Name: TIMP1 | Sequence: fasta or formatted (207aa) | NCBI GI: 4507509 | |
Description: tissue inhibitor of metalloproteinase 1 precursor
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.2 15 2 C cysteine 5.8 12 1 D aspartate 2.4 5 1 E glutamate 4.8 10 2 F phenylalanine 5.3 11 1 G glycine 6.3 13 1 H histidine 2.9 6 1 I isoleucine 4.3 9 1 K lysine 3.9 8 1 L leucine 11.6 24 4 M methionine 1.9 4 1 N asparagine 1.9 4 1 P proline 6.3 13 2 Q glutamine 5.8 12 1 R arginine 5.3 11 2 S serine 7.2 15 1 T threonine 7.7 16 2 V valine 4.3 9 1 W tryptophan 1.9 4 1 Y tyrosine 2.9 6 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 tissue inhibitor of metalloproteinase 1 precursor [Ho... TIMP2 0.325 TIMP metallopeptidase inhibitor 2 precursor TIMP3 0.301 tissue inhibitor of metalloproteinase 3 precursor [Ho... TIMP4 0.279 tissue inhibitor of metalloproteinase 4 precursor [Ho... PLXNA2 0.015 plexin A2 MPN2 0.012 marapsin 2 P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 1 pr... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pr... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pre... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 2 pre... P4HA2 0.010 prolyl 4-hydroxylase, alpha II subunit isoform 1 prec... SLC4A4 0.010 solute carrier family 4, sodium bicarbonate cotrans... SLC4A4 0.010 solute carrier family 4, sodium bicarbonate cotranspo... SLC4A4 0.010 solute carrier family 4, sodium bicarbonate cotrans... CRB2 0.007 crumbs homolog 2 LOC100292628 0.005 PREDICTED: hypothetical protein ADAMDEC1 0.005 ADAM-like, decysin 1 isoform 1 ADAMDEC1 0.005 ADAM-like, decysin 1 isoform 2 ADAMDEC1 0.005 ADAM-like, decysin 1 isoform 2Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.