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Search of human proteins with 47086459
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47086459 prostate and testis expressed 2 [Homo sapiens]
(113 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47086459 prostate and testis expressed 2 [Homo sapiens] 249 4e-67
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 37 0.003
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 37 0.003
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 37 0.003
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 37 0.003
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 37 0.003
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 37 0.003
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 37 0.003
gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo... 30 0.32
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo... 30 0.32
gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo sap... 30 0.41
gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo sap... 28 1.6
gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo sap... 28 1.6
gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo sap... 28 1.6
gi|239757212 PREDICTED: similar to hCG1773661 [Homo sapiens] 26 6.0
gi|239751718 PREDICTED: similar to hCG1773661 [Homo sapiens] 26 6.0
gi|239746221 PREDICTED: hypothetical protein XP_002343677 [Homo ... 26 6.0
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 26 6.0
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 26 6.0
gi|122937512 myosin VIIB [Homo sapiens] 26 6.0
>gi|47086459 prostate and testis expressed 2 [Homo sapiens]
Length = 113
Score = 249 bits (635), Expect = 4e-67
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MLVLFLLGTVFLLCPYWGELHDPIKATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVE 60
MLVLFLLGTVFLLCPYWGELHDPIKATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVE
Sbjct: 1 MLVLFLLGTVFLLCPYWGELHDPIKATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVE 60
Query: 61 NFYILTRKGQSMYHYSKLSCMTSCEDINFLGFTKRVELICCDHSNYCNLPEGV 113
NFYILTRKGQSMYHYSKLSCMTSCEDINFLGFTKRVELICCDHSNYCNLPEGV
Sbjct: 61 NFYILTRKGQSMYHYSKLSCMTSCEDINFLGFTKRVELICCDHSNYCNLPEGV 113
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 37.4 bits (85), Expect = 0.003
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 24 IKATEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMT 82
+ T + CY C + G C +C ++ Q C ++ + +G + + C
Sbjct: 39 LPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCEN 93
Query: 83 SCEDINFLGFTKRVELICCDHSNYCN 108
C +N R+++ICC + ++CN
Sbjct: 94 MCPSMNLFSHGTRMQIICCRNQSFCN 119
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 131 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 185
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 186 SMNLFSHGTRMQIICCRNQSFCN 208
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 97 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 151
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 152 SMNLFSHGTRMQIICCRNQSFCN 174
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 186 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 240
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 241 SMNLFSHGTRMQIICCRNQSFCN 263
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 91 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 145
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 146 SMNLFSHGTRMQIICCRNQSFCN 168
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 116 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 170
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 171 SMNLFSHGTRMQIICCRNQSFCN 193
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 167 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 221
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
+N R+++ICC + ++CN
Sbjct: 222 SMNLFSHGTRMQIICCRNQSFCN 244
>gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo
sapiens]
Length = 81
Score = 30.4 bits (67), Expect = 0.32
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 80 CMTSCEDINFLGFTKRVELICCDHSNYCN 108
C C +N R+++ICC + ++CN
Sbjct: 51 CENMCPSMNLFSHGTRMQIICCRNQSFCN 79
>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
sapiens]
Length = 155
Score = 30.4 bits (67), Expect = 0.32
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 80 CMTSCEDINFLGFTKRVELICCDHSNYCN 108
C C +N R+++ICC + ++CN
Sbjct: 125 CENMCPSMNLFSHGTRMQIICCRNQSFCN 153
>gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo sapiens]
Length = 1503
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 12 LLCPYWGELHDPIKATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQS 71
LLC + +L +K ++ CYE LG G +K K +EN + R G
Sbjct: 1276 LLCQEYKDLQKMMKVVQVACYEI----LGEFSG-----EIKKKYILEIENVREVQRAGIL 1326
Query: 72 MYHYSKLSCMTSCEDINFLGFTKRVELICCDHS 104
+ L S + +N + F V L+ DH+
Sbjct: 1327 FFRIMLLELQESIQLLNSMEF---VSLLLYDHT 1356
>gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 32 YECKKYHLGLCYGVMTSCSLKHKQSC 57
Y+C+K HL LC T C + +SC
Sbjct: 51 YKCEKCHLVLCSPKQTECGHRFCESC 76
>gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo
sapiens]
Length = 543
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 32 YECKKYHLGLCYGVMTSCSLKHKQSC 57
Y+C+K HL LC T C + +SC
Sbjct: 51 YKCEKCHLVLCSPKQTECGHRFCESC 76
>gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 32 YECKKYHLGLCYGVMTSCSLKHKQSC 57
Y+C+K HL LC T C + +SC
Sbjct: 51 YKCEKCHLVLCSPKQTECGHRFCESC 76
>gi|239757212 PREDICTED: similar to hCG1773661 [Homo sapiens]
Length = 1119
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 25 KATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLS 79
K C +C K M SC ++HK+ +N Y +G++ +S L+
Sbjct: 43 KKKTFKCIKCSKSFF------MLSCLIRHKRIHIRQNIYKCEERGKAFKSFSTLT 91
>gi|239751718 PREDICTED: similar to hCG1773661 [Homo sapiens]
Length = 1119
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 25 KATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLS 79
K C +C K M SC ++HK+ +N Y +G++ +S L+
Sbjct: 43 KKKTFKCIKCSKSFF------MLSCLIRHKRIHIRQNIYKCEERGKAFKSFSTLT 91
>gi|239746221 PREDICTED: hypothetical protein XP_002343677 [Homo
sapiens]
Length = 1119
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 25 KATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLS 79
K C +C K M SC ++HK+ +N Y +G++ +S L+
Sbjct: 43 KKKTFKCIKCSKSFF------MLSCLIRHKRIHIRQNIYKCEERGKAFKSFSTLT 91
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 26.2 bits (56), Expect = 6.0
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 26 ATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
A I C++C + G +G S L+ C +L+ + + +K+ C C
Sbjct: 54 AEAIWCHQCTGFG-GCSHG---SRCLRDSTHCVTTATRVLSNT-EDLPLVTKM-CHIGCP 107
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
DI LG V + CC ++ CN
Sbjct: 108 DIPSLGLGPYVSIACC-QTSLCN 129
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 26.2 bits (56), Expect = 6.0
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 26 ATEIMCYECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
A I C++C + G +G S L+ C +L+ + + +K+ C C
Sbjct: 20 AEAIWCHQCTGFG-GCSHG---SRCLRDSTHCVTTATRVLSNT-EDLPLVTKM-CHIGCP 73
Query: 86 DINFLGFTKRVELICCDHSNYCN 108
DI LG V + CC ++ CN
Sbjct: 74 DIPSLGLGPYVSIACC-QTSLCN 95
>gi|122937512 myosin VIIB [Homo sapiens]
Length = 2116
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 33 ECKKYHLGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCEDIN 88
E + YH+ C ++ S + KQ +L+ S YHY + TSCE +N
Sbjct: 248 EERNYHIFYC--MLMGVSAEDKQ--------LLSLGTPSEYHYLTMGNCTSCEGLN 293
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.142 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,636,503
Number of Sequences: 37866
Number of extensions: 192116
Number of successful extensions: 452
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 439
Number of HSP's gapped (non-prelim): 20
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.