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Search of human proteins with 4506193
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506193 proteasome beta 1 subunit [Homo sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506193 proteasome beta 1 subunit [Homo sapiens] 481 e-136
gi|22538465 proteasome beta 3 subunit [Homo sapiens] 84 1e-16
gi|4506195 proteasome beta 2 subunit [Homo sapiens] 64 9e-11
gi|4506201 proteasome beta 5 subunit isoform 1 [Homo sapiens] 56 3e-08
gi|23110925 proteasome beta 6 subunit [Homo sapiens] 53 3e-07
gi|153791216 proteasome beta 11 subunit [Homo sapiens] 51 8e-07
gi|4506191 proteasome beta 10 subunit proprotein [Homo sapiens] 51 1e-06
gi|4506203 proteasome beta 7 subunit proprotein [Homo sapiens] 49 4e-06
gi|73747875 proteasome beta 8 subunit isoform E2 proprotein [Hom... 47 1e-05
gi|4758970 proteasome beta 8 subunit isoform E1 proprotein [Homo... 47 1e-05
gi|23110932 proteasome beta 9 subunit isoform 2 proprotein [Homo... 47 2e-05
gi|4506205 proteasome beta 9 subunit isoform 1 proprotein [Homo ... 47 2e-05
gi|195539356 proteasome beta 5 subunit isoform 2 [Homo sapiens] 44 2e-04
gi|222144262 proteasome beta 5 subunit isoform 3 [Homo sapiens] 39 0.004
gi|68303563 proteasome alpha 8 subunit isoform 2 [Homo sapiens] 33 0.22
gi|68303565 proteasome alpha 8 subunit isoform 3 [Homo sapiens] 32 0.38
gi|4506189 proteasome alpha 7 subunit [Homo sapiens] 31 0.84
gi|23110944 proteasome alpha 6 subunit [Homo sapiens] 31 0.84
gi|4758216 dishevelled 2 [Homo sapiens] 31 0.84
gi|41406097 dishevelled 3 [Homo sapiens] 31 0.84
gi|68303561 proteasome alpha 8 subunit isoform 1 [Homo sapiens] 29 3.2
gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens] 29 4.2
gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B... 28 7.1
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 28 9.3
>gi|4506193 proteasome beta 1 subunit [Homo sapiens]
Length = 241
Score = 481 bits (1239), Expect = e-136
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MLSSTAMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEG 60
MLSSTAMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEG
Sbjct: 1 MLSSTAMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEG 60
Query: 61 FSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML 120
FSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML
Sbjct: 61 FSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAML 120
Query: 121 STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQ 180
STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQ
Sbjct: 121 STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQ 180
Query: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRK 240
VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRK
Sbjct: 181 VGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRK 240
Query: 241 D 241
D
Sbjct: 241 D 241
>gi|22538465 proteasome beta 3 subunit [Homo sapiens]
Length = 205
Score = 83.6 bits (205), Expect = 1e-16
Identities = 52/209 (24%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
+NGG ++A+ G++ +A+D R + T D K + + D+ IG +G D T+ +
Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 65
Query: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG-KGAVYSFD 153
++ RL +Y+ + + + +M++ +LY +RF PYY +I GLD + K + S D
Sbjct: 66 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 125
Query: 154 PVG-SYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
+G D F G+ + + + ++ ++ + +H+ ++ +AM ++A +
Sbjct: 126 LIGCPMVTDDFVVSGTCAEQMYGMCESL--WEPNMDPDHLFETISQAM-------LNAVD 176
Query: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
RD +G + + I+ K+ I T+ R D
Sbjct: 177 RDAVSGMGVIVHIIEKDKITTRTLKARMD 205
>gi|4506195 proteasome beta 2 subunit [Homo sapiens]
Length = 201
Score = 64.3 bits (155), Expect = 9e-11
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99
++ I G D+ +VASD + D K +K+++K ++ C G GD + + I+
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 100 LKMYKHSNNKAMTTGAIAAM----LSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPV 155
+++YK N ++ A A L+ L SR PY+V ++ G DE A+Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRT--PYHVNLLLAGYDEHEGPALYYMDYL 121
Query: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVP-LSLDRAMRLVKDVFISAAERD 214
+ + F A G + + +LD + P +S +RA+ L++ +R
Sbjct: 122 AALAKAPFAAHGYGAFLTLSILDRY----------YTPTISRERAVELLRKCLEELQKRF 171
Query: 215 VYTGDALRICIVTKEGIRE 233
+ + I+ K GI +
Sbjct: 172 ILNLPTFSVRIIDKNGIHD 190
>gi|4506201 proteasome beta 5 subunit isoform 1 [Homo sapiens]
Length = 263
Score = 55.8 bits (133), Expect = 3e-08
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
+ +G T LA IVA+D+R + G I ++ K ++ + +G DC
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWE 115
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
+++ + ++Y+ N + ++ A + +L+ ++Y + + +I G D+ G G +Y D
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPG-LYYVD 174
Query: 154 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
G+ + + GS S ++D + L +++A L + A R
Sbjct: 175 SEGNRISGATFSVGSGSVYAYGVMDRGYSY---------DLEVEQAYDLARRAIYQATYR 225
Query: 214 DVYTGDALRICIVTKEG 230
D Y+G A+ + V ++G
Sbjct: 226 DAYSGGAVNLYHVREDG 242
>gi|23110925 proteasome beta 6 subunit [Homo sapiens]
Length = 239
Score = 52.8 bits (125), Expect = 3e-07
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 10/203 (4%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
V G TI+A+ + ++ +D+R + G I R + K + D+ SG D +
Sbjct: 31 VSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVA 90
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
+ +L + N+ A++ + Y R II G D + G VYS
Sbjct: 91 DAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYRE-DLMAGIIIAGWDPQEGGQVYSVP 149
Query: 154 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
G R SF GGS S+ + +D ++ + ++ + A ER
Sbjct: 150 MGGMMVRQSFAIGGSGSSYIYGYVD---------ATYREGMTKEECLQFTANALALAMER 200
Query: 214 DVYTGDALRICIVTKEGIREETV 236
D +G +R+ + + G+ + +
Sbjct: 201 DGSSGGVIRLAAIAESGVERQVL 223
>gi|153791216 proteasome beta 11 subunit [Homo sapiens]
Length = 300
Score = 51.2 bits (121), Expect = 8e-07
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 10/199 (5%)
Query: 32 PYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLT 91
P + +G T LA I A+DTR S G + S K + + SG DC T
Sbjct: 44 PRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCAT 103
Query: 92 LTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYS 151
++++ L++ + + + + A +LS ++ R V + G D G Y
Sbjct: 104 WYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYV 163
Query: 152 FDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAA 211
+ Q D F GS S +LD G++ +S A L + A
Sbjct: 164 YSDGTRLQGDIFSV-GSGSPYAYGVLDR--GYR-------YDMSTQEAYALARCAVAHAT 213
Query: 212 ERDVYTGDALRICIVTKEG 230
RD Y+G ++ + V + G
Sbjct: 214 HRDAYSGGSVDLFHVRESG 232
>gi|4506191 proteasome beta 10 subunit proprotein [Homo sapiens]
Length = 273
Score = 50.8 bits (120), Expect = 1e-06
Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
Query: 37 GGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKII 96
G TI + +D I+ +DTR + + + K + + K +G D T+++
Sbjct: 39 GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMV 98
Query: 97 EARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYN-IIGGLDEEGKGAVYSFDPV 155
++++++ S + + +L L+ R+ + + I+GG+D G +Y P
Sbjct: 99 ASKMELHALSTGREPRVATVTRILRQTLF--RYQGHVGASLIVGGVDLTGP-QLYGVHPH 155
Query: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
GSY R F A GS +L+++ ++L+ A L+ + + D+
Sbjct: 156 GSYSRLPFTALGSGQDAALAVLEDRF---------QPNMTLEAAQGLLVEAVTAGILGDL 206
Query: 216 YTGDALRICIVTKEGIR 232
+G + C++TK G +
Sbjct: 207 GSGGNVDACVITKTGAK 223
>gi|4506203 proteasome beta 7 subunit proprotein [Homo sapiens]
Length = 277
Score = 48.9 bits (115), Expect = 4e-06
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 37 GGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKII 96
G TI + +D ++ +DTR +EG + ++ K + ++ +G D T++I
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 97 EARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYY-VYNIIGGLDEEGKGAVYSFDPV 155
+ L+++ S + ML +L+ R+ Y ++GG+D G +YS P
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGP-HLYSIYPH 159
Query: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
GS + + GS S + +++ + + A LV + + D+
Sbjct: 160 GSTDKLPYVTMGSGSLAAMAVFEDKF---------RPDMEEEEAKNLVSEAIAAGIFNDL 210
Query: 216 YTGDALRICIVTK---EGIREETVSLRK 240
+G + +C+++K + +R TV +K
Sbjct: 211 GSGSNIDLCVISKNKLDFLRPYTVPNKK 238
>gi|73747875 proteasome beta 8 subunit isoform E2 proprotein [Homo
sapiens]
Length = 276
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 36 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKI 95
+G T LA + I A D+R S G I K ++ + SG DC ++
Sbjct: 71 HGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERL 130
Query: 96 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPV 155
+ ++Y N + ++ A + +LS ++ R + ++I G D++G G +Y D
Sbjct: 131 LAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPG-LYYVDEH 189
Query: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
G+ + + GS + ++D+ G++ LS + A L + A RD
Sbjct: 190 GTRLSGNMFSTGSGNTYAYGVMDS--GYR-------PNLSPEEAYDLGRRAIAYATHRDS 240
Query: 216 YTGDALRICIVTKEG 230
Y+G + + + ++G
Sbjct: 241 YSGGVVNMYHMKEDG 255
>gi|4758970 proteasome beta 8 subunit isoform E1 proprotein [Homo
sapiens]
Length = 272
Score = 47.0 bits (110), Expect = 1e-05
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 36 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKI 95
+G T LA + I A D+R S G I K ++ + SG DC ++
Sbjct: 67 HGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERL 126
Query: 96 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPV 155
+ ++Y N + ++ A + +LS ++ R + ++I G D++G G +Y D
Sbjct: 127 LAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPG-LYYVDEH 185
Query: 156 GSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDV 215
G+ + + GS + ++D+ G++ LS + A L + A RD
Sbjct: 186 GTRLSGNMFSTGSGNTYAYGVMDS--GYR-------PNLSPEEAYDLGRRAIAYATHRDS 236
Query: 216 YTGDALRICIVTKEG 230
Y+G + + + ++G
Sbjct: 237 YSGGVVNMYHMKEDG 251
>gi|23110932 proteasome beta 9 subunit isoform 2 proprotein [Homo
sapiens]
Length = 209
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
V G TI+A+ + ++ SD+R+S G ++ R K L ++ SG D +
Sbjct: 7 VHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVA 66
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
+ +L+++ + A A ++ I Y R + ++ G D+ G VY
Sbjct: 67 DMAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVYG-T 124
Query: 154 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
G R F GGS S + +D +K +S + R D A R
Sbjct: 125 LGGMLTRQPFAIGGSGSTFIYGYVD--AAYK-------PGMSPEECRRFTTDAIALAMSR 175
Query: 214 DVYTGDALRICIVTKEGIREETV 236
D +G + + +T G+ +
Sbjct: 176 DGSSGGVIYLVTITAAGVDHRVI 198
>gi|4506205 proteasome beta 9 subunit isoform 1 proprotein [Homo
sapiens]
Length = 219
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
V G TI+A+ + ++ SD+R+S G ++ R K L ++ SG D +
Sbjct: 17 VHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVA 76
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
+ +L+++ + A A ++ I Y R + ++ G D+ G VY
Sbjct: 77 DMAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVYG-T 134
Query: 154 PVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
G R F GGS S + +D +K +S + R D A R
Sbjct: 135 LGGMLTRQPFAIGGSGSTFIYGYVD--AAYK-------PGMSPEECRRFTTDAIALAMSR 185
Query: 214 DVYTGDALRICIVTKEGIREETV 236
D +G + + +T G+ +
Sbjct: 186 DGSSGGVIYLVTITAAGVDHRVI 208
>gi|195539356 proteasome beta 5 subunit isoform 2 [Homo sapiens]
Length = 160
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 83 SGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLD 142
+G DC +++ + ++Y+ N + ++ A + +L+ ++Y + + +I G D
Sbjct: 2 AGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWD 61
Query: 143 EEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRL 202
+ G G +Y D G+ + + GS S ++D + L +++A L
Sbjct: 62 KRGPG-LYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYD---------LEVEQAYDL 111
Query: 203 VKDVFISAAERDVYTGDALRICIVTKEG 230
+ A RD Y+G A+ + V ++G
Sbjct: 112 ARRAIYQATYRDAYSGGAVNLYHVREDG 139
>gi|222144262 proteasome beta 5 subunit isoform 3 [Homo sapiens]
Length = 203
Score = 38.9 bits (89), Expect = 0.004
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
+ +G T LA IVA+D+R + G I ++ K ++ + +G DC
Sbjct: 56 MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWE 115
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
+++ + ++Y+ N + ++ A + +L+ ++Y + + +I G D+ G
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRG 167
>gi|68303563 proteasome alpha 8 subunit isoform 2 [Homo sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.22
Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
V G T + I G + ++ + + S R K L D + +G D +
Sbjct: 28 VKKGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAGLTADARVVI 86
Query: 94 KIIEARLKMYKHSNNKAMTTGAIAAMLSTI----LYSRRFFPYYVYNIIGGLDEEGKGAV 149
+ +K + +T I ++T+ S P+ + +I G D++G +
Sbjct: 87 NRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRL 146
Query: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Y DP G+Y A G ++ ++ L+
Sbjct: 147 YQTDPSGTYHAWKANAIGRSAKTVREFLE 175
>gi|68303565 proteasome alpha 8 subunit isoform 3 [Homo sapiens]
Length = 212
Score = 32.3 bits (72), Expect = 0.38
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 78 TVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTI----LYSRRFFPYY 133
T +G G D + + +K + +T I ++T+ S P+
Sbjct: 33 TAVGIRGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFG 92
Query: 134 VYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
+ +I G D++G +Y DP G+Y A G ++ ++ L+
Sbjct: 93 ISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLE 137
>gi|4506189 proteasome alpha 7 subunit [Homo sapiens]
Length = 248
Score = 31.2 bits (69), Expect = 0.84
Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 34 VFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLT 93
V G T + + G D ++ + + S R K L D + +G D +
Sbjct: 26 VKKGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDNVCMAFAGLTADARIVI 84
Query: 94 KIIEARLKMYKHSNNKAMT----TGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
+ ++ + +T T IA++ S P+ + +I G D +G +
Sbjct: 85 NRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRL 144
Query: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLD 178
Y DP G+Y A G + ++ L+
Sbjct: 145 YQTDPSGTYHAWKANAIGRGAKSVREFLE 173
>gi|23110944 proteasome alpha 6 subunit [Homo sapiens]
Length = 246
Score = 31.2 bits (69), Expect = 0.84
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 15/212 (7%)
Query: 37 GGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGC--SGFHGDCLTLTK 94
G T +A+ G+D A++ + ++ + + + +K+T+ IGC +G D + +
Sbjct: 36 GLTSVAVRGKDCAVIVTQKKVPDKL-LDSSTVTHLFKITEN--IGCVMTGMTADSRSQVQ 92
Query: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTI--LYSRR--FFPYYVYNIIGGLDEEGKGAVY 150
+K+ + + ++ I +Y++ P I+ G+DEE VY
Sbjct: 93 RARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVY 152
Query: 151 SFDPVGSYQRDSFKAGG----SASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDV 206
DP G Y A G +++ L+ + + + Q VE L + + D
Sbjct: 153 KCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSI--DF 210
Query: 207 FISAAERDVYTGDALRICIVTKEGIREETVSL 238
S E V T + + I+T+ I V+L
Sbjct: 211 KPSEIEVGVVTVENPKFRILTEAEIDAHLVAL 242
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 31.2 bits (69), Expect = 0.84
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 101 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQR 160
++ + S+ ++T ++ + T+ + + + +I+G +E G G +Y +GS +
Sbjct: 246 RLERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIY----IGSIMK 301
Query: 161 DSFKAGGSASAMLQP----LLDNQVGFKNMQNVEHVPLSLDRAMRLVKDV 206
A A ++P L N + F+NM N D A+R+++D+
Sbjct: 302 GGAVA---ADGRIEPGDMLLQVNDMNFENMSN--------DDAVRVLRDI 340
>gi|41406097 dishevelled 3 [Homo sapiens]
Length = 716
Score = 31.2 bits (69), Expect = 0.84
Identities = 23/110 (20%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 101 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQR 160
++ + S+ ++T ++ + T+ + + + +I+G +E G G +Y +GS +
Sbjct: 228 RIERSSSFSSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIY----IGSIMK 283
Query: 161 DSFKAGGSASAMLQP----LLDNQVGFKNMQNVEHVPLSLDRAMRLVKDV 206
A A ++P L N++ F+NM N D A+R+++++
Sbjct: 284 GGAVA---ADGRIEPGDMLLQVNEINFENMSN--------DDAVRVLREI 322
>gi|68303561 proteasome alpha 8 subunit isoform 1 [Homo sapiens]
Length = 256
Score = 29.3 bits (64), Expect = 3.2
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 113 TGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAM 172
T IA + S P+ + +I G D++G +Y DP G+Y A G ++
Sbjct: 116 TRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKT 175
Query: 173 LQPLLD 178
++ L+
Sbjct: 176 VREFLE 181
>gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]
Length = 6306
Score = 28.9 bits (63), Expect = 4.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 35 FNGGTILAIAGEDFAIVASDTRLSEG 60
F I AIAGED++I +SD L EG
Sbjct: 2154 FKAVPITAIAGEDYSIASSDVVLLEG 2179
>gi|125987585 leukocyte immunoglobulin-like receptor, subfamily B,
member 4 isoform 1 [Homo sapiens]
Length = 448
Score = 28.1 bits (61), Expect = 7.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Query: 18 EPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSP 69
EP G LQ R SP + GE+F +T+ +G + TR SP
Sbjct: 306 EPEPKDGGLQRRSSPAA-------DVQGENFCAAVKNTQPEDGVEMDTRQSP 350
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 27.7 bits (60), Expect = 9.3
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 92 LTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILY-----SRRFFPYYVYNIIGGLDEEGK 146
+T I+E R K +KHSNN A +S LY SRR Y V ++ G D G
Sbjct: 1259 VTSILELRNKEFKHSNNPAHKYYLAVDPVSGSLYVSDTNSRRI--YRVKSLSGTKDLAGN 1316
Query: 147 GAV 149
V
Sbjct: 1317 SEV 1319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,431,499
Number of Sequences: 37866
Number of extensions: 335064
Number of successful extensions: 674
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 25
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.