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Search of human proteins with 4757842
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757842 BCL2-like 2 protein [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757842 BCL2-like 2 protein [Homo sapiens] 392 e-109
gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens] 158 3e-39
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens] 153 1e-37
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens] 130 7e-31
gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens] 64 8e-11
gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo ... 64 1e-10
gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens] 59 3e-09
gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens] 57 7e-09
gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens] 56 2e-08
gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens] 56 2e-08
gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens] 55 4e-08
gi|14210524 BCL2-related ovarian killer [Homo sapiens] 55 5e-08
gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens] 47 1e-05
gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens] 46 2e-05
gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo sap... 42 3e-04
gi|9966783 BCL2-like 10 (apoptosis facilitator) [Homo sapiens] 41 6e-04
gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens] 33 0.20
gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens] 33 0.20
gi|45243501 BCL2-like 13 (apoptosis facilitator) [Homo sapiens] 32 0.26
gi|19923855 SYAP1 protein [Homo sapiens] 28 3.7
gi|30578416 ring finger protein 113B [Homo sapiens] 28 4.8
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens] 28 6.3
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 28 6.3
gi|24308181 kelch-like 9 [Homo sapiens] 27 8.3
>gi|4757842 BCL2-like 2 protein [Homo sapiens]
Length = 193
Score = 392 bits (1007), Expect = e-109
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRT 60
MATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRT
Sbjct: 1 MATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRT 60
Query: 61 FSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVG 120
FSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVG
Sbjct: 61 FSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVG 120
Query: 121 QVQEWMVAYLETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLTGAVAL 180
QVQEWMVAYLETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLTGAVAL
Sbjct: 121 QVQEWMVAYLETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLTGAVAL 180
Query: 181 GALVTVGAFFASK 193
GALVTVGAFFASK
Sbjct: 181 GALVTVGAFFASK 193
>gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens]
Length = 233
Score = 158 bits (399), Expect = 3e-39
Identities = 91/224 (40%), Positives = 114/224 (50%), Gaps = 51/224 (22%)
Query: 11 RALVADFVGYKLRQKGY---------------------------VCGAGP----GEGPAA 39
R LV DF+ YKL QKGY P + PA
Sbjct: 6 RELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAV 65
Query: 40 D------------------PLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQ 81
+ + QA+R AGDEFE R+RR FSDL +QLH+TPG+A Q F Q
Sbjct: 66 NGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQ 125
Query: 82 VSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSS 141
V +ELF+ G NWGR+VAFF FG ALC ESV+KEM+ LV ++ WM YL L WI +
Sbjct: 126 VVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQEN 185
Query: 142 GGWAEFTALYGDGALEEARRLRE--GNWASVRTVLTGAVALGAL 183
GGW F LYG+ A E+R+ +E W + G V LG+L
Sbjct: 186 GGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSL 229
>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
Length = 239
Score = 153 bits (386), Expect = 1e-37
Identities = 74/163 (45%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 31 AGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGG 90
AGP P +H +R AGD+F R+RR F+++++QLH+TP +A+ RF V +ELF+ G
Sbjct: 82 AGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141
Query: 91 PNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSSGGWAEFTAL 150
NWGR+VAFF FG +C ESVN+EM PLV + WM YL L WI +GGW F L
Sbjct: 142 VNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVEL 201
Query: 151 YGDGALEEARRLREGNWASVRTVLTGAVALGALVTVGAFFASK 193
YG R L + +W S++T+L+ A+ +GA +T+GA+ K
Sbjct: 202 YG----PSMRPLFDFSWLSLKTLLSLAL-VGACITLGAYLGHK 239
>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
Length = 205
Score = 130 bits (327), Expect = 7e-31
Identities = 57/114 (50%), Positives = 76/114 (66%)
Query: 31 AGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGG 90
AGP P +H +R AGD+F R+RR F+++++QLH+TP +A+ RF V +ELF+ G
Sbjct: 82 AGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141
Query: 91 PNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSSGGW 144
NWGR+VAFF FG +C ESVN+EM PLV + WM YL L WI +GGW
Sbjct: 142 VNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGW 195
>gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens]
Length = 211
Score = 63.9 bits (154), Expect = 8e-11
Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 7 APDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLH-----------QAMRAAGDEFET 55
A DT + +V Y+ +Q+ G P L + + GD+
Sbjct: 28 AQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINR 87
Query: 56 RFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEM 115
R+ F + L T +A + FT+++ LF+ G NWGR+VA FG L +
Sbjct: 88 RYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGL 147
Query: 116 EPLVGQVQEWMVAY-LETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVL 174
+GQV ++V + L +A WI GGW A L G +V VL
Sbjct: 148 TGFLGQVTRFVVDFMLHHCIARWIAQRGGWV------------AALNLGNGPILNVLVVL 195
Query: 175 TGAVALGALVTVGAFFAS 192
G V LG V V FF S
Sbjct: 196 -GVVLLGQFV-VRRFFKS 211
>gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo
sapiens]
Length = 211
Score = 63.5 bits (153), Expect = 1e-10
Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 7 APDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLH-----------QAMRAAGDEFET 55
A DT + +V Y +Q+ GA P L + + GD+
Sbjct: 28 AQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINR 87
Query: 56 RFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEM 115
R+ F + L T +A + FT+++ LF+ G NWGR+VA F L + +
Sbjct: 88 RYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGINWGRVVALLGFSYRLALHIYQRGL 147
Query: 116 EPLVGQVQEWMVAY-LETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVL 174
+GQV ++V + L +A WI GGW A L G +V VL
Sbjct: 148 TGFLGQVTRFVVDFMLHHCIARWIAQRGGWV------------AALNLGNGPILNVLVVL 195
Query: 175 TGAVALGALVTVGAFFAS 192
G V LG V V FF S
Sbjct: 196 -GVVLLGQFV-VRRFFKS 211
>gi|4502381 BCL2-like 1 isoform 2 [Homo sapiens]
Length = 170
Score = 58.9 bits (141), Expect = 3e-09
Identities = 41/120 (34%), Positives = 50/120 (41%), Gaps = 49/120 (40%)
Query: 11 RALVADFVGYKLRQKGY---------------------------VCGAGP----GEGPAA 39
R LV DF+ YKL QKGY P + PA
Sbjct: 6 RELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAV 65
Query: 40 D------------------PLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQ 81
+ + QA+R AGDEFE R+RR FSDL +QLH+TPG+A Q F Q
Sbjct: 66 NGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQ 125
>gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens]
Length = 192
Score = 57.4 bits (137), Expect = 7e-09
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 34 GEGP--AADP---------LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQV 82
GE P A DP L + ++ GDE ++ A V S ++ F +V
Sbjct: 40 GEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRMIAA----VDTDSPREVFFRV 95
Query: 83 SDELFQGGP-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSS 141
+ ++F G NWGR+VA F F + L +++ ++ L+ + W + +L RL WI
Sbjct: 96 AADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQ 155
Query: 142 GGWAEFTALYG 152
GGW + +G
Sbjct: 156 GGWDGLLSYFG 166
>gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]
Length = 218
Score = 55.8 bits (133), Expect = 2e-08
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 34 GEGP--AADP---------LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQV 82
GE P A DP L + ++ GDE ++ A V S ++ F +V
Sbjct: 40 GEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRMIAA----VDTDSPREVFFRV 95
Query: 83 SDELFQGGP-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSS 141
+ ++F G NWGR+VA F F + L +++ ++ L+ + W + +L RL WI
Sbjct: 96 AADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQ 155
Query: 142 GGW 144
GGW
Sbjct: 156 GGW 158
>gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens]
Length = 179
Score = 55.8 bits (133), Expect = 2e-08
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 34 GEGP--AADP---------LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQV 82
GE P A DP L + ++ GDE ++ A V S ++ F +V
Sbjct: 40 GEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRMIAA----VDTDSPREVFFRV 95
Query: 83 SDELFQGGP-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSS 141
+ ++F G NWGR+VA F F + L +++ ++ L+ + W + +L RL WI
Sbjct: 96 AADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQ 155
Query: 142 GGW 144
GGW
Sbjct: 156 GGW 158
>gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens]
Length = 143
Score = 55.1 bits (131), Expect = 4e-08
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 70 VTPGSAQQRFTQVSDELFQGGP-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVA 128
V S ++ F +V+ ++F G NWGR+VA F F + L +++ ++ L+ + W +
Sbjct: 34 VDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLD 93
Query: 129 YLETRLADWIHSSGGWAEFTALYG 152
+L RL WI GGW + +G
Sbjct: 94 FLRERLLGWIQDQGGWDGLLSYFG 117
>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
Length = 212
Score = 54.7 bits (130), Expect = 5e-08
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 11 RALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQA---MRAAGDEFETRFRRTFSDLAAQ 67
+AL ++V +L + G A P L + + GDE E + ++A Q
Sbjct: 32 KALGREYVHARLLRAGLSWSAPERAAPVPGRLAEVCAVLLRLGDELEMIRPSVYRNVARQ 91
Query: 68 LHVTPGS---AQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQE 124
LH++ S F V+ +F G WG++V+ + A L + V + +V + +
Sbjct: 92 LHISLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHALVD 151
Query: 125 WMVAYLETRLADWIHSSGGWAE 146
+ ++ LA W+ GGW +
Sbjct: 152 CLGEFVRKTLATWLRRRGGWTD 173
>gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens]
Length = 163
Score = 47.0 bits (110), Expect = 1e-05
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 33 PGEGPAADP--LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGG 90
PG GP+ L + E E + ++ V+ +A+ F QV ++ F+ G
Sbjct: 26 PGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNV---VSVDTARTLFNQVMEKEFEDG 82
Query: 91 P-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQE---WMVAYLETRLADWIHSSGGWAE 146
NWGR+V F F L + + +++ P V +E ++ ++ +WI +GGW +
Sbjct: 83 IINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWGK 142
Query: 147 F 147
+
Sbjct: 143 W 143
>gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens]
Length = 175
Score = 46.2 bits (108), Expect = 2e-05
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 33 PGEGPAADP--LHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGG 90
PG GP+ L + E E + ++ V+ +A+ F QV ++ F+ G
Sbjct: 26 PGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNV---VSVDTARTLFNQVMEKEFEDG 82
Query: 91 P-NWGRLVAFFVFGAALCAESVNKEMEPLVGQVQE---WMVAYLETRLADWIHSSGGW 144
NWGR+V F F L + + +++ P V +E ++ ++ +WI +GGW
Sbjct: 83 IINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGW 140
>gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo
sapiens]
Length = 350
Score = 42.0 bits (97), Expect = 3e-04
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 44 QAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGG-PNWGRLVAFFVF 102
+ +R GD + F + +L + + ++V +F G NWGR+V F
Sbjct: 211 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISF 270
Query: 103 GAALCAESVNKEMEPLVGQVQEWMVAYLETRLADWIHSSGGWAEFTALYGDGALEEARRL 162
GA + E + + E + L DW+ GW F + L
Sbjct: 271 GAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDL------ 324
Query: 163 REGNWASVRTVLTGAVALGA 182
EG +V G +GA
Sbjct: 325 -EGGIRNVLLAFAGVAGVGA 343
>gi|9966783 BCL2-like 10 (apoptosis facilitator) [Homo sapiens]
Length = 204
Score = 41.2 bits (95), Expect = 6e-04
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 30/158 (18%)
Query: 10 TRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLH 69
T L+AD++GY R+ G P P+ P +R+A R FS
Sbjct: 19 TELLLADYLGYCAREPGT-----PEPAPST-PEAAVLRSAAARLRQIHRSFFSAYLGY-- 70
Query: 70 VTPGSAQQRFTQVSDELFQG--GPNWGRLVAFFVFGAALCA--------------ESVNK 113
PG+ + ++D + GP WGR+V F L + K
Sbjct: 71 --PGNRFELVALMADSVLSDSPGPTWGRVVTLVTFAGTLLERGPLVTARWKKWGFQPRLK 128
Query: 114 EMEPLVGQVQEWMVAYLETRLAD----WIHSSGGWAEF 147
E E V + + +VA L +RL W+ + GGW F
Sbjct: 129 EQEGDVARDCQRLVALLSSRLMGQHRAWLQAQGGWDGF 166
>gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 32.7 bits (73), Expect = 0.20
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 44 QAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQG-GPNWGRLVAFFVF 102
+ ++ +GD+ E + ++ D A H G + F ++D++ G P V F
Sbjct: 214 ELLKYSGDQLERKLKK---DKALMGHFQDGLSYSVFKTITDQVLMGVDPRGESEVKAQGF 270
Query: 103 GAALCAESVNK----EMEPLVGQVQEWMVAYLETRLADWIHSSGGWAEFTAL 150
AAL + K + P+ +V + YL+ + WI GGW + +
Sbjct: 271 KAALVIDVTAKLTAIDNHPM-NRVLGFGTKYLKENFSPWIQQHGGWEKILGI 321
>gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 32.7 bits (73), Expect = 0.20
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 44 QAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQG-GPNWGRLVAFFVF 102
+ ++ +GD+ E + ++ D A H G + F ++D++ G P V F
Sbjct: 214 ELLKYSGDQLERKLKK---DKALMGHFQDGLSYSVFKTITDQVLMGVDPRGESEVKAQGF 270
Query: 103 GAALCAESVNK----EMEPLVGQVQEWMVAYLETRLADWIHSSGGWAEFTAL 150
AAL + K + P+ +V + YL+ + WI GGW + +
Sbjct: 271 KAALVIDVTAKLTAIDNHPM-NRVLGFGTKYLKENFSPWIQQHGGWEKILGI 321
>gi|45243501 BCL2-like 13 (apoptosis facilitator) [Homo sapiens]
Length = 485
Score = 32.3 bits (72), Expect = 0.26
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 65 AAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQE 124
A Q+ ++ Q F + + E W +++ V + E + EPL +Q
Sbjct: 122 ALQMLLSQPVTYQAFRECTLETTVHASGWNKILVPLVLLRQMLLELTRRGQEPLSALLQ- 180
Query: 125 WMVAYLETRLADWIHSSGGWAEFTAL 150
+ V YLE A++I GGW +L
Sbjct: 181 FGVTYLEDYSAEYIIQQGGWGTVFSL 206
>gi|19923855 SYAP1 protein [Homo sapiens]
Length = 352
Score = 28.5 bits (62), Expect = 3.7
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 47 RAAGDEFETRFRRTFSDLAAQLHV-TPGSA--QQRFTQVSDELFQGGPNWGRLVAFFVFG 103
+AAG E ++ R LA + TP Q TQ +E P V+
Sbjct: 223 QAAGKEEKSNGREQDLPLAEAVRPKTPPVVIKSQLKTQEDEEEISTSPGVSEFVSDAFDA 282
Query: 104 AALCAESVNKEMEPLVGQVQEWMVAYLETRLADW 137
L E + KEME LV ++ A LE ADW
Sbjct: 283 CNLNQEDLRKEMEQLVLDKKQEETAVLEEDSADW 316
>gi|30578416 ring finger protein 113B [Homo sapiens]
Length = 322
Score = 28.1 bits (61), Expect = 4.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 1 MATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFET 55
MA P S T + ++ G AG + PA DP H ++GDE +T
Sbjct: 1 MAAPPSPGRTADQADQVCTFLFKKPGRKGAAGLRKRPACDPEHGESSSSGDEGDT 55
>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
Length = 196
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 7 APDTRALVADFVGYKLRQKGYVCGAGPGEGPAA 39
APD RA AD K ++G G GEGPAA
Sbjct: 40 APDWRARRADLTRRKGLRRGEPGSRGLGEGPAA 72
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 27.7 bits (60), Expect = 6.3
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 19 GYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGD---EFETRFRRTFSDLAAQLHVTPGSA 75
GYKL+ ++ G G GEG + + A D E+ R TFS L PG A
Sbjct: 343 GYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQS---DPGLA 399
Query: 76 QQRFTQVSDELFQGGPNW 93
+ Q E F PNW
Sbjct: 400 K---PQHVTETFHPDPNW 414
>gi|24308181 kelch-like 9 [Homo sapiens]
Length = 617
Score = 27.3 bits (59), Expect = 8.3
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 21 KLRQKGYVCGAG--PGEGPAADPLHQAMRA-AGDEFETRF 57
+LR +G +C PG+G P+H+AM A A D F+ F
Sbjct: 42 QLRIEGLLCDVTLVPGDGDEIFPVHRAMMASASDYFKAMF 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,549,766
Number of Sequences: 37866
Number of extensions: 316258
Number of successful extensions: 834
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 809
Number of HSP's gapped (non-prelim): 28
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.