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Search of human proteins with 46852178
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46852178 potassium channel modulatory factor 1 [Homo
sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46852178 potassium channel modulatory factor 1 [Homo sapiens] 769 0.0
gi|8923898 zinc finger protein 313 [Homo sapiens] 63 4e-10
gi|30520320 ring finger protein 166 [Homo sapiens] 62 9e-10
gi|38045934 ring finger protein 138 isoform 2 [Homo sapiens] 61 1e-09
gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens] 60 3e-09
gi|21264330 mindbomb homolog 2 [Homo sapiens] 54 2e-07
gi|126032348 hect domain and RLD 2 [Homo sapiens] 50 3e-06
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 47 3e-05
gi|5032295 dystrophin Dp116 isoform [Homo sapiens] 47 3e-05
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 47 3e-05
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 47 3e-05
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 47 3e-05
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 47 3e-05
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 47 3e-05
gi|5032299 dystrophin Dp71b isoform [Homo sapiens] 47 3e-05
gi|5032297 dystrophin Dp71 isoform [Homo sapiens] 47 3e-05
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 47 3e-05
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 47 3e-05
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 47 3e-05
gi|30348954 mindbomb homolog 1 [Homo sapiens] 46 6e-05
gi|214830451 sequestosome 1 isoform 2 [Homo sapiens] 44 3e-04
gi|214830438 sequestosome 1 isoform 2 [Homo sapiens] 44 3e-04
gi|4505571 sequestosome 1 isoform 1 [Homo sapiens] 44 3e-04
gi|37595555 ring finger protein 125 [Homo sapiens] 43 4e-04
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens] 43 5e-04
gi|5032303 dystrophin Dp71ab isoform [Homo sapiens] 43 5e-04
gi|5032301 dystrophin Dp71a isoform [Homo sapiens] 43 5e-04
gi|157364926 dystrotelin [Homo sapiens] 43 5e-04
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap... 42 0.001
gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens] 42 0.001
>gi|46852178 potassium channel modulatory factor 1 [Homo sapiens]
Length = 381
Score = 770 bits (1987), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVD 60
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVD
Sbjct: 1 MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVD 60
Query: 61 FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD 120
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
Sbjct: 61 FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD 120
Query: 121 PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGG 180
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGG
Sbjct: 121 PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGG 180
Query: 181 LSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQH 240
LSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQH
Sbjct: 181 LSSSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQH 240
Query: 241 AQAARQQLETARNATRRTNTSSVTTTITQSTATTNIANTESSQQTLQNSQFLLTRLNDPK 300
AQAARQQLETARNATRRTNTSSVTTTITQSTATTNIANTESSQQTLQNSQFLLTRLNDPK
Sbjct: 241 AQAARQQLETARNATRRTNTSSVTTTITQSTATTNIANTESSQQTLQNSQFLLTRLNDPK 300
Query: 301 MSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDDRGEMADFGAMGCVDIMPLDV 360
MSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDDRGEMADFGAMGCVDIMPLDV
Sbjct: 301 MSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDDRGEMADFGAMGCVDIMPLDV 360
Query: 361 ALENLNLKESNKGNEPPPPPL 381
ALENLNLKESNKGNEPPPPPL
Sbjct: 361 ALENLNLKESNKGNEPPPPPL 381
>gi|8923898 zinc finger protein 313 [Homo sapiens]
Length = 228
Score = 63.2 bits (152), Expect = 4e-10
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 71 SVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAA 130
+V +F CPYC + + + L EH H+ + V+CPICA++P GDPN+ + +F
Sbjct: 134 NVPNRYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICASMPWGDPNYRSANFRE 193
Query: 131 HLTLEHRAPRD 141
H+ HR D
Sbjct: 194 HIQRRHRFSYD 204
>gi|30520320 ring finger protein 166 [Homo sapiens]
Length = 237
Score = 62.0 bits (149), Expect = 9e-10
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 71 SVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAA 130
++ +F CPYCG + L +H H V+CPIC+A+P GDP++ + +F
Sbjct: 143 NIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSAMPWGDPSYKSANFLQ 202
Query: 131 HLTLEHRAPRD 141
HL H+ D
Sbjct: 203 HLLHRHKFSYD 213
>gi|38045934 ring finger protein 138 isoform 2 [Homo sapiens]
Length = 151
Score = 61.2 bits (147), Expect = 1e-09
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 33 CASCYESGATTTRHTT-DHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTET 91
C C E T R T H + + D Y S P +F CP C + +T
Sbjct: 18 CPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHP-TFKCPLCQESNFTRQ 76
Query: 92 SLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHR 137
L +H S H V CPIC +LP GDP+ +T +F +HL H+
Sbjct: 77 RLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQ 122
>gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens]
Length = 245
Score = 60.1 bits (144), Expect = 3e-09
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 77 SFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
+F CP C + +T L +H S H V CPIC +LP GDP+ +T +F +HL H
Sbjct: 156 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRH 215
Query: 137 R 137
+
Sbjct: 216 Q 216
>gi|21264330 mindbomb homolog 2 [Homo sapiens]
Length = 1013
Score = 54.3 bits (129), Expect = 2e-07
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTD 49
RH + CD C K RG R+KC +C DYDLC CY H D
Sbjct: 143 RHPNIICDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFD 189
>gi|126032348 hect domain and RLD 2 [Homo sapiens]
Length = 4834
Score = 50.4 bits (119), Expect = 3e-06
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHT 47
S H GV+CD C G R+KC C D+D C +C+++ TRHT
Sbjct: 2701 SIHPGVTCDGCQMFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHT 2746
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 3299 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 3357
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 3358 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 3412
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 3413 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 3469
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 3470 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 3529
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 3530 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 3589
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 3590 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 3649
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 3650 E------VMEQLNNSFPSSRG 3664
>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
Length = 956
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 578 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 636
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 637 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 691
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 692 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 748
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 749 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 808
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 809 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 868
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 869 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 928
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 929 E------VMEQLNNSFPSSRG 943
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 1963 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 2021
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 2022 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 2076
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 2077 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 2133
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 2134 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 2193
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 2194 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 2253
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 2254 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 2313
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 2314 E------VMEQLNNSFPSSRG 2328
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 1966 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 2024
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 2025 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 2079
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 2080 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 2136
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 2137 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 2196
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 2197 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 2256
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 2257 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 2316
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 2317 E------VMEQLNNSFPSSRG 2331
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 3184 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 3242
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 3243 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 3297
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 3298 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 3354
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 3355 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 3414
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 3415 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 3474
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 3475 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 3534
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 3535 E------VMEQLNNSFPSSRG 3549
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 3303 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 3361
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 3362 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 3416
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 3417 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 3473
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 3474 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 3533
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 3534 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 3593
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 3594 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 3653
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 3654 E------VMEQLNNSFPSSRG 3668
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 847 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 905
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 906 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 960
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 961 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 1017
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 1018 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 1077
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 1078 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 1137
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 1138 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 1197
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 1198 E------VMEQLNNSFPSSRG 1212
>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
Length = 635
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 239 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 297
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 298 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 352
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 353 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 409
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 410 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 469
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 470 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 529
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 530 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 589
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 590 E------VMEQLNNSFPSSRG 604
>gi|5032297 dystrophin Dp71 isoform [Homo sapiens]
Length = 617
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 239 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 297
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 298 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 352
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 353 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 409
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 410 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 469
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 470 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 529
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 530 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 589
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 590 E------VMEQLNNSFPSSRG 604
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 847 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 905
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 906 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 960
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 961 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 1017
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 1018 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 1077
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 1078 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 1137
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 1138 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 1197
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 1198 E------VMEQLNNSFPSSRG 1212
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 3184 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 3242
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 3243 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 3297
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 3298 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 3354
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 3355 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 3414
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 3415 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 3474
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 3475 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 3534
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 3535 E------VMEQLNNSFPSSRG 3549
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 47.0 bits (110), Expect = 3e-05
Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 55/381 (14%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 3307 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 3365
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVI--CPICA 114
D+ + V + + T Y K MGY +Q + ++ ET +I P+ +
Sbjct: 3366 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMETPVTLINFWPVDS 3420
Query: 115 ALPGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRR 153
A P P DD H +EH A R +++ S+G ++H +
Sbjct: 3421 A-PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQ 3477
Query: 154 MFHPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 3478 SLNQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLS 3537
Query: 213 ---AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTI 267
+ ++ + P + + +L + +L RQH AR Q+ N + + +
Sbjct: 3538 PLPSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLL 3597
Query: 268 TQSTAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQ 321
Q A T +++ +S Q +SQ +L R+ + S++ + + S D S ++
Sbjct: 3598 EQPQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLE 3657
Query: 322 ELLLSTLVREESSSSDEDDRG 342
E V E+ ++S RG
Sbjct: 3658 E------VMEQLNNSFPSSRG 3672
>gi|30348954 mindbomb homolog 1 [Homo sapiens]
Length = 1006
Score = 45.8 bits (107), Expect = 6e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 3 RHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRH 46
+H+G CD C + G R+KC C +YDLC CY RH
Sbjct: 79 KHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRH 122
>gi|214830451 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 4 HEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESG 40
H V CD C G G RYKC +C DYDLC+ C G
Sbjct: 39 HPNVICDGC-NGPVVGTRYKCSVCPDYDLCSVCEGKG 74
>gi|214830438 sequestosome 1 isoform 2 [Homo sapiens]
Length = 356
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 4 HEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESG 40
H V CD C G G RYKC +C DYDLC+ C G
Sbjct: 39 HPNVICDGC-NGPVVGTRYKCSVCPDYDLCSVCEGKG 74
>gi|4505571 sequestosome 1 isoform 1 [Homo sapiens]
Length = 440
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 4 HEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESG 40
H V CD C G G RYKC +C DYDLC+ C G
Sbjct: 123 HPNVICDGC-NGPVVGTRYKCSVCPDYDLCSVCEGKG 158
>gi|37595555 ring finger protein 125 [Homo sapiens]
Length = 232
Score = 43.1 bits (100), Expect = 4e-04
Identities = 31/149 (20%), Positives = 51/149 (34%), Gaps = 26/149 (17%)
Query: 7 VSCDACLKGNFRGRRYKCLICY-------------------DYDLCASCYESGATTTRHT 47
V C +C+ + + ++ C C +Y CA C +
Sbjct: 55 VFCRSCIATSLKNNKWTCPYCRAYLPSEGVPATDVAKRMKSEYKNCAECDTLVCLSEMRA 114
Query: 48 TDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTE 107
Q + + YG E CP+C + Y E SL +H + H
Sbjct: 115 HIRTCQKYIDK------YGPLQELEETAARCVCPFCQRELY-EDSLLDHCITHHRSERRP 167
Query: 108 VICPICAALPGGDPNHVTDDFAAHLTLEH 136
V CP+C +P +P+ + HL + H
Sbjct: 168 VFCPLCRLIPDENPSSFSGSLIRHLQVSH 196
>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
Length = 1230
Score = 42.7 bits (99), Expect = 5e-04
Identities = 82/379 (21%), Positives = 144/379 (37%), Gaps = 64/379 (16%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 847 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 905
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVICPICAAL 116
D+ + V + + T Y K MGY +Q + ++ ET
Sbjct: 906 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMET------------ 948
Query: 117 PGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRRMF 155
P P DD H +EH A R +++ S+G ++H +
Sbjct: 949 PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL 1006
Query: 156 HPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS-- 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 1007 NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL 1066
Query: 213 -AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTITQ 269
+ ++ + P + + +L + +L RQH AR Q+ N + + + Q
Sbjct: 1067 PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ 1126
Query: 270 STAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQEL 323
A T +++ +S Q +SQ +L R+ + S++ + + S D S ++E
Sbjct: 1127 PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEE- 1185
Query: 324 LLSTLVREESSSSDEDDRG 342
V E+ ++S RG
Sbjct: 1186 -----VMEQLNNSFPSSRG 1199
>gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]
Length = 622
Score = 42.7 bits (99), Expect = 5e-04
Identities = 82/379 (21%), Positives = 144/379 (37%), Gaps = 64/379 (16%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 239 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 297
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVICPICAAL 116
D+ + V + + T Y K MGY +Q + ++ ET
Sbjct: 298 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMET------------ 340
Query: 117 PGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRRMF 155
P P DD H +EH A R +++ S+G ++H +
Sbjct: 341 PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL 398
Query: 156 HPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS-- 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 399 NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL 458
Query: 213 -AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTITQ 269
+ ++ + P + + +L + +L RQH AR Q+ N + + + Q
Sbjct: 459 PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ 518
Query: 270 STAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQEL 323
A T +++ +S Q +SQ +L R+ + S++ + + S D S ++E
Sbjct: 519 PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEE- 577
Query: 324 LLSTLVREESSSSDEDDRG 342
V E+ ++S RG
Sbjct: 578 -----VMEQLNNSFPSSRG 591
>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
Length = 604
Score = 42.7 bits (99), Expect = 5e-04
Identities = 82/379 (21%), Positives = 144/379 (37%), Gaps = 64/379 (16%)
Query: 2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM--QCILTRV 59
++H+ C+ C + G RY+ L ++YD+C SC+ SG H +PM C T
Sbjct: 239 AKHQA-KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTS 297
Query: 60 DFDLYYGGEAFSVEQPQSFTCPYCGK---MGYTETSLQEHVTSEHAETSTEVICPICAAL 116
D+ + V + + T Y K MGY +Q + ++ ET
Sbjct: 298 GEDV---RDFAKVLKNKFRTKRYFAKHPRMGY--LPVQTVLEGDNMET------------ 340
Query: 117 PGGDPNHVTDDFAAHLTLEHRAPR--DLDESSG-------------------VRHVRRMF 155
P P DD H +EH A R +++ S+G ++H +
Sbjct: 341 PASSPQLSHDD--THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSL 398
Query: 156 HPGRGLGGPRA-RRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVRRS-- 212
+ L PR+ + + S G L + NR L Q S
Sbjct: 399 NQDSPLSQPRSPAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPL 458
Query: 213 -AGGQLNSSGPSASQLQQLQMQLQLERQH--AQAARQQLETARNATRRTNTSSVTTTITQ 269
+ ++ + P + + +L + +L RQH AR Q+ N + + + Q
Sbjct: 459 PSPPEMMPTSPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQ 518
Query: 270 STAT-----TNIANTESSQQTLQNSQFLLTRLNDPKMSET-ERQSMESERADRSLFVQEL 323
A T +++ +S Q +SQ +L R+ + S++ + + S D S ++E
Sbjct: 519 PQAEAKVNGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEE- 577
Query: 324 LLSTLVREESSSSDEDDRG 342
V E+ ++S RG
Sbjct: 578 -----VMEQLNNSFPSSRG 591
>gi|157364926 dystrotelin [Homo sapiens]
Length = 578
Score = 42.7 bits (99), Expect = 5e-04
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM 52
C C G RY+CL C ++D+C C+ SG + H HP+
Sbjct: 228 CTLCRTFPITGLRYRCLKCLNFDICQMCFLSGLHSKSHQKSHPV 271
>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
Length = 2961
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 8 SCDACLKGNFRGRRYKCLICYDYDLCASCYES-----GATTTRHTTDHPMQCI 55
+CD C +G GRR C +C D+DLC CY + G T T HPM I
Sbjct: 1831 TCDHC-QGLIIGRRMNCNVCDDFDLCYGCYAAKKYSYGHLPTHSITAHPMVTI 1882
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPM 52
+SCD C + RY+CL C D DLC +C+ G H DH M
Sbjct: 1781 ISCDGCDE-IAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHEM 1825
>gi|42717999 dystrobrevin alpha isoform 2 [Homo sapiens]
Length = 686
Score = 41.6 bits (96), Expect = 0.001
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 7 VSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQ 53
V C C + G RY+C C++Y LC C+ G H+ H M+
Sbjct: 241 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMK 287
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,225,073
Number of Sequences: 37866
Number of extensions: 683291
Number of successful extensions: 4872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 4283
Number of HSP's gapped (non-prelim): 809
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.