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Search of human proteins with 4557269
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens]
(484 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens] 969 0.0
gi|183227688 adenylosuccinate lyase isoform b [Homo sapiens] 798 0.0
gi|19743875 fumarate hydratase precursor [Homo sapiens] 46 9e-05
gi|6912630 interferon-induced protein with tetratricopeptide rep... 33 0.58
gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent R... 32 1.3
gi|208022639 hypothetical protein LOC130162 isoform 2 [Homo sapi... 31 2.2
gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo sapi... 31 2.2
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 31 2.9
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 31 2.9
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 31 2.9
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 31 2.9
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 31 2.9
gi|5032285 dystrophin Dp427l isoform [Homo sapiens] 31 2.9
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 31 2.9
gi|157502179 tetratricopeptide repeat domain 21A isoform 1 [Homo... 30 4.9
gi|157502177 tetratricopeptide repeat domain 21A isoform 2 [Homo... 30 4.9
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 30 6.4
gi|76096366 phospholipase B1 [Homo sapiens] 30 6.4
gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Hom... 29 8.4
gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [H... 29 8.4
gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [H... 29 8.4
>gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens]
Length = 484
Score = 969 bits (2504), Expect = 0.0
Identities = 484/484 (100%), Positives = 484/484 (100%)
Query: 1 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE 60
MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
Sbjct: 1 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE 60
Query: 61 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD 120
QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
Sbjct: 61 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD 120
Query: 121 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC 180
LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
Sbjct: 121 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC 180
Query: 181 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG 240
MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
Sbjct: 181 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG 240
Query: 241 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR 300
QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
Sbjct: 241 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR 300
Query: 301 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE 360
SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
Sbjct: 301 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE 360
Query: 361 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGD 420
GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGD
Sbjct: 361 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGD 420
Query: 421 NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKPYESVMKVKA 480
NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKPYESVMKVKA
Sbjct: 421 NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKPYESVMKVKA 480
Query: 481 ELCL 484
ELCL
Sbjct: 481 ELCL 484
>gi|183227688 adenylosuccinate lyase isoform b [Homo sapiens]
Length = 425
Score = 798 bits (2060), Expect = 0.0
Identities = 397/397 (100%), Positives = 397/397 (100%)
Query: 1 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE 60
MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
Sbjct: 1 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE 60
Query: 61 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD 120
QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
Sbjct: 61 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD 120
Query: 121 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC 180
LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
Sbjct: 121 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC 180
Query: 181 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG 240
MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
Sbjct: 181 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG 240
Query: 241 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR 300
QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
Sbjct: 241 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR 300
Query: 301 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE 360
SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
Sbjct: 301 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE 360
Query: 361 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQ 397
GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQ
Sbjct: 361 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQ 397
Score = 63.2 bits (152), Expect = 5e-10
Identities = 30/31 (96%), Positives = 31/31 (100%)
Query: 454 SQQVQRFLEEEVYPLLKPYESVMKVKAELCL 484
S+QVQRFLEEEVYPLLKPYESVMKVKAELCL
Sbjct: 395 SRQVQRFLEEEVYPLLKPYESVMKVKAELCL 425
>gi|19743875 fumarate hydratase precursor [Homo sapiens]
Length = 510
Score = 45.8 bits (107), Expect = 9e-05
Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 22/293 (7%)
Query: 129 DLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKR 188
++LLP L ++ L +KE A + +G TH Q A T+G+ ++Q + + +K
Sbjct: 205 EVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKA 264
Query: 189 VRDDLRFRGVKGT-TGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYTRKV 247
+ GT GT G + ++ +K+ + A +T +
Sbjct: 265 AMPRIYELAAGGTAVGT---------GLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEAL 315
Query: 248 D-----IEVLSVLASLGASVHKICTDIRLL-----ANLKEMEEPFEKQQIGSSAMPYKRN 297
+E+ + + S+ KI DIR L + L E+ P + + GSS MP K N
Sbjct: 316 AAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILP--ENEPGSSIMPGKVN 373
Query: 298 PMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQN 357
P + E +A +M + S FE + + L A L D ++ +N
Sbjct: 374 PTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTEN 433
Query: 358 ISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQA 410
G+ + I + + + L + N + KA + H+ L + A
Sbjct: 434 CVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETA 486
>gi|6912630 interferon-induced protein with tetratricopeptide
repeats 5 [Homo sapiens]
Length = 482
Score = 33.1 bits (74), Expect = 0.58
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 369 IERRIRQELPFMATE------NIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGDND 422
+E I Q+L F+ T+ N++ + G +D E + +QA +++QE D +
Sbjct: 34 VEDTIGQQLEFLTTKSRLALYNLLAYVKHLKGQNKDALECL----EQAEEIIQQEHSDKE 89
Query: 423 LIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKP 471
+ + ++ ++ +D L + +TG+ ++ Y L P
Sbjct: 90 EVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECP 138
>gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac
exchange factor 1 [Homo sapiens]
Length = 1659
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 49 AEQTLGLPITDEQIQEMKSN---LENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGI 105
AE+ LP+ E+ + +S+ ++ + FK+A E+++ HD M++ ++ C +
Sbjct: 1121 AEEASSLPLVSEESEMDRSDHGGIKKVCFKVAEEDQEDSGHDTMSYRDSYSECNSNRDSV 1180
Query: 106 I---HLGATSCYVGDN 118
+ + + S Y+G +
Sbjct: 1181 LSYTSVRSNSSYLGSD 1196
>gi|208022639 hypothetical protein LOC130162 isoform 2 [Homo
sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 2.2
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 397 QDCHEKIRVLSQQAASVVKQEGGD--NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRAS 454
Q CH++++++SQ +S VK + D +E+IQ Y ++ L++ + +
Sbjct: 110 QFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEA 169
Query: 455 QQVQRFLE 462
+ + ++E
Sbjct: 170 EIMLHYIE 177
>gi|208022637 hypothetical protein LOC130162 isoform 1 [Homo
sapiens]
Length = 586
Score = 31.2 bits (69), Expect = 2.2
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 397 QDCHEKIRVLSQQAASVVKQEGGD--NDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRAS 454
Q CH++++++SQ +S VK + D +E+IQ Y ++ L++ + +
Sbjct: 232 QFCHQRLQIISQALSSWVKSDMSSPFQDFVEQIQKTKYLQGDQGIVEELMEDDPRRAKEA 291
Query: 455 QQVQRFLE 462
+ + ++E
Sbjct: 292 EIMLHYIE 299
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 2186 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 2245
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 2246 KLLV---EELPLRQGILKQLNETG 2266
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 850 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 909
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 910 KLLV---EELPLRQGILKQLNETG 930
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 853 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 912
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 913 KLLV---EELPLRQGILKQLNETG 933
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 2071 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 2130
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 2131 KLLV---EELPLRQGILKQLNETG 2151
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 2190 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 2249
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 2250 KLLV---EELPLRQGILKQLNETG 2270
>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
Length = 3562
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 2071 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 2130
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 2131 KLLV---EELPLRQGILKQLNETG 2151
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 25 EMCFVFSDRYKF------------RTWRQLWLWLAEAEQTLGLPITDEQIQEMKSNLENI 72
E+C SDR K R + LWL EA+ +P+ + Q++K LE +
Sbjct: 2194 EVCKQLSDRKKRLEEQKNILSEFQRDLNEFVLWLEEADNIASIPLEPGKEQQLKEKLEQV 2253
Query: 73 DFKMAAEEEKRLRHDVMAHVHTFG 96
+ EE LR ++ ++ G
Sbjct: 2254 KLLV---EELPLRQGILKQLNETG 2274
>gi|157502179 tetratricopeptide repeat domain 21A isoform 1 [Homo
sapiens]
Length = 1321
Score = 30.0 bits (66), Expect = 4.9
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 170 KRCCLWIQDLCMDLQ-NLKRVRDDLRFRGVKGTTGTQAS-FLQLFEGDDHKVEQLDKMVT 227
KRC + ++ +L+ +LK +R + V GT A FL L D E +D+M+
Sbjct: 84 KRCEIIDREAIQELEYSLKEIR-----KTVSGTALYYAGLFLWLIGRHDKAKEYIDRMLK 138
Query: 228 EKAGFKRAFIITG-------QTYTRKVDIEVL 252
GF+ A+++ G + +T K IE L
Sbjct: 139 ISRGFREAYVLRGWVDLTSDKPHTAKKAIEYL 170
>gi|157502177 tetratricopeptide repeat domain 21A isoform 2 [Homo
sapiens]
Length = 1320
Score = 30.0 bits (66), Expect = 4.9
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 170 KRCCLWIQDLCMDLQ-NLKRVRDDLRFRGVKGTTGTQAS-FLQLFEGDDHKVEQLDKMVT 227
KRC + ++ +L+ +LK +R + V GT A FL L D E +D+M+
Sbjct: 84 KRCEIIDREAIQELEYSLKEIR-----KTVSGTALYYAGLFLWLIGRHDKAKEYIDRMLK 138
Query: 228 EKAGFKRAFIITG-------QTYTRKVDIEVL 252
GF+ A+++ G + +T K IE L
Sbjct: 139 ISRGFREAYVLRGWVDLTSDKPHTAKKAIEYL 170
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 29.6 bits (65), Expect = 6.4
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 59 DEQIQEMKSNLENIDFKMAAEEEKRLRHDV 88
++Q++EMK+ LE ++ ++ A E+ +LR +V
Sbjct: 1531 EQQVEEMKTQLEELEDELQATEDAKLRLEV 1560
>gi|76096366 phospholipase B1 [Homo sapiens]
Length = 1458
Score = 29.6 bits (65), Expect = 6.4
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 124 LRNALDLLLPKLARVISRLADFAKERASLPT-LGFTHFQPAQLTTVGKRCCLWIQDLCMD 182
LRNALD+L ++ RV+ L DF LG P Q +V C L +++ +
Sbjct: 881 LRNALDVLHREVPRVLVNLVDFLNPTIMRQVFLGNPDKCPVQQASVLCNCVLTLRENSQE 940
Query: 183 LQNL----KRVRDDLRFRGVKGTTGTQASF 208
L L + R +R G TQ F
Sbjct: 941 LARLEAFSRAYRSSMRELVGSGRYDTQEDF 970
>gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 245 RKVDIEVLSVLASLGASVHKICTDIRLLANLKEM-EEPFEKQQ 286
R+V + ++L +L S HK+C D+R ANLK++ +E EK++
Sbjct: 113 RRVRMSADAMLKALLGSKHKVCMDLR--ANLKQVKKEDTEKER 153
>gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [Homo
sapiens]
Length = 182
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 245 RKVDIEVLSVLASLGASVHKICTDIRLLANLKEM-EEPFEKQQ 286
R+V + ++L +L S HK+C D+R ANLK++ +E EK++
Sbjct: 113 RRVRMSADAMLKALLGSKHKVCMDLR--ANLKQVKKEDTEKER 153
>gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 245 RKVDIEVLSVLASLGASVHKICTDIRLLANLKEM-EEPFEKQQ 286
R+V + ++L +L S HK+C D+R ANLK++ +E EK++
Sbjct: 113 RRVRMSADAMLKALLGSKHKVCMDLR--ANLKQVKKEDTEKER 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,801,259
Number of Sequences: 37866
Number of extensions: 670923
Number of successful extensions: 1737
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1732
Number of HSP's gapped (non-prelim): 22
length of query: 484
length of database: 18,247,518
effective HSP length: 106
effective length of query: 378
effective length of database: 14,233,722
effective search space: 5380346916
effective search space used: 5380346916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.