Guide to the Human Genome
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Search of human proteins with 4506549

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506549 ribonuclease, RNase A family, 2 (liver,
eosinophil-derived neurotoxin) [Homo sapiens]
         (161 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506549 ribonuclease, RNase A family, 2 (liver, eosinophil-de...   346   6e-96
gi|45243507 ribonuclease, RNase A family, 3 (eosinophil cationic...   238   2e-63
gi|21687143 ribonuclease, RNase A family, 8 [Homo sapiens]            124   5e-29
gi|153252081 ribonuclease, RNase A family, 7 [Homo sapiens]           119   9e-28
gi|5032045 ribonuclease, RNase A family, k6 [Homo sapiens]            119   1e-27
gi|38201686 pancreatic ribonuclease precursor [Homo sapiens]           70   6e-13
gi|38201684 pancreatic ribonuclease precursor [Homo sapiens]           70   6e-13
gi|4506547 pancreatic ribonuclease precursor [Homo sapiens]            70   6e-13
gi|38201682 pancreatic ribonuclease precursor [Homo sapiens]           70   6e-13
gi|4506557 ribonuclease, RNase A family, 4 precursor [Homo sapiens]    53   1e-07
gi|37577172 ribonuclease, RNase A family, 4 precursor [Homo sapi...    53   1e-07
gi|148277046 angiogenin, ribonuclease, RNase A family, 5 precurs...    40   9e-04
gi|4557313 angiogenin, ribonuclease, RNase A family, 5 precursor...    40   9e-04
gi|67459908 ribonuclease, RNase A family, 12 (non-active) [Homo ...    37   0.010
gi|160333428 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|160333420 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|160333415 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|160333409 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|160333406 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|160333401 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|111607480 ribonuclease, RNase A family, 9 (non-active) isofor...    36   0.016
gi|7661950 SH2 domain binding protein 1 [Homo sapiens]                 28   3.4  
gi|148529025 pleckstrin homology domain containing, family G (wi...    28   4.5  
gi|31377562 HAUS augmin-like complex, subunit 6 [Homo sapiens]         27   5.8  
gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]            27   5.8  
gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]         27   5.8  

>gi|4506549 ribonuclease, RNase A family, 2 (liver,
           eosinophil-derived neurotoxin) [Homo sapiens]
          Length = 161

 Score =  346 bits (887), Expect = 6e-96
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY 60
           MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY
Sbjct: 1   MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY 60

Query: 61  QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI 120
           QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI
Sbjct: 61  QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI 120

Query: 121 SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
           SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
Sbjct: 121 SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161


>gi|45243507 ribonuclease, RNase A family, 3 (eosinophil cationic
           protein) [Homo sapiens]
          Length = 160

 Score =  238 bits (606), Expect = 2e-63
 Identities = 111/161 (68%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 1   MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY 60
           MVPKLFTSQICLLLLLGL+ VEGSLH +PPQFT AQWF  QHI++   +CT AM+ INNY
Sbjct: 1   MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY 60

Query: 61  QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI 120
           + RCKNQNTFL TTFANVVNVCGN ++ CP N+T  NCH S  +VPL+HC+L  P  QNI
Sbjct: 61  RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI 120

Query: 121 SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
           SNC YA  P   FY+VACDNRD  RD P+YPVVPVHLD  I
Sbjct: 121 SNCTYADRPGRRFYVVACDNRDP-RDSPRYPVVPVHLDTTI 160


>gi|21687143 ribonuclease, RNase A family, 8 [Homo sapiens]
          Length = 154

 Score =  124 bits (310), Expect = 5e-29
 Identities = 66/150 (44%), Positives = 85/150 (56%), Gaps = 7/150 (4%)

Query: 12  LLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFL 71
           LLLLLGL   E  +  KP   T +QWF+TQH+  + Q C +AM +IN Y  RCK+ NTFL
Sbjct: 12  LLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQPSPQACNSAMSIINKYTERCKDLNTFL 71

Query: 72  LTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPAN 131
              F++V   C  PN+ C    + KNCH S   + L    LT+       NCRY +   N
Sbjct: 72  HEPFSSVAITCQTPNIAC--KNSCKNCHQSHGPMSLTMGELTS---GKYPNCRYKEKHLN 126

Query: 132 MFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
             YIVACD   Q    P YP+VPVHLD+++
Sbjct: 127 TPYIVACDPPQQ--GDPGYPLVPVHLDKVV 154


>gi|153252081 ribonuclease, RNase A family, 7 [Homo sapiens]
          Length = 156

 Score =  119 bits (299), Expect = 9e-28
 Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 6/152 (3%)

Query: 10  ICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNT 69
           + LLLLLGL   E  +  KP   T +QWF+ QH+  + Q C +AM+ IN + +RCK+ NT
Sbjct: 11  LLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINKHTKRCKDLNT 70

Query: 70  FLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTP 129
           FL   F++V   C  P + C +    KNCH S   V L  C LT+       NCRY +  
Sbjct: 71  FLHEPFSSVAATCQTPKIACKNGD--KNCHQSHGAVSLTMCKLTS---GKYPNCRYKEKR 125

Query: 130 ANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
            N  Y+VAC    Q++D  Q+ +VPVHLDR++
Sbjct: 126 QNKSYVVAC-KPPQKKDSQQFHLVPVHLDRVL 156


>gi|5032045 ribonuclease, RNase A family, k6 [Homo sapiens]
          Length = 150

 Score =  119 bits (297), Expect = 1e-27
 Identities = 71/156 (45%), Positives = 88/156 (56%), Gaps = 12/156 (7%)

Query: 10  ICLLLLLGLLAVEGS---LHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKN 66
           +C  LLL LL + G    LH  P + T A WFE QHI  +  QC  AM  INNY + CK+
Sbjct: 3   LCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQPSPLQCNRAMSGINNYTQHCKH 62

Query: 67  QNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPS-PQNISNCRY 125
           QNTFL  +F NV  VC   ++ C +   R NCH S   V +  C LT+   PQ    CRY
Sbjct: 63  QNTFLHDSFQNVAAVCDLLSIVCKNR--RHNCHQSSKPVNMTDCRLTSGKYPQ----CRY 116

Query: 126 AQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
           +      F+IVACD   Q+ DPP Y +VPVHLD I+
Sbjct: 117 SAAAQYKFFIVACD-PPQKSDPP-YKLVPVHLDSIL 150


>gi|38201686 pancreatic ribonuclease precursor [Homo sapiens]
          Length = 156

 Score = 70.5 bits (171), Expect = 6e-13
 Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 19/157 (12%)

Query: 8   SQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM------TSQQCTNAMQVINNYQ 61
           S + LLLL+ +L V G +     + + A+ F+ QH++       +S  C   M+  N  Q
Sbjct: 6   SLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQ 65

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
            RCK  NTF+     +V NVC    +TC +   + NC+ S S + +  C LT  S     
Sbjct: 66  GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNG--QGNCYKSNSSMHITDCRLTNGS--RYP 121

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NC Y  +P     IVAC+           P VPVH D
Sbjct: 122 NCAYRTSPKERHIIVACEGS---------PYVPVHFD 149


>gi|38201684 pancreatic ribonuclease precursor [Homo sapiens]
          Length = 156

 Score = 70.5 bits (171), Expect = 6e-13
 Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 19/157 (12%)

Query: 8   SQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM------TSQQCTNAMQVINNYQ 61
           S + LLLL+ +L V G +     + + A+ F+ QH++       +S  C   M+  N  Q
Sbjct: 6   SLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQ 65

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
            RCK  NTF+     +V NVC    +TC +   + NC+ S S + +  C LT  S     
Sbjct: 66  GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNG--QGNCYKSNSSMHITDCRLTNGS--RYP 121

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NC Y  +P     IVAC+           P VPVH D
Sbjct: 122 NCAYRTSPKERHIIVACEGS---------PYVPVHFD 149


>gi|4506547 pancreatic ribonuclease precursor [Homo sapiens]
          Length = 156

 Score = 70.5 bits (171), Expect = 6e-13
 Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 19/157 (12%)

Query: 8   SQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM------TSQQCTNAMQVINNYQ 61
           S + LLLL+ +L V G +     + + A+ F+ QH++       +S  C   M+  N  Q
Sbjct: 6   SLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQ 65

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
            RCK  NTF+     +V NVC    +TC +   + NC+ S S + +  C LT  S     
Sbjct: 66  GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNG--QGNCYKSNSSMHITDCRLTNGS--RYP 121

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NC Y  +P     IVAC+           P VPVH D
Sbjct: 122 NCAYRTSPKERHIIVACEGS---------PYVPVHFD 149


>gi|38201682 pancreatic ribonuclease precursor [Homo sapiens]
          Length = 156

 Score = 70.5 bits (171), Expect = 6e-13
 Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 19/157 (12%)

Query: 8   SQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM------TSQQCTNAMQVINNYQ 61
           S + LLLL+ +L V G +     + + A+ F+ QH++       +S  C   M+  N  Q
Sbjct: 6   SLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQ 65

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
            RCK  NTF+     +V NVC    +TC +   + NC+ S S + +  C LT  S     
Sbjct: 66  GRCKPVNTFVHEPLVDVQNVCFQEKVTCKNG--QGNCYKSNSSMHITDCRLTNGS--RYP 121

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NC Y  +P     IVAC+           P VPVH D
Sbjct: 122 NCAYRTSPKERHIIVACEGS---------PYVPVHFD 149


>gi|4506557 ribonuclease, RNase A family, 4 precursor [Homo sapiens]
          Length = 147

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 21/157 (13%)

Query: 7   TSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM-----TSQQCTNAMQVINNYQ 61
           T  + LLLLL LL + G +     Q    Q F  QH++      + + C   MQ      
Sbjct: 6   THSLLLLLLLTLLGL-GLVQPSYGQDGMYQRFLRQHVHPEETGGSDRYCNLMMQRRKMTL 64

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
             CK  NTF+     N+ ++C   N+ C + K   NCH     V +  C  T  S     
Sbjct: 65  YHCKRFNTFIHEDIWNIRSICSTTNIQCKNGK--MNCHE--GVVKVTDCRDTGSS--RAP 118

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NCRY    +    ++AC+           P VPVH D
Sbjct: 119 NCRYRAIASTRRVVIACEGN---------PQVPVHFD 146


>gi|37577172 ribonuclease, RNase A family, 4 precursor [Homo
           sapiens]
          Length = 147

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 21/157 (13%)

Query: 7   TSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINM-----TSQQCTNAMQVINNYQ 61
           T  + LLLLL LL + G +     Q    Q F  QH++      + + C   MQ      
Sbjct: 6   THSLLLLLLLTLLGL-GLVQPSYGQDGMYQRFLRQHVHPEETGGSDRYCNLMMQRRKMTL 64

Query: 62  RRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNIS 121
             CK  NTF+     N+ ++C   N+ C + K   NCH     V +  C  T  S     
Sbjct: 65  YHCKRFNTFIHEDIWNIRSICSTTNIQCKNGK--MNCHE--GVVKVTDCRDTGSS--RAP 118

Query: 122 NCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLD 158
           NCRY    +    ++AC+           P VPVH D
Sbjct: 119 NCRYRAIASTRRVVIACEGN---------PQVPVHFD 146


>gi|148277046 angiogenin, ribonuclease, RNase A family, 5 precursor
           [Homo sapiens]
          Length = 147

 Score = 40.0 bits (92), Expect = 9e-04
 Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 26/157 (16%)

Query: 10  ICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQ-----QCTNAMQVINNYQRRC 64
           + L+ +LGL     +L     ++T    F TQH +   Q      C + M+        C
Sbjct: 8   LLLVFVLGLGLTPPTLAQDNSRYTH---FLTQHYDAKPQGRDDRYCESIMRR-RGLTSPC 63

Query: 65  KNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCR 124
           K+ NTF+     ++  +C N N     N  R+N   S S   +  C L   SP     C+
Sbjct: 64  KDINTFIHGNKRSIKAICENKN----GNPHRENLRISKSSFQVTTCKLHGGSPW--PPCQ 117

Query: 125 YAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
           Y  T      +VAC+N            +PVHLD+ I
Sbjct: 118 YRATAGFRNVVVACENG-----------LPVHLDQSI 143


>gi|4557313 angiogenin, ribonuclease, RNase A family, 5 precursor
           [Homo sapiens]
          Length = 147

 Score = 40.0 bits (92), Expect = 9e-04
 Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 26/157 (16%)

Query: 10  ICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQ-----QCTNAMQVINNYQRRC 64
           + L+ +LGL     +L     ++T    F TQH +   Q      C + M+        C
Sbjct: 8   LLLVFVLGLGLTPPTLAQDNSRYTH---FLTQHYDAKPQGRDDRYCESIMRR-RGLTSPC 63

Query: 65  KNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCR 124
           K+ NTF+     ++  +C N N     N  R+N   S S   +  C L   SP     C+
Sbjct: 64  KDINTFIHGNKRSIKAICENKN----GNPHRENLRISKSSFQVTTCKLHGGSPW--PPCQ 117

Query: 125 YAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 161
           Y  T      +VAC+N            +PVHLD+ I
Sbjct: 118 YRATAGFRNVVVACENG-----------LPVHLDQSI 143


>gi|67459908 ribonuclease, RNase A family, 12 (non-active) [Homo
           sapiens]
          Length = 147

 Score = 36.6 bits (83), Expect = 0.010
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 13/118 (11%)

Query: 25  LHVKPPQFTWAQWFETQHINMTSQQCTNAM--QVINNYQRRCKNQNTFLLTTFANVVNVC 82
           LHV  PQ           + + ++ C + +  +VI      CK ++ F+      +  +C
Sbjct: 30  LHVDYPQ---------NDVPVPARYCNHMIIQRVIREPDHTCKKEHVFIHERPRKINGIC 80

Query: 83  GNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDN 140
            +P      N +   C  S ++  +  C L   +      CRY  +P   F +V CD+
Sbjct: 81  ISPKKVACQNLSAIFCFQSETKFKMTVCQLIEGT--RYPACRYHYSPTEGFVLVTCDD 136


>gi|160333428 ribonuclease, RNase A family, 9 (non-active) isoform 1
           [Homo sapiens]
          Length = 210

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 99  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 154

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 155 IPACKYESLYRKGYVLITCSWQNEMQKRIP 184


>gi|160333420 ribonuclease, RNase A family, 9 (non-active) isoform 1
           [Homo sapiens]
          Length = 210

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 99  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 154

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 155 IPACKYESLYRKGYVLITCSWQNEMQKRIP 184


>gi|160333415 ribonuclease, RNase A family, 9 (non-active) isoform 1
           [Homo sapiens]
          Length = 210

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 99  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 154

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 155 IPACKYESLYRKGYVLITCSWQNEMQKRIP 184


>gi|160333409 ribonuclease, RNase A family, 9 (non-active) isoform 1
           [Homo sapiens]
          Length = 210

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 99  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 154

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 155 IPACKYESLYRKGYVLITCSWQNEMQKRIP 184


>gi|160333406 ribonuclease, RNase A family, 9 (non-active) isoform 2
           [Homo sapiens]
          Length = 205

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 94  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 149

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 150 IPACKYESLYRKGYVLITCSWQNEMQKRIP 179


>gi|160333401 ribonuclease, RNase A family, 9 (non-active) isoform 2
           [Homo sapiens]
          Length = 205

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 94  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 149

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 150 IPACKYESLYRKGYVLITCSWQNEMQKRIP 179


>gi|111607480 ribonuclease, RNase A family, 9 (non-active) isoform 2
           [Homo sapiens]
          Length = 205

 Score = 35.8 bits (81), Expect = 0.016
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 60  YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 119
           Y+ R   ++ FLL  +  +  +C N  + C  N  RK C+ S   V  ++CNLT      
Sbjct: 94  YKHRWVAEHYFLLMQYDELQKICYNRFVPC-KNGIRK-CNRSKGLVEGVYCNLT--EAFE 149

Query: 120 ISNCRYAQTPANMFYIVAC--DNRDQRRDP 147
           I  C+Y       + ++ C   N  Q+R P
Sbjct: 150 IPACKYESLYRKGYVLITCSWQNEMQKRIP 179


>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
          Length = 1173

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 37  WFETQHINMTSQQCTNAMQVINNYQRR-CKNQNTFLLTTFANVVNVCG 83
           W    HI +  +Q  +A+Q+  N  R+  K+QNT ++   A  +  CG
Sbjct: 684 WLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCG 731


>gi|148529025 pleckstrin homology domain containing, family G (with
            RhoGef domain) member 4B [Homo sapiens]
          Length = 1271

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 12   LLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFL 71
            L+L      VEGS  V    + + Q F+T  I MT     + ++    ++RR K+Q+T++
Sbjct: 1028 LILFSKTQKVEGSHDV----YLYKQSFKTAEIGMTENVGDSGLRFEIWFRRRRKSQDTYI 1083

Query: 72   L 72
            L
Sbjct: 1084 L 1084


>gi|31377562 HAUS augmin-like complex, subunit 6 [Homo sapiens]
          Length = 955

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 92  NKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDP 147
           +K R+  + S SQ P  H    +P+PQN+      QT   + ++  CD   +   P
Sbjct: 845 SKKREESYLSNSQTPERHKPELSPTPQNV------QTDDTLNFLDTCDLHTEHIKP 894


>gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 353

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 79  VNVCGNPNM--TCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQ 118
           V  C +PN+  +      R  CH + SQ P  H NL T  P+
Sbjct: 309 VGRCSDPNLGLSWRQEAARAWCHCTSSQYPFEHPNLPTHLPK 350


>gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]
          Length = 1494

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 45   MTSQQCTNAMQVINNYQRRCKNQNTF-LLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGS 103
            +++ Q T+   ++NN Q    NQ    LL  + N+    G   + CP+N     C     
Sbjct: 958  LSNHQLTHLQSLLNNNQMFPPNQQQQQLLQGYQNLQAFQGQSTIPCPANNNPMACLFQNF 1017

Query: 104  QV 105
            QV
Sbjct: 1018 QV 1019


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.134    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,010,706
Number of Sequences: 37866
Number of extensions: 308623
Number of successful extensions: 873
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 828
Number of HSP's gapped (non-prelim): 27
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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