKGA-------VYWTDVSEEAIKQTYLNQ 94


>gi|206597470 neural precursor cell expressed, developmentally
           down-regulated 1 isoform c [Homo sapiens]
          Length = 571

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 282 SDAAGRQVPYKTIMKQINSSISGN----LWDKDQRAPYYNY 318
           S+ + R + Y    K +  S+S N    LWD + ++PY+N+
Sbjct: 72  SNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNF 112


>gi|206597468 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 282 SDAAGRQVPYKTIMKQINSSISGN----LWDKDQRAPYYNY 318
           S+ + R + Y    K +  S+S N    LWD + ++PY+N+
Sbjct: 161 SNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNF 201


>gi|23097254 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 282 SDAAGRQVPYKTIMKQINSSISGN----LWDKDQRAPYYNY 318
           S+ + R + Y    K +  S+S N    LWD + ++PY+N+
Sbjct: 161 SNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNF 201


>gi|206597465 neural precursor cell expressed, developmentally
           down-regulated 1 isoform a [Homo sapiens]
          Length = 667

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 282 SDAAGRQVPYKTIMKQINSSISGN----LWDKDQRAPYYNY 318
           S+ + R + Y    K +  S+S N    LWD + ++PY+N+
Sbjct: 168 SNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNF 208


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,552,374
Number of Sequences: 37866
Number of extensions: 676568
Number of successful extensions: 1576
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1560
Number of HSP's gapped (non-prelim): 27
length of query: 385
length of database: 18,247,518
effective HSP length: 104
effective length of query: 281
effective length of database: 14,309,454
effective search space: 4020956574
effective search space used: 4020956574
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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